RNA–Protein interactions for RNA: ENST00000635915.1

CLN5-206, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 5

Gene CLN5, Length 2,517 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-206ENST00000635915 NBPF4Q96M43 638 aa22.92■■□□□ 1.26
CLN5-206ENST00000635915 GAS2L2Q8NHY3 880 aa22.91■■□□□ 1.26
CLN5-206ENST00000635915 TRPM3Q9HCF6 1732 aaPredicted RBP22.91■■□□□ 1.26
CLN5-206ENST00000635915 LRRC59Q96AG4 307 aaKnown RBP22.9■■□□□ 1.26
CLN5-206ENST00000635915 BRPF1P55201 1214 aaPredicted RBP22.9■■□□□ 1.26
CLN5-206ENST00000635915 AAMPQ13685 434 aa22.89■■□□□ 1.26
CLN5-206ENST00000635915 ARHGEF25Q86VW2 580 aa22.89■■□□□ 1.25
CLN5-206ENST00000635915 BACH2Q9BYV9 841 aa22.89■■□□□ 1.25
CLN5-206ENST00000635915 DDX19BQ9UMR2 479 aa22.89■■□□□ 1.25
CLN5-206ENST00000635915 LMTK3Q96Q04 1460 aa22.88■■□□□ 1.25
CLN5-206ENST00000635915 KIF1AQ12756 1690 aa22.88■■□□□ 1.25
CLN5-206ENST00000635915 RGPD2P0DJD1 1756 aa22.87■■□□□ 1.25
CLN5-206ENST00000635915 MSH5O43196 834 aa22.87■■□□□ 1.25
CLN5-206ENST00000635915 USP19O94966 1318 aa22.87■■□□□ 1.25
CLN5-206ENST00000635915 SLIT3O75094 1523 aa22.86■■□□□ 1.25
CLN5-206ENST00000635915 GNAT3A8MTJ3 354 aa22.86■■□□□ 1.25
CLN5-206ENST00000635915 TSPYL4Q9UJ04 414 aa22.86■■□□□ 1.25
CLN5-206ENST00000635915 MSH6P52701 1360 aa22.85■■□□□ 1.25
CLN5-206ENST00000635915 AXIN2Q9Y2T1 843 aa22.85■■□□□ 1.25
CLN5-206ENST00000635915 ZC3H6P61129 1189 aaKnown RBP22.84■■□□□ 1.25
CLN5-206ENST00000635915 CADPS2Q86UW7 1296 aa22.84■■□□□ 1.25
CLN5-206ENST00000635915 STRCQ7RTU9 1775 aa22.84■■□□□ 1.25
CLN5-206ENST00000635915 IL17REQ8NFR9 667 aa22.84■■□□□ 1.25
CLN5-206ENST00000635915 ZBTB40Q9NUA8 1239 aa22.84■■□□□ 1.25
CLN5-206ENST00000635915 DCCP43146 1447 aa22.84■■□□□ 1.25
CLN5-206ENST00000635915 RWDD1Q9H446 243 aaPredicted RBP22.83■■□□□ 1.25
CLN5-206ENST00000635915 MAP3K5Q99683 1374 aa22.83■■□□□ 1.24
CLN5-206ENST00000635915 ARHGAP45Q92619 1136 aa22.82■■□□□ 1.24
CLN5-206ENST00000635915 PHRF1Q9P1Y6 1649 aaKnown RBP22.82■■□□□ 1.24
CLN5-206ENST00000635915 KIAA0232Q92628 1395 aa22.82■■□□□ 1.24
CLN5-206ENST00000635915 ANKRD24Q8TF21 1146 aa22.81■■□□□ 1.24
CLN5-206ENST00000635915 NCOA3Q9Y6Q9 1424 aa22.81■■□□□ 1.24
CLN5-206ENST00000635915 CABLES1Q8TDN4 633 aa22.81■■□□□ 1.24
CLN5-206ENST00000635915 ALS2Q96Q42 1657 aa22.81■■□□□ 1.24
CLN5-206ENST00000635915 ZNF335Q9H4Z2 1342 aaPredicted RBP22.81■■□□□ 1.24
CLN5-206ENST00000635915 NPM2Q86SE8 214 aaKnown RBP22.8■■□□□ 1.24
CLN5-206ENST00000635915 XIRP1Q702N8 1843 aaKnown RBP22.8■■□□□ 1.24
CLN5-206ENST00000635915 MED1Q15648 1581 aaPredicted RBP22.8■■□□□ 1.24
CLN5-206ENST00000635915 HTATSF1O43719 755 aaKnown RBP22.8■■□□□ 1.24
CLN5-206ENST00000635915 ABCC4O15439 1325 aa22.79■■□□□ 1.24
CLN5-206ENST00000635915 PDZRN3Q9UPQ7 1066 aa22.79■■□□□ 1.24
CLN5-206ENST00000635915 NPHP3Q7Z494 1330 aa22.77■■□□□ 1.24
CLN5-206ENST00000635915 C1orf115Q9H7X2 142 aa22.77■■□□□ 1.24
CLN5-206ENST00000635915 LRRC37A3O60309 1634 aa22.77■■□□□ 1.24
CLN5-206ENST00000635915 RGPD5Q99666 1765 aa22.77■■□□□ 1.24
CLN5-206ENST00000635915 ZBTB7BO15156 539 aaPredicted RBP22.77■■□□□ 1.24
CLN5-206ENST00000635915 C8orf34Q49A92 452 aa22.76■■□□□ 1.23
CLN5-206ENST00000635915 API5Q9BZZ5 524 aaKnown RBP22.76■■□□□ 1.23
CLN5-206ENST00000635915 LGR6Q9HBX8 967 aa22.75■■□□□ 1.23
CLN5-206ENST00000635915 SLC4A2P04920 1241 aa22.75■■□□□ 1.23
CLN5-206ENST00000635915 ANP32AP39687 249 aaKnown RBP22.74■■□□□ 1.23
CLN5-206ENST00000635915 HAP1P54257 671 aaPredicted RBP22.74■■□□□ 1.23
CLN5-206ENST00000635915 HDAC1Q13547 482 aaPredicted RBP22.74■■□□□ 1.23
CLN5-206ENST00000635915 FAM161AQ3B820 660 aa22.74■■□□□ 1.23
CLN5-206ENST00000635915 ZNF530Q6P9A1 599 aaPredicted RBP22.74■■□□□ 1.23
CLN5-206ENST00000635915 BRINP3Q76B58 766 aa22.74■■□□□ 1.23
CLN5-206ENST00000635915 TAF7Q15545 349 aaPredicted RBP22.73■■□□□ 1.23
CLN5-206ENST00000635915 NECTIN2Q92692 538 aa22.73■■□□□ 1.23
CLN5-206ENST00000635915 RGS12O14924 1447 aa22.73■■□□□ 1.23
CLN5-206ENST00000635915 ERBB3P21860 1342 aa22.72■■□□□ 1.23
CLN5-206ENST00000635915 PXDNQ92626 1479 aa22.72■■□□□ 1.23
CLN5-206ENST00000635915 G2E3Q7L622 706 aa22.72■■□□□ 1.23
CLN5-206ENST00000635915 TNS3Q68CZ2 1445 aa22.72■■□□□ 1.23
CLN5-206ENST00000635915 CHRNA2Q15822 529 aa22.71■■□□□ 1.23
CLN5-206ENST00000635915 MPRIPQ6WCQ1 1025 aa22.71■■□□□ 1.23
CLN5-206ENST00000635915 SPATA31A3Q5VYP0 1347 aa22.7■■□□□ 1.22
CLN5-206ENST00000635915 CEMIPQ8WUJ3 1361 aa22.7■■□□□ 1.22
CLN5-206ENST00000635915 PLEKHO1Q53GL0 409 aaPredicted RBP22.7■■□□□ 1.22
CLN5-206ENST00000635915 NCAPD2Q15021 1401 aa22.69■■□□□ 1.22
CLN5-206ENST00000635915 NLRP2Q9NX02 1062 aa22.68■■□□□ 1.22
CLN5-206ENST00000635915 SLAIN2Q9P270 581 aa22.68■■□□□ 1.22
CLN5-206ENST00000635915 AKAP4Q5JQC9 854 aa22.67■■□□□ 1.22
CLN5-206ENST00000635915 SMC5Q8IY18 1101 aa22.67■■□□□ 1.22
CLN5-206ENST00000635915 F6X3S4 739 aa22.66■■□□□ 1.22
CLN5-206ENST00000635915 INTS3Q68E01 1043 aaKnown RBP22.66■■□□□ 1.22
CLN5-206ENST00000635915 PTPRCP08575 1304 aa22.66■■□□□ 1.22
CLN5-206ENST00000635915 SIRT2Q8IXJ6 389 aa22.66■■□□□ 1.22
CLN5-206ENST00000635915 KCNQ3O43525 872 aa22.65■■□□□ 1.22
CLN5-206ENST00000635915 AMOTQ4VCS5 1084 aa22.65■■□□□ 1.22
CLN5-206ENST00000635915 IPO9Q96P70 1041 aaKnown RBP22.65■■□□□ 1.22
CLN5-206ENST00000635915 CAMTA1Q9Y6Y1 1673 aa22.64■■□□□ 1.22
CLN5-206ENST00000635915 C1orf141Q5JVX7 400 aa22.64■■□□□ 1.22
CLN5-206ENST00000635915 STK31Q9BXU1 1019 aa22.64■■□□□ 1.22
CLN5-206ENST00000635915 TEFQ10587 303 aa22.64■■□□□ 1.21
CLN5-206ENST00000635915 CHMP4BQ9H444 224 aaKnown RBP22.64■■□□□ 1.21
CLN5-206ENST00000635915 LMO7Q8WWI1 1683 aa22.64■■□□□ 1.21
CLN5-206ENST00000635915 SLC4A10Q6U841 1118 aa22.63■■□□□ 1.21
CLN5-206ENST00000635915 CSB-PGBD3P0DP91 1061 aa22.63■■□□□ 1.21
CLN5-206ENST00000635915 BABAM1Q9NWV8 329 aa22.63■■□□□ 1.21
CLN5-206ENST00000635915 COL18A1P39060 1754 aa22.62■■□□□ 1.21
CLN5-206ENST00000635915 CCDC30Q5VVM6 783 aa22.62■■□□□ 1.21
CLN5-206ENST00000635915 ANP32EQ9BTT0 268 aa22.62■■□□□ 1.21
CLN5-206ENST00000635915 RNMTO43148 476 aaKnown RBP22.62■■□□□ 1.21
CLN5-206ENST00000635915 EIF4A1P60842 406 aaKnown RBP22.6■■□□□ 1.21
CLN5-206ENST00000635915 FLIIQ13045 1269 aa22.6■■□□□ 1.21
CLN5-206ENST00000635915 MEIS3Q99687 375 aa22.6■■□□□ 1.21
CLN5-206ENST00000635915 LNPKQ9C0E8 428 aa22.6■■□□□ 1.21
CLN5-206ENST00000635915 FAM208AQ9UK61 1670 aaKnown RBP22.6■■□□□ 1.21
CLN5-206ENST00000635915 CRYBG1Q9Y4K1 1723 aa22.6■■□□□ 1.21
CLN5-206ENST00000635915 BTBD11A6QL63 1104 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms