RNA–Protein interactions for RNA: ENST00000636120.1

PDE4D-228, Transcript of phosphodiesterase 4D, humanhuman

TSL 5 BASIC

Gene PDE4D, Length 6,659 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-228ENST00000636120 PPIP5K1Q6PFW1 1433 aa7.73□□□□□ -1.17
PDE4D-228ENST00000636120 STARD3NLO95772 234 aa7.73□□□□□ -1.17
PDE4D-228ENST00000636120 CCDC39Q9UFE4 941 aa7.73□□□□□ -1.17
PDE4D-228ENST00000636120 PIK3C2GO75747 1445 aa7.72□□□□□ -1.17
PDE4D-228ENST00000636120 DHX8Q14562 1220 aaKnown RBP7.72□□□□□ -1.17
PDE4D-228ENST00000636120 LARP1Q6PKG0 1096 aaKnown RBP7.72□□□□□ -1.17
PDE4D-228ENST00000636120 SRGAP3O43295 1099 aa7.72□□□□□ -1.17
PDE4D-228ENST00000636120 CTNNA3Q9UI47 895 aa7.72□□□□□ -1.17
PDE4D-228ENST00000636120 POLR3AO14802 1390 aaPredicted RBP7.72□□□□□ -1.17
PDE4D-228ENST00000636120 MYL6BP14649 208 aa7.72□□□□□ -1.17
PDE4D-228ENST00000636120 KIF1BPQ96EK5 621 aa7.72□□□□□ -1.17
PDE4D-228ENST00000636120 WDR33Q9C0J8 1336 aaKnown RBP7.72□□□□□ -1.17
PDE4D-228ENST00000636120 IPO7O95373 1038 aaKnown RBP7.72□□□□□ -1.17
PDE4D-228ENST00000636120 AACSQ86V21 672 aa7.72□□□□□ -1.17
PDE4D-228ENST00000636120 HYPKQ9NX55 129 aa7.72□□□□□ -1.17
PDE4D-228ENST00000636120 PLEKHH1Q9ULM0 1364 aa7.72□□□□□ -1.17
PDE4D-228ENST00000636120 DDX54Q8TDD1 881 aaKnown RBP7.71□□□□□ -1.17
PDE4D-228ENST00000636120 PLXNC1O60486 1568 aa7.71□□□□□ -1.17
PDE4D-228ENST00000636120 COL17A1Q9UMD9 1497 aaPredicted RBP7.71□□□□□ -1.17
PDE4D-228ENST00000636120 TRPM2O94759 1503 aa7.71□□□□□ -1.17
PDE4D-228ENST00000636120 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.71□□□□□ -1.17
PDE4D-228ENST00000636120 AKAP2Q9Y2D5 859 aa7.71□□□□□ -1.18
PDE4D-228ENST00000636120 A0A0U1RQG5 324 aaPredicted RBP7.71□□□□□ -1.18
PDE4D-228ENST00000636120 TRAK2O60296 914 aa7.71□□□□□ -1.18
PDE4D-228ENST00000636120 CDKL5O76039 1030 aa7.7□□□□□ -1.18
PDE4D-228ENST00000636120 HSP90AB3PQ58FF7 597 aa7.7□□□□□ -1.18
PDE4D-228ENST00000636120 MCM10Q7L590 875 aa7.7□□□□□ -1.18
PDE4D-228ENST00000636120 SSH1Q8WYL5 1049 aa7.7□□□□□ -1.18
PDE4D-228ENST00000636120 EMILIN1Q9Y6C2 1016 aa7.7□□□□□ -1.18
PDE4D-228ENST00000636120 JMYQ8N9B5 988 aa7.7□□□□□ -1.18
PDE4D-228ENST00000636120 TSPY26PQ9H489 355 aa7.7□□□□□ -1.18
PDE4D-228ENST00000636120 ZNF652Q9Y2D9 606 aa7.7□□□□□ -1.18
PDE4D-228ENST00000636120 DMRT2Q9Y5R5 561 aa7.7□□□□□ -1.18
PDE4D-228ENST00000636120 RAD21O60216 631 aa7.7□□□□□ -1.18
PDE4D-228ENST00000636120 ACEP12821 1306 aa7.7□□□□□ -1.18
PDE4D-228ENST00000636120 GPS2Q13227 327 aa7.7□□□□□ -1.18
PDE4D-228ENST00000636120 ARHGAP45Q92619 1136 aa7.7□□□□□ -1.18
PDE4D-228ENST00000636120 PCMTD1Q96MG8 357 aaPredicted RBP7.7□□□□□ -1.18
PDE4D-228ENST00000636120 MPHOSPH8Q99549 860 aa7.7□□□□□ -1.18
PDE4D-228ENST00000636120 TMOD3Q9NYL9 352 aa7.7□□□□□ -1.18
PDE4D-228ENST00000636120 PIK3R4Q99570 1358 aa7.7□□□□□ -1.18
PDE4D-228ENST00000636120 ATP10AO60312 1499 aa7.7□□□□□ -1.18
PDE4D-228ENST00000636120 NEO1Q92859 1461 aa7.7□□□□□ -1.18
PDE4D-228ENST00000636120 KDM5AP29375 1690 aaKnown RBP7.7□□□□□ -1.18
PDE4D-228ENST00000636120 ABCA8O94911 1581 aa7.7□□□□□ -1.18
PDE4D-228ENST00000636120 FYB1O15117 783 aa7.69□□□□□ -1.18
PDE4D-228ENST00000636120 GLRX3O76003 335 aaKnown RBP7.69□□□□□ -1.18
PDE4D-228ENST00000636120 NASPP49321 788 aaPredicted RBP7.69□□□□□ -1.18
PDE4D-228ENST00000636120 CEP126Q9P2H0 1117 aa7.69□□□□□ -1.18
PDE4D-228ENST00000636120 MX1P20591 662 aa7.69□□□□□ -1.18
PDE4D-228ENST00000636120 PIP4K2AP48426 406 aaPredicted RBP7.69□□□□□ -1.18
PDE4D-228ENST00000636120 TEX13AQ9BXU3 409 aaPredicted RBP7.69□□□□□ -1.18
PDE4D-228ENST00000636120 TXLNAP40222 546 aa7.69□□□□□ -1.18
PDE4D-228ENST00000636120 SIL1Q9H173 461 aa7.69□□□□□ -1.18
PDE4D-228ENST00000636120 PDRG1Q9NUG6 133 aa7.69□□□□□ -1.18
PDE4D-228ENST00000636120 DBF4Q9UBU7 674 aaPredicted RBP7.69□□□□□ -1.18
PDE4D-228ENST00000636120 CCDC69A6NI79 296 aa7.69□□□□□ -1.18
PDE4D-228ENST00000636120 CCP110O43303 1012 aa7.69□□□□□ -1.18
PDE4D-228ENST00000636120 KINO60870 393 aaKnown RBP7.69□□□□□ -1.18
PDE4D-228ENST00000636120 IGHMBP2P38935 993 aaKnown RBP7.69□□□□□ -1.18
PDE4D-228ENST00000636120 TRIM22Q8IYM9 498 aa7.68□□□□□ -1.18
PDE4D-228ENST00000636120 KRT28Q7Z3Y7 464 aa7.68□□□□□ -1.18
PDE4D-228ENST00000636120 SHROOM2Q13796 1616 aa7.68□□□□□ -1.18
PDE4D-228ENST00000636120 NPC1L1Q9UHC9 1359 aa7.68□□□□□ -1.18
PDE4D-228ENST00000636120 ZC3H6P61129 1189 aaKnown RBP7.68□□□□□ -1.18
PDE4D-228ENST00000636120 CCDC173Q0VFZ6 552 aa7.68□□□□□ -1.18
PDE4D-228ENST00000636120 BLOC1S2Q6QNY1 142 aa7.68□□□□□ -1.18
PDE4D-228ENST00000636120 CCDC43Q96MW1 224 aaKnown RBP7.68□□□□□ -1.18
PDE4D-228ENST00000636120 DNAAF4Q8WXU2 420 aa7.68□□□□□ -1.18
PDE4D-228ENST00000636120 WASF1Q92558 559 aa7.68□□□□□ -1.18
PDE4D-228ENST00000636120 DACH1Q9UI36 760 aa7.68□□□□□ -1.18
PDE4D-228ENST00000636120 INSRP06213 1382 aa7.68□□□□□ -1.18
PDE4D-228ENST00000636120 AMER1Q5JTC6 1135 aaPredicted RBP7.68□□□□□ -1.18
PDE4D-228ENST00000636120 FMNL2Q96PY5 1086 aa7.68□□□□□ -1.18
PDE4D-228ENST00000636120 FOSBP53539 338 aa7.67□□□□□ -1.18
PDE4D-228ENST00000636120 XPCQ01831 940 aaPredicted RBP7.67□□□□□ -1.18
PDE4D-228ENST00000636120 PREX2Q70Z35 1606 aa7.67□□□□□ -1.18
PDE4D-228ENST00000636120 MSH6P52701 1360 aa7.67□□□□□ -1.18
PDE4D-228ENST00000636120 SDF4Q9BRK5 362 aa7.67□□□□□ -1.18
PDE4D-228ENST00000636120 NPATQ14207 1427 aa7.67□□□□□ -1.18
PDE4D-228ENST00000636120 YTHDC2Q9H6S0 1430 aaKnown RBP7.67□□□□□ -1.18
PDE4D-228ENST00000636120 KRT85P78386 507 aa7.67□□□□□ -1.18
PDE4D-228ENST00000636120 CADPS2Q86UW7 1296 aa7.67□□□□□ -1.18
PDE4D-228ENST00000636120 IFNL2Q8IZJ0 200 aa7.67□□□□□ -1.18
PDE4D-228ENST00000636120 SOS1Q07889 1333 aaPredicted RBP7.67□□□□□ -1.18
PDE4D-228ENST00000636120 KDM5DQ9BY66 1539 aa7.67□□□□□ -1.18
PDE4D-228ENST00000636120 FAM177BA6PVY3 158 aa7.67□□□□□ -1.18
PDE4D-228ENST00000636120 PRPF40AO75400 957 aaKnown RBP7.67□□□□□ -1.18
PDE4D-228ENST00000636120 STK38Q15208 465 aa7.67□□□□□ -1.18
PDE4D-228ENST00000636120 IMMTQ16891 758 aaKnown RBP7.67□□□□□ -1.18
PDE4D-228ENST00000636120 ZFYVE16Q7Z3T8 1539 aa7.66□□□□□ -1.18
PDE4D-228ENST00000636120 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.66□□□□□ -1.18
PDE4D-228ENST00000636120 CAVIN1Q6NZI2 390 aaKnown RBP7.66□□□□□ -1.18
PDE4D-228ENST00000636120 NUTM2BA6NNL0 878 aaPredicted RBP7.66□□□□□ -1.18
PDE4D-228ENST00000636120 NUTM2EB1AL46 878 aaPredicted RBP7.66□□□□□ -1.18
PDE4D-228ENST00000636120 HMGB1P09429 215 aaKnown RBP7.66□□□□□ -1.18
PDE4D-228ENST00000636120 TRIM27P14373 513 aa7.66□□□□□ -1.18
PDE4D-228ENST00000636120 NUTM2AQ8IVF1 878 aaPredicted RBP7.66□□□□□ -1.18
PDE4D-228ENST00000636120 MBIPQ9NS73 344 aa7.66□□□□□ -1.18
PDE4D-228ENST00000636120 CFAP45Q9UL16 551 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms