RNA–Protein interactions for RNA: ENST00000636540.1

SRP54-AS1-205, Transcript of SRP54 antisense RNA 1 (head to head), humanhuman

BASIC

Gene SRP54-AS1, Length 565 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-AS1-205ENST00000636540 NPC1L1Q9UHC9 1359 aa15.22■□□□□ 0.03
SRP54-AS1-205ENST00000636540 PER1O15534 1290 aaPredicted RBP15.21■□□□□ 0.03
SRP54-AS1-205ENST00000636540 TNNT2P45379 298 aaPredicted RBP15.21■□□□□ 0.03
SRP54-AS1-205ENST00000636540 NBPF6Q5VWK0 638 aa15.21■□□□□ 0.03
SRP54-AS1-205ENST00000636540 NBPF4Q96M43 638 aa15.21■□□□□ 0.03
SRP54-AS1-205ENST00000636540 PARD3Q8TEW0 1356 aa15.21■□□□□ 0.02
SRP54-AS1-205ENST00000636540 TOGARAM1Q9Y4F4 1720 aa15.2■□□□□ 0.02
SRP54-AS1-205ENST00000636540 EXOC5O00471 708 aa15.2■□□□□ 0.02
SRP54-AS1-205ENST00000636540 USHBP1Q8N6Y0 703 aa15.2■□□□□ 0.02
SRP54-AS1-205ENST00000636540 PPM1GO15355 546 aaPredicted RBP15.19■□□□□ 0.02
SRP54-AS1-205ENST00000636540 MORC1Q86VD1 984 aa15.19■□□□□ 0.02
SRP54-AS1-205ENST00000636540 EN1Q05925 392 aaPredicted RBP15.17■□□□□ 0.02
SRP54-AS1-205ENST00000636540 COL3A1P02461 1466 aaPredicted RBP15.16■□□□□ 0.02
SRP54-AS1-205ENST00000636540 PLEKHG2Q9H7P9 1386 aa15.16■□□□□ 0.02
SRP54-AS1-205ENST00000636540 EIF4A2Q14240 407 aaKnown RBP15.16■□□□□ 0.02
SRP54-AS1-205ENST00000636540 IGSF1Q8N6C5 1336 aa15.16■□□□□ 0.02
SRP54-AS1-205ENST00000636540 PAPPAQ13219 1627 aa15.15■□□□□ 0.02
SRP54-AS1-205ENST00000636540 APBA3O96018 575 aa15.15■□□□□ 0.02
SRP54-AS1-205ENST00000636540 CAMKK2Q96RR4 588 aa15.15■□□□□ 0.02
SRP54-AS1-205ENST00000636540 ITGB4P16144 1822 aa15.15■□□□□ 0.02
SRP54-AS1-205ENST00000636540 LY75O60449 1722 aa15.14■□□□□ 0.01
SRP54-AS1-205ENST00000636540 EZH2Q15910 746 aaKnown RBP15.14■□□□□ 0.01
SRP54-AS1-205ENST00000636540 CC2D1BQ5T0F9 858 aaKnown RBP15.14■□□□□ 0.01
SRP54-AS1-205ENST00000636540 PTF1AQ7RTS3 328 aa15.14■□□□□ 0.01
SRP54-AS1-205ENST00000636540 RAPGEF4Q8WZA2 1011 aa15.14■□□□□ 0.01
SRP54-AS1-205ENST00000636540 EYA1Q99502 592 aa15.14■□□□□ 0.01
SRP54-AS1-205ENST00000636540 BCL11BQ9C0K0 894 aaPredicted RBP15.14■□□□□ 0.01
SRP54-AS1-205ENST00000636540 KAT6BQ8WYB5 2073 aa15.13■□□□□ 0.01
SRP54-AS1-205ENST00000636540 DCAF8L1A6NGE4 600 aa15.13■□□□□ 0.01
SRP54-AS1-205ENST00000636540 ZCRB1Q8TBF4 217 aaKnown RBP15.13■□□□□ 0.01
SRP54-AS1-205ENST00000636540 LRP5O75197 1615 aa15.13■□□□□ 0.01
SRP54-AS1-205ENST00000636540 PCDH11XQ9BZA7 1347 aa15.13■□□□□ 0.01
SRP54-AS1-205ENST00000636540 PCDH11YQ9BZA8 1340 aa15.13■□□□□ 0.01
SRP54-AS1-205ENST00000636540 TATP17735 454 aaPredicted RBP15.12■□□□□ 0.01
SRP54-AS1-205ENST00000636540 KDRP35968 1356 aa15.11■□□□□ 0.01
SRP54-AS1-205ENST00000636540 PLSCR1O15162 318 aa15.1■□□□□ 0.01
SRP54-AS1-205ENST00000636540 KCNQ2O43526 872 aa15.1■□□□□ 0.01
SRP54-AS1-205ENST00000636540 DDX54Q8TDD1 881 aaKnown RBP15.1■□□□□ 0.01
SRP54-AS1-205ENST00000636540 ACSBG1Q96GR2 724 aa15.1■□□□□ 0.01
SRP54-AS1-205ENST00000636540 VIRMAQ69YN4 1812 aaKnown RBP15.1■□□□□ 0.01
SRP54-AS1-205ENST00000636540 CASZ1Q86V15 1759 aa15.09■□□□□ 0.01
SRP54-AS1-205ENST00000636540 MTHFSP49914 203 aa15.08■□□□□ 0
SRP54-AS1-205ENST00000636540 TUBGCP6Q96RT7 1819 aa15.08■□□□□ 0
SRP54-AS1-205ENST00000636540 QSER1Q2KHR3 1735 aa15.07■□□□□ 0
SRP54-AS1-205ENST00000636540 SRCAPQ6ZRS2 3230 aa15.07■□□□□ 0
SRP54-AS1-205ENST00000636540 CYP27B1O15528 508 aa15.07■□□□□ 0
SRP54-AS1-205ENST00000636540 IL13P35225 146 aa15.07■□□□□ 0
SRP54-AS1-205ENST00000636540 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.06■□□□□ 01e-12■□□□□ 8.4
SRP54-AS1-205ENST00000636540 C5P01031 1676 aa15.06■□□□□ 0
SRP54-AS1-205ENST00000636540 SCN11AQ9UI33 1791 aa15.06■□□□□ 0
SRP54-AS1-205ENST00000636540 AEBP1Q8IUX7 1158 aa15.05■□□□□ -0
SRP54-AS1-205ENST00000636540 ADAMTS7Q9UKP4 1686 aa15.05■□□□□ -0
SRP54-AS1-205ENST00000636540 TAF1LQ8IZX4 1826 aa15.05■□□□□ -0
SRP54-AS1-205ENST00000636540 ZEB1P37275 1124 aaPredicted RBP15.04■□□□□ -0
SRP54-AS1-205ENST00000636540 CNGB1Q14028 1251 aaPredicted RBP15.04■□□□□ -0
SRP54-AS1-205ENST00000636540 SPG7Q9UQ90 795 aa15.04■□□□□ -0
SRP54-AS1-205ENST00000636540 PSDA5PKW4 1024 aaPredicted RBP15.03■□□□□ -0
SRP54-AS1-205ENST00000636540 TXNRD1Q16881 649 aa15.03■□□□□ -0
SRP54-AS1-205ENST00000636540 PROM2Q8N271 834 aa15.03■□□□□ -0
SRP54-AS1-205ENST00000636540 ANO8Q9HCE9 1232 aaPredicted RBP15.03■□□□□ -0
SRP54-AS1-205ENST00000636540 KDM6AO15550 1401 aaPredicted RBP15.02■□□□□ -0
SRP54-AS1-205ENST00000636540 PRIM1P49642 420 aaKnown RBP15.02■□□□□ -0
SRP54-AS1-205ENST00000636540 R3HDM1Q15032 1099 aaKnown RBP15.02■□□□□ -0
SRP54-AS1-205ENST00000636540 NKX1-1Q15270 411 aaPredicted RBP15.02■□□□□ -0
SRP54-AS1-205ENST00000636540 SYTL4Q96C24 671 aaPredicted RBP15.02■□□□□ -0
SRP54-AS1-205ENST00000636540 DIAPH1O60610 1272 aaKnown RBP15.01□□□□□ -0.01
SRP54-AS1-205ENST00000636540 PHKG2P15735 406 aa15.01□□□□□ -0.01
SRP54-AS1-205ENST00000636540 SULT6B1Q6IMI4 303 aa15.01□□□□□ -0.01
SRP54-AS1-205ENST00000636540 MRC1P22897 1456 aa15.01□□□□□ -0.01
SRP54-AS1-205ENST00000636540 ZNF831Q5JPB2 1677 aa15□□□□□ -0.01
SRP54-AS1-205ENST00000636540 PPP2R1AP30153 589 aa15□□□□□ -0.01
SRP54-AS1-205ENST00000636540 IFNL2Q8IZJ0 200 aa14.99□□□□□ -0.01
SRP54-AS1-205ENST00000636540 CICQ96RK0 1608 aaPredicted RBP14.99□□□□□ -0.01
SRP54-AS1-205ENST00000636540 AMOTQ4VCS5 1084 aa14.98□□□□□ -0.01
SRP54-AS1-205ENST00000636540 NBPF14Q5TI25 921 aa14.98□□□□□ -0.01
SRP54-AS1-205ENST00000636540 PALLDQ8WX93 1383 aa14.98□□□□□ -0.01
SRP54-AS1-205ENST00000636540 C4BP0C0L5 1744 aa14.97□□□□□ -0.01
SRP54-AS1-205ENST00000636540 HMOX1P09601 288 aa14.97□□□□□ -0.01
SRP54-AS1-205ENST00000636540 PLEKHO1Q53GL0 409 aaPredicted RBP14.97□□□□□ -0.01
SRP54-AS1-205ENST00000636540 ZNF530Q6P9A1 599 aaPredicted RBP14.97□□□□□ -0.01
SRP54-AS1-205ENST00000636540 LRRC4BQ9NT99 713 aa14.97□□□□□ -0.01
SRP54-AS1-205ENST00000636540 COL5A3P25940 1745 aaPredicted RBP14.97□□□□□ -0.01
SRP54-AS1-205ENST00000636540 SIPA1L3O60292 1781 aaPredicted RBP14.96□□□□□ -0.01
SRP54-AS1-205ENST00000636540 SLC27A3Q5K4L6 730 aa14.96□□□□□ -0.01
SRP54-AS1-205ENST00000636540 UBR3Q6ZT12 1888 aa14.95□□□□□ -0.02
SRP54-AS1-205ENST00000636540 COL24A1Q17RW2 1714 aa14.95□□□□□ -0.02
SRP54-AS1-205ENST00000636540 CFAP53Q96M91 514 aa14.95□□□□□ -0.02
SRP54-AS1-205ENST00000636540 UBR2Q8IWV8 1755 aa14.94□□□□□ -0.02
SRP54-AS1-205ENST00000636540 HSP90AB1P08238 724 aaKnown RBP14.94□□□□□ -0.02
SRP54-AS1-205ENST00000636540 DDX10Q13206 875 aaKnown RBP14.94□□□□□ -0.02
SRP54-AS1-205ENST00000636540 ZNF827Q17R98 1081 aa14.94□□□□□ -0.02
SRP54-AS1-205ENST00000636540 MPRIPQ6WCQ1 1025 aa14.94□□□□□ -0.02
SRP54-AS1-205ENST00000636540 PIGBQ92521 554 aa14.94□□□□□ -0.02
SRP54-AS1-205ENST00000636540 DCAF5Q96JK2 942 aa14.94□□□□□ -0.02
SRP54-AS1-205ENST00000636540 TJP1Q07157 1748 aa14.94□□□□□ -0.02
SRP54-AS1-205ENST00000636540 U2SURPO15042 1029 aaKnown RBP14.93□□□□□ -0.02
SRP54-AS1-205ENST00000636540 SLC15A2Q16348 729 aa14.93□□□□□ -0.02
SRP54-AS1-205ENST00000636540 C1orf141Q5JVX7 400 aa14.93□□□□□ -0.02
SRP54-AS1-205ENST00000636540 STK32BQ9NY57 414 aa14.93□□□□□ -0.02
SRP54-AS1-205ENST00000636540 TMOD3Q9NYL9 352 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms