RNA–Protein interactions for RNA: ENST00000636525.1

CLN5-211, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-211ENST00000636525 ATF7IPQ6VMQ6 1270 aa23.49■■□□□ 1.35
CLN5-211ENST00000636525 KDRP35968 1356 aa23.48■■□□□ 1.35
CLN5-211ENST00000636525 BECN1Q14457 450 aa23.48■■□□□ 1.35
CLN5-211ENST00000636525 KRT24Q2M2I5 525 aa23.48■■□□□ 1.35
CLN5-211ENST00000636525 PKNOX2Q96KN3 472 aa23.48■■□□□ 1.35
CLN5-211ENST00000636525 VIRMAQ69YN4 1812 aaKnown RBP23.46■■□□□ 1.35
CLN5-211ENST00000636525 ZBTB7CA1YPR0 619 aa23.46■■□□□ 1.35
CLN5-211ENST00000636525 USHBP1Q8N6Y0 703 aa23.46■■□□□ 1.35
CLN5-211ENST00000636525 TWISTNBQ3B726 338 aaPredicted RBP23.45■■□□□ 1.34
CLN5-211ENST00000636525 ALDH1L2Q3SY69 923 aa23.45■■□□□ 1.34
CLN5-211ENST00000636525 LMOD2Q6P5Q4 547 aa23.44■■□□□ 1.34
CLN5-211ENST00000636525 C19orf44Q9H6X5 657 aa23.44■■□□□ 1.34
CLN5-211ENST00000636525 MIS18AQ9NYP9 233 aa23.44■■□□□ 1.34
CLN5-211ENST00000636525 USP54Q70EL1 1684 aa23.44■■□□□ 1.34
CLN5-211ENST00000636525 TMEM57Q8N5G2 664 aa23.44■■□□□ 1.34
CLN5-211ENST00000636525 TMEM94Q12767 1356 aa23.43■■□□□ 1.34
CLN5-211ENST00000636525 ITPRIPQ8IWB1 547 aa23.43■■□□□ 1.34
CLN5-211ENST00000636525 DDX17Q92841 729 aaKnown RBP23.42■■□□□ 1.34
CLN5-211ENST00000636525 MRPL50Q8N5N7 158 aaKnown RBP23.42■■□□□ 1.34
CLN5-211ENST00000636525 KIF16BQ96L93 1317 aa23.42■■□□□ 1.34
CLN5-211ENST00000636525 NFAT5O94916 1531 aa23.41■■□□□ 1.34
CLN5-211ENST00000636525 C1orf167Q5SNV9 1468 aa23.41■■□□□ 1.34
CLN5-211ENST00000636525 CHL1O00533 1208 aa23.41■■□□□ 1.34
CLN5-211ENST00000636525 STRCP1A6NGW2 1772 aa23.41■■□□□ 1.34
CLN5-211ENST00000636525 KIF24Q5T7B8 1368 aa23.41■■□□□ 1.34
CLN5-211ENST00000636525 SLKQ9H2G2 1235 aaPredicted RBP23.4■■□□□ 1.34
CLN5-211ENST00000636525 KRT28Q7Z3Y7 464 aa23.39■■□□□ 1.34
CLN5-211ENST00000636525 IP6K1Q92551 441 aa23.39■■□□□ 1.34
CLN5-211ENST00000636525 CRB1P82279 1406 aa23.39■■□□□ 1.34
CLN5-211ENST00000636525 KDM4FA0A1W2PPD8 638 aa23.38■■□□□ 1.33
CLN5-211ENST00000636525 GCP02774 474 aa23.38■■□□□ 1.33
CLN5-211ENST00000636525 ZNF428Q96B54 188 aa23.38■■□□□ 1.33
CLN5-211ENST00000636525 ANTXR1Q9H6X2 564 aa23.38■■□□□ 1.33
CLN5-211ENST00000636525 LTN1O94822 1766 aa23.38■■□□□ 1.33
CLN5-211ENST00000636525 BRPF1P55201 1214 aaPredicted RBP23.38■■□□□ 1.33
CLN5-211ENST00000636525 NBPF6Q5VWK0 638 aa23.38■■□□□ 1.33
CLN5-211ENST00000636525 NBPF4Q96M43 638 aa23.38■■□□□ 1.33
CLN5-211ENST00000636525 IPO8O15397 1037 aaKnown RBP23.37■■□□□ 1.33
CLN5-211ENST00000636525 SEC24BO95487 1268 aa23.36■■□□□ 1.33
CLN5-211ENST00000636525 LRRC59Q96AG4 307 aaKnown RBP23.36■■□□□ 1.33
CLN5-211ENST00000636525 CLCN1P35523 988 aa23.35■■□□□ 1.33
CLN5-211ENST00000636525 KCNH5Q8NCM2 988 aa23.35■■□□□ 1.33
CLN5-211ENST00000636525 RTF1Q92541 710 aaKnown RBP23.35■■□□□ 1.33
CLN5-211ENST00000636525 DDX19BQ9UMR2 479 aa23.35■■□□□ 1.33
CLN5-211ENST00000636525 ATF3P18847 181 aa23.35■■□□□ 1.33
CLN5-211ENST00000636525 AAMPQ13685 434 aa23.35■■□□□ 1.33
CLN5-211ENST00000636525 NAP1L5Q96NT1 182 aaPredicted RBP23.35■■□□□ 1.33
CLN5-211ENST00000636525 RTL1A6NKG5 1358 aa23.35■■□□□ 1.33
CLN5-211ENST00000636525 XRCC6P12956 609 aaKnown RBP eCLIP23.34■■□□□ 1.33
CLN5-211ENST00000636525 GOLGA6L3A6NEY3 463 aa23.34■■□□□ 1.33
CLN5-211ENST00000636525 GAS2L2Q8NHY3 880 aa23.34■■□□□ 1.33
CLN5-211ENST00000636525 ZBTB40Q9NUA8 1239 aa23.33■■□□□ 1.33
CLN5-211ENST00000636525 MST1RQ04912 1400 aa23.33■■□□□ 1.33
CLN5-211ENST00000636525 FSD2A1L4K1 749 aa23.33■■□□□ 1.33
CLN5-211ENST00000636525 ARHGEF25Q86VW2 580 aa23.33■■□□□ 1.33
CLN5-211ENST00000636525 AXIN2Q9Y2T1 843 aa23.32■■□□□ 1.32
CLN5-211ENST00000636525 IL17REQ8NFR9 667 aa23.31■■□□□ 1.32
CLN5-211ENST00000636525 TRPM3Q9HCF6 1732 aaPredicted RBP23.3■■□□□ 1.32
CLN5-211ENST00000636525 MSH6P52701 1360 aa23.3■■□□□ 1.32
CLN5-211ENST00000636525 GNAT3A8MTJ3 354 aa23.3■■□□□ 1.32
CLN5-211ENST00000636525 TSPYL4Q9UJ04 414 aa23.3■■□□□ 1.32
CLN5-211ENST00000636525 RRP9O43818 475 aaKnown RBP23.29■■□□□ 1.32
CLN5-211ENST00000636525 RWDD1Q9H446 243 aaPredicted RBP23.29■■□□□ 1.32
CLN5-211ENST00000636525 HSP90AA2PQ14568 343 aaPredicted RBP23.29■■□□□ 1.32
CLN5-211ENST00000636525 ARHGAP45Q92619 1136 aa23.29■■□□□ 1.32
CLN5-211ENST00000636525 HSP90AA1P07900 732 aaKnown RBP23.28■■□□□ 1.32
CLN5-211ENST00000636525 PDZRN3Q9UPQ7 1066 aa23.28■■□□□ 1.32
CLN5-211ENST00000636525 ZC3H6P61129 1189 aaKnown RBP23.28■■□□□ 1.32
CLN5-211ENST00000636525 VSIG10Q8N0Z9 540 aa23.28■■□□□ 1.32
CLN5-211ENST00000636525 SLIT3O75094 1523 aa23.27■■□□□ 1.32
CLN5-211ENST00000636525 ZBTB7BO15156 539 aaPredicted RBP23.27■■□□□ 1.32
CLN5-211ENST00000636525 KIAA0232Q92628 1395 aa23.27■■□□□ 1.32
CLN5-211ENST00000636525 LMTK3Q96Q04 1460 aa23.26■■□□□ 1.31
CLN5-211ENST00000636525 RGPD2P0DJD1 1756 aa23.26■■□□□ 1.31
CLN5-211ENST00000636525 ARXQ96QS3 562 aa23.26■■□□□ 1.31
CLN5-211ENST00000636525 C1orf115Q9H7X2 142 aa23.26■■□□□ 1.31
CLN5-211ENST00000636525 ABCC4O15439 1325 aa23.26■■□□□ 1.31
CLN5-211ENST00000636525 ZMYND15Q9H091 742 aa23.26■■□□□ 1.31
CLN5-211ENST00000636525 UPF2Q9HAU5 1272 aaKnown RBP23.26■■□□□ 1.31
CLN5-211ENST00000636525 MAP3K5Q99683 1374 aa23.25■■□□□ 1.31
CLN5-211ENST00000636525 CABLES1Q8TDN4 633 aa23.25■■□□□ 1.31
CLN5-211ENST00000636525 TBC1D2Q9BYX2 928 aa23.25■■□□□ 1.31
CLN5-211ENST00000636525 TBC1D32Q96NH3 1257 aa23.24■■□□□ 1.31
CLN5-211ENST00000636525 PANK2Q9BZ23 570 aa23.24■■□□□ 1.31
CLN5-211ENST00000636525 MCM4P33991 863 aa23.24■■□□□ 1.31
CLN5-211ENST00000636525 ANKRD24Q8TF21 1146 aa23.24■■□□□ 1.31
CLN5-211ENST00000636525 KIF1AQ12756 1690 aa23.23■■□□□ 1.31
CLN5-211ENST00000636525 HTATSF1O43719 755 aaKnown RBP23.23■■□□□ 1.31
CLN5-211ENST00000636525 CADPS2Q86UW7 1296 aa23.23■■□□□ 1.31
CLN5-211ENST00000636525 HDAC1Q13547 482 aaPredicted RBP23.23■■□□□ 1.31
CLN5-211ENST00000636525 LGR6Q9HBX8 967 aa23.22■■□□□ 1.31
CLN5-211ENST00000636525 MED1Q15648 1581 aaPredicted RBP23.22■■□□□ 1.31
CLN5-211ENST00000636525 DCCP43146 1447 aa23.21■■□□□ 1.31
CLN5-211ENST00000636525 PHRF1Q9P1Y6 1649 aaKnown RBP23.21■■□□□ 1.31
CLN5-211ENST00000636525 SLC4A2P04920 1241 aa23.21■■□□□ 1.31
CLN5-211ENST00000636525 ZNF335Q9H4Z2 1342 aaPredicted RBP23.21■■□□□ 1.31
CLN5-211ENST00000636525 RGS12O14924 1447 aa23.2■■□□□ 1.31
CLN5-211ENST00000636525 G2E3Q7L622 706 aa23.2■■□□□ 1.3
CLN5-211ENST00000636525 STRCQ7RTU9 1775 aa23.2■■□□□ 1.3
CLN5-211ENST00000636525 API5Q9BZZ5 524 aaKnown RBP23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms