RNA–Protein interactions for RNA: ENST00000636271.1

CHRNA7-212, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 1,974 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-212ENST00000636271 RIPK4P57078 832 aa20.22■□□□□ 0.83
CHRNA7-212ENST00000636271 BTG4Q9NY30 223 aa20.22■□□□□ 0.83
CHRNA7-212ENST00000636271 TRIM35Q9UPQ4 493 aa20.22■□□□□ 0.83
CHRNA7-212ENST00000636271 NCAPD2Q15021 1401 aa20.22■□□□□ 0.83
CHRNA7-212ENST00000636271 MSH5O43196 834 aa20.21■□□□□ 0.83
CHRNA7-212ENST00000636271 NFE2L2Q16236 605 aa20.21■□□□□ 0.83
CHRNA7-212ENST00000636271 STRN4Q9NRL3 753 aa20.21■□□□□ 0.83
CHRNA7-212ENST00000636271 WDR17Q8IZU2 1322 aa20.2■□□□□ 0.82
CHRNA7-212ENST00000636271 MTHFSDQ2M296 383 aaKnown RBP20.19■□□□□ 0.82
CHRNA7-212ENST00000636271 ANP32EQ9BTT0 268 aa20.19■□□□□ 0.82
CHRNA7-212ENST00000636271 KDM2BQ8NHM5 1336 aa20.19■□□□□ 0.82
CHRNA7-212ENST00000636271 LARP1Q6PKG0 1096 aaKnown RBP20.19■□□□□ 0.82
CHRNA7-212ENST00000636271 EVA1CP58658 441 aa20.17■□□□□ 0.82
CHRNA7-212ENST00000636271 TOM1L2Q6ZVM7 507 aa20.17■□□□□ 0.82
CHRNA7-212ENST00000636271 MYH16Q9H6N6 1097 aa20.17■□□□□ 0.82
CHRNA7-212ENST00000636271 MS4A1P11836 297 aa20.17■□□□□ 0.82
CHRNA7-212ENST00000636271 PDE3AQ14432 1141 aa20.17■□□□□ 0.82
CHRNA7-212ENST00000636271 CENPQQ7L2Z9 268 aaPredicted RBP20.17■□□□□ 0.82
CHRNA7-212ENST00000636271 COL14A1Q05707 1796 aaKnown RBP20.16■□□□□ 0.82
CHRNA7-212ENST00000636271 SPATA31A6Q5VVP1 1343 aa20.15■□□□□ 0.82
CHRNA7-212ENST00000636271 LRP6O75581 1613 aa20.14■□□□□ 0.82
CHRNA7-212ENST00000636271 FAM208AQ9UK61 1670 aaKnown RBP20.14■□□□□ 0.82
CHRNA7-212ENST00000636271 RARSP54136 660 aaKnown RBP20.14■□□□□ 0.81
CHRNA7-212ENST00000636271 THUMPD2Q9BTF0 503 aaKnown RBP20.14■□□□□ 0.81
CHRNA7-212ENST00000636271 CANXP27824 592 aaKnown RBP20.13■□□□□ 0.81
CHRNA7-212ENST00000636271 DCTN1Q14203 1278 aa20.13■□□□□ 0.81
CHRNA7-212ENST00000636271 CARD10Q9BWT7 1032 aa20.13■□□□□ 0.81
CHRNA7-212ENST00000636271 GAS2L2Q8NHY3 880 aa20.12■□□□□ 0.81
CHRNA7-212ENST00000636271 MEGF6O75095 1541 aa20.12■□□□□ 0.81
CHRNA7-212ENST00000636271 RAPGEF4Q8WZA2 1011 aa20.12■□□□□ 0.81
CHRNA7-212ENST00000636271 C8orf37Q96NL8 207 aa20.12■□□□□ 0.81
CHRNA7-212ENST00000636271 USP35Q9P2H5 1018 aa20.12■□□□□ 0.81
CHRNA7-212ENST00000636271 CRB1P82279 1406 aa20.1■□□□□ 0.81
CHRNA7-212ENST00000636271 SLIT2O94813 1529 aa20.1■□□□□ 0.81
CHRNA7-212ENST00000636271 MCM10Q7L590 875 aa20.1■□□□□ 0.81
CHRNA7-212ENST00000636271 PDE4AP27815 886 aa20.09■□□□□ 0.81
CHRNA7-212ENST00000636271 PLEKHO1Q53GL0 409 aaPredicted RBP20.09■□□□□ 0.81
CHRNA7-212ENST00000636271 NGLY1Q96IV0 654 aa20.09■□□□□ 0.81
CHRNA7-212ENST00000636271 PLCH1Q4KWH8 1693 aa20.09■□□□□ 0.81
CHRNA7-212ENST00000636271 CT47B1P0C2W7 299 aaPredicted RBP20.08■□□□□ 0.81
CHRNA7-212ENST00000636271 TATP17735 454 aaPredicted RBP20.08■□□□□ 0.81
CHRNA7-212ENST00000636271 FRAT1Q92837 279 aaPredicted RBP20.08■□□□□ 0.81
CHRNA7-212ENST00000636271 DLG5Q8TDM6 1919 aa20.08■□□□□ 0.81
CHRNA7-212ENST00000636271 IL16Q14005 1332 aa20.08■□□□□ 0.8
CHRNA7-212ENST00000636271 ANP32AP39687 249 aaKnown RBP20.08■□□□□ 0.8
CHRNA7-212ENST00000636271 AMOTQ4VCS5 1084 aa20.08■□□□□ 0.8
CHRNA7-212ENST00000636271 BACH2Q9BYV9 841 aa20.08■□□□□ 0.8
CHRNA7-212ENST00000636271 LMOD3Q0VAK6 560 aa20.07■□□□□ 0.8
CHRNA7-212ENST00000636271 ZNF530Q6P9A1 599 aaPredicted RBP20.07■□□□□ 0.8
CHRNA7-212ENST00000636271 PANK1Q8TE04 598 aa20.07■□□□□ 0.8
CHRNA7-212ENST00000636271 GNAT3A8MTJ3 354 aa20.06■□□□□ 0.8
CHRNA7-212ENST00000636271 SKAP1Q86WV1 359 aa20.06■□□□□ 0.8
CHRNA7-212ENST00000636271 COG6Q9Y2V7 657 aa20.06■□□□□ 0.8
CHRNA7-212ENST00000636271 BCL9LQ86UU0 1499 aa20.06■□□□□ 0.8
CHRNA7-212ENST00000636271 MAP3K5Q99683 1374 aa20.05■□□□□ 0.8
CHRNA7-212ENST00000636271 ERICH6Q7L0X2 663 aa20.05■□□□□ 0.8
CHRNA7-212ENST00000636271 FNBP4Q8N3X1 1017 aaPredicted RBP20.05■□□□□ 0.8
CHRNA7-212ENST00000636271 IL17REQ8NFR9 667 aa20.05■□□□□ 0.8
CHRNA7-212ENST00000636271 TSR2Q969E8 191 aaKnown RBP20.05■□□□□ 0.8
CHRNA7-212ENST00000636271 NRAPQ86VF7 1730 aa20.05■□□□□ 0.8
CHRNA7-212ENST00000636271 IL2RBP14784 551 aa20.04■□□□□ 0.8
CHRNA7-212ENST00000636271 UNC5CLQ8IV45 518 aa20.04■□□□□ 0.8
CHRNA7-212ENST00000636271 RTF1Q92541 710 aaKnown RBP20.04■□□□□ 0.8
CHRNA7-212ENST00000636271 CLUAP1Q96AJ1 413 aa20.04■□□□□ 0.8
CHRNA7-212ENST00000636271 BCL2L13Q9BXK5 485 aa20.04■□□□□ 0.8
CHRNA7-212ENST00000636271 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.04■□□□□ 0.8
CHRNA7-212ENST00000636271 OVOS2A0A0G2JMS6 1433 aa20.04■□□□□ 0.8
CHRNA7-212ENST00000636271 HTATSF1O43719 755 aaKnown RBP20.03■□□□□ 0.8
CHRNA7-212ENST00000636271 AAMPQ13685 434 aa20.03■□□□□ 0.8
CHRNA7-212ENST00000636271 AKAP4Q5JQC9 854 aa20.03■□□□□ 0.8
CHRNA7-212ENST00000636271 MEX3CQ5U5Q3 659 aaKnown RBP20.03■□□□□ 0.8
CHRNA7-212ENST00000636271 LGR6Q9HBX8 967 aa20.03■□□□□ 0.8
CHRNA7-212ENST00000636271 SPG7Q9UQ90 795 aa20.03■□□□□ 0.8
CHRNA7-212ENST00000636271 SPATA31A1Q5TZJ5 1347 aa20.02■□□□□ 0.8
CHRNA7-212ENST00000636271 CYP27B1O15528 508 aa20.02■□□□□ 0.8
CHRNA7-212ENST00000636271 EXOSC9Q06265 439 aaKnown RBP20.02■□□□□ 0.8
CHRNA7-212ENST00000636271 MPRIPQ6WCQ1 1025 aa20.02■□□□□ 0.8
CHRNA7-212ENST00000636271 LAS1LQ9Y4W2 734 aaKnown RBP20.02■□□□□ 0.8
CHRNA7-212ENST00000636271 ZNF853P0CG23 659 aa20.01■□□□□ 0.79
CHRNA7-212ENST00000636271 SPATA31A5Q5VU36 1347 aa20.01■□□□□ 0.79
CHRNA7-212ENST00000636271 SPATA31A7Q8IWB4 1347 aa20.01■□□□□ 0.79
CHRNA7-212ENST00000636271 NWD2Q9ULI1 1742 aa20.01■□□□□ 0.79
CHRNA7-212ENST00000636271 C1orf141Q5JVX7 400 aa20.01■□□□□ 0.79
CHRNA7-212ENST00000636271 PLEKHG2Q9H7P9 1386 aa20■□□□□ 0.79
CHRNA7-212ENST00000636271 PHKG2P15735 406 aa20■□□□□ 0.79
CHRNA7-212ENST00000636271 CALD1Q05682 793 aaKnown RBP20■□□□□ 0.79
CHRNA7-212ENST00000636271 ZCRB1Q8TBF4 217 aaKnown RBP20■□□□□ 0.79
CHRNA7-212ENST00000636271 IPO9Q96P70 1041 aaKnown RBP20■□□□□ 0.79
CHRNA7-212ENST00000636271 USP21Q9UK80 565 aa20■□□□□ 0.79
CHRNA7-212ENST00000636271 RLBP1P12271 317 aa19.99■□□□□ 0.79
CHRNA7-212ENST00000636271 FBXO41Q8TF61 875 aa19.99■□□□□ 0.79
CHRNA7-212ENST00000636271 CFAP44Q96MT7 982 aa19.99■□□□□ 0.79
CHRNA7-212ENST00000636271 IFT57Q9NWB7 429 aa19.99■□□□□ 0.79
CHRNA7-212ENST00000636271 CCDC9Q9Y3X0 531 aaKnown RBP19.99■□□□□ 0.79
CHRNA7-212ENST00000636271 DISP2A7MBM2 1401 aa19.99■□□□□ 0.79
CHRNA7-212ENST00000636271 MBIPQ9NS73 344 aa19.99■□□□□ 0.79
CHRNA7-212ENST00000636271 CEMIPQ8WUJ3 1361 aa19.98■□□□□ 0.79
CHRNA7-212ENST00000636271 IGHDP01880 384 aa19.98■□□□□ 0.79
CHRNA7-212ENST00000636271 GNAI1P63096 354 aa19.98■□□□□ 0.79
CHRNA7-212ENST00000636271 MIS18AQ9NYP9 233 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms