RNA–Protein interactions for RNA: ENST00000635886.1

C11orf53-202, Transcript of chromosome 11 open reading frame 53, humanhuman

TSL 5

Gene C11orf53, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf53-202ENST00000635886 KCNQ2O43526 872 aa18.32■□□□□ 0.52
C11orf53-202ENST00000635886 TATP17735 454 aaPredicted RBP18.32■□□□□ 0.52
C11orf53-202ENST00000635886 EYA1Q99502 592 aa18.32■□□□□ 0.52
C11orf53-202ENST00000635886 SHANK3Q9BYB0 1731 aa18.31■□□□□ 0.52
C11orf53-202ENST00000635886 NHSQ6T4R5 1651 aa18.29■□□□□ 0.52
C11orf53-202ENST00000635886 PLSCR1O15162 318 aa18.29■□□□□ 0.52
C11orf53-202ENST00000635886 NPC1L1Q9UHC9 1359 aa18.29■□□□□ 0.52
C11orf53-202ENST00000635886 RREB1Q92766 1687 aa18.28■□□□□ 0.52
C11orf53-202ENST00000635886 CNGB1Q14028 1251 aaPredicted RBP18.28■□□□□ 0.52
C11orf53-202ENST00000635886 PSDA5PKW4 1024 aaPredicted RBP18.27■□□□□ 0.52
C11orf53-202ENST00000635886 IGSF1Q8N6C5 1336 aa18.26■□□□□ 0.51
C11orf53-202ENST00000635886 RGPD3A6NKT7 1758 aaPredicted RBP18.26■□□□□ 0.51
C11orf53-202ENST00000635886 RGPD4Q7Z3J3 1758 aa18.26■□□□□ 0.51
C11orf53-202ENST00000635886 NUP188Q5SRE5 1749 aa18.26■□□□□ 0.51
C11orf53-202ENST00000635886 PCDH11XQ9BZA7 1347 aa18.25■□□□□ 0.51
C11orf53-202ENST00000635886 PCDH11YQ9BZA8 1340 aa18.25■□□□□ 0.51
C11orf53-202ENST00000635886 MTHFSP49914 203 aa18.25■□□□□ 0.51
C11orf53-202ENST00000635886 PROM2Q8N271 834 aa18.25■□□□□ 0.51
C11orf53-202ENST00000635886 CYP27B1O15528 508 aa18.24■□□□□ 0.51
C11orf53-202ENST00000635886 R3HDM1Q15032 1099 aaKnown RBP18.24■□□□□ 0.51
C11orf53-202ENST00000635886 PKD1L3Q7Z443 1732 aa18.23■□□□□ 0.51
C11orf53-202ENST00000635886 PRIM1P49642 420 aaKnown RBP18.23■□□□□ 0.51
C11orf53-202ENST00000635886 SYTL4Q96C24 671 aaPredicted RBP18.23■□□□□ 0.51
C11orf53-202ENST00000635886 BTAF1O14981 1849 aa18.23■□□□□ 0.51
C11orf53-202ENST00000635886 DOT1LQ8TEK3 1739 aa18.23■□□□□ 0.51
C11orf53-202ENST00000635886 KAT6BQ8WYB5 2073 aa18.22■□□□□ 0.51
C11orf53-202ENST00000635886 IL13P35225 146 aa18.22■□□□□ 0.51
C11orf53-202ENST00000635886 TXNRD1Q16881 649 aa18.22■□□□□ 0.51
C11orf53-202ENST00000635886 SPG7Q9UQ90 795 aa18.22■□□□□ 0.51
C11orf53-202ENST00000635886 NBPF14Q5TI25 921 aa18.21■□□□□ 0.51
C11orf53-202ENST00000635886 AEBP1Q8IUX7 1158 aa18.21■□□□□ 0.51
C11orf53-202ENST00000635886 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.21■□□□□ 0.51
C11orf53-202ENST00000635886 SULT6B1Q6IMI4 303 aa18.18■□□□□ 0.5
C11orf53-202ENST00000635886 ANO8Q9HCE9 1232 aaPredicted RBP18.18■□□□□ 0.5
C11orf53-202ENST00000635886 PLEKHG2Q9H7P9 1386 aa18.17■□□□□ 0.5
C11orf53-202ENST00000635886 NKX1-1Q15270 411 aaPredicted RBP18.17■□□□□ 0.5
C11orf53-202ENST00000635886 KDRP35968 1356 aa18.17■□□□□ 0.5
C11orf53-202ENST00000635886 DIAPH1O60610 1272 aaKnown RBP18.16■□□□□ 0.5
C11orf53-202ENST00000635886 PHKG2P15735 406 aa18.16■□□□□ 0.5
C11orf53-202ENST00000635886 IFNL2Q8IZJ0 200 aa18.16■□□□□ 0.5
C11orf53-202ENST00000635886 TOGARAM1Q9Y4F4 1720 aa18.15■□□□□ 0.5
C11orf53-202ENST00000635886 COL3A1P02461 1466 aaPredicted RBP18.15■□□□□ 0.5
C11orf53-202ENST00000635886 PLEKHO1Q53GL0 409 aaPredicted RBP18.15■□□□□ 0.5
C11orf53-202ENST00000635886 ZEB1P37275 1124 aaPredicted RBP18.14■□□□□ 0.49
C11orf53-202ENST00000635886 MPRIPQ6WCQ1 1025 aa18.14■□□□□ 0.49
C11orf53-202ENST00000635886 LRRC4BQ9NT99 713 aa18.14■□□□□ 0.49
C11orf53-202ENST00000635886 PPP2R1AP30153 589 aa18.13■□□□□ 0.49
C11orf53-202ENST00000635886 AMOTQ4VCS5 1084 aa18.13■□□□□ 0.49
C11orf53-202ENST00000635886 HMOX1P09601 288 aa18.12■□□□□ 0.49
C11orf53-202ENST00000635886 ZNF530Q6P9A1 599 aaPredicted RBP18.12■□□□□ 0.49
C11orf53-202ENST00000635886 STK32BQ9NY57 414 aa18.12■□□□□ 0.49
C11orf53-202ENST00000635886 KCNQ4P56696 695 aa18.11■□□□□ 0.49
C11orf53-202ENST00000635886 SLC15A2Q16348 729 aa18.11■□□□□ 0.49
C11orf53-202ENST00000635886 SLC27A3Q5K4L6 730 aa18.11■□□□□ 0.49
C11orf53-202ENST00000635886 PAPPAQ13219 1627 aa18.11■□□□□ 0.49
C11orf53-202ENST00000635886 ITGB4P16144 1822 aa18.1■□□□□ 0.49
C11orf53-202ENST00000635886 DDX10Q13206 875 aaKnown RBP18.1■□□□□ 0.49
C11orf53-202ENST00000635886 PIGBQ92521 554 aa18.1■□□□□ 0.49
C11orf53-202ENST00000635886 LY75O60449 1722 aa18.09■□□□□ 0.49
C11orf53-202ENST00000635886 LRP5O75197 1615 aa18.09■□□□□ 0.49
C11orf53-202ENST00000635886 U2SURPO15042 1029 aaKnown RBP18.09■□□□□ 0.49
C11orf53-202ENST00000635886 CFAP53Q96M91 514 aa18.09■□□□□ 0.49
C11orf53-202ENST00000635886 PALLDQ8WX93 1383 aa18.08■□□□□ 0.49
C11orf53-202ENST00000635886 HSP90AB1P08238 724 aaKnown RBP18.08■□□□□ 0.48
C11orf53-202ENST00000635886 ZNF827Q17R98 1081 aa18.08■□□□□ 0.48
C11orf53-202ENST00000635886 DCAF5Q96JK2 942 aa18.08■□□□□ 0.48
C11orf53-202ENST00000635886 PDGFDQ9GZP0 370 aaPredicted RBP18.08■□□□□ 0.48
C11orf53-202ENST00000635886 TMOD3Q9NYL9 352 aa18.08■□□□□ 0.48
C11orf53-202ENST00000635886 CCNL1Q9UK58 526 aaPredicted RBP18.08■□□□□ 0.48
C11orf53-202ENST00000635886 KDM6AO15550 1401 aaPredicted RBP18.07■□□□□ 0.48
C11orf53-202ENST00000635886 C1orf141Q5JVX7 400 aa18.07■□□□□ 0.48
C11orf53-202ENST00000635886 SMARCC1Q92922 1105 aaPredicted RBP18.06■□□□□ 0.48
C11orf53-202ENST00000635886 AKT1S1Q96B36 256 aa18.06■□□□□ 0.48
C11orf53-202ENST00000635886 CASZ1Q86V15 1759 aa18.05■□□□□ 0.48
C11orf53-202ENST00000635886 ERVV-2B6SEH9 535 aa18.05■□□□□ 0.48
C11orf53-202ENST00000635886 ASAP1Q9ULH1 1129 aa18.04■□□□□ 0.48
C11orf53-202ENST00000635886 MTHFSDQ2M296 383 aaKnown RBP18.03■□□□□ 0.48
C11orf53-202ENST00000635886 AKAP4Q5JQC9 854 aa18.03■□□□□ 0.48
C11orf53-202ENST00000635886 SRCAPQ6ZRS2 3230 aa18.03■□□□□ 0.48
C11orf53-202ENST00000635886 CABP4P57796 275 aa18.02■□□□□ 0.48
C11orf53-202ENST00000635886 ATG3Q9NT62 314 aa18.02■□□□□ 0.48
C11orf53-202ENST00000635886 NUDCQ9Y266 331 aa18.02■□□□□ 0.48
C11orf53-202ENST00000635886 ZBTB7AO95365 584 aa18.01■□□□□ 0.47
C11orf53-202ENST00000635886 SPON1Q9HCB6 807 aa18.01■□□□□ 0.47
C11orf53-202ENST00000635886 LOC102724428A0A0B4J2F2 783 aa18■□□□□ 0.47
C11orf53-202ENST00000635886 U2AF1L5P0DN76 240 aaPredicted RBP18■□□□□ 0.47
C11orf53-202ENST00000635886 SIK1P57059 783 aa18■□□□□ 0.47
C11orf53-202ENST00000635886 U2AF1Q01081 240 aaKnown RBP eCLIP18■□□□□ 0.47
C11orf53-202ENST00000635886 RSPH6AQ9H0K4 717 aa18■□□□□ 0.47
C11orf53-202ENST00000635886 TFCP2L1Q9NZI6 479 aa18■□□□□ 0.47
C11orf53-202ENST00000635886 PRKAR2BP31323 418 aa17.99■□□□□ 0.47
C11orf53-202ENST00000635886 RALBP1Q15311 655 aa17.99■□□□□ 0.47
C11orf53-202ENST00000635886 NFATC2IPQ8NCF5 419 aa17.99■□□□□ 0.47
C11orf53-202ENST00000635886 LGR6Q9HBX8 967 aa17.99■□□□□ 0.47
C11orf53-202ENST00000635886 C5P01031 1676 aa17.99■□□□□ 0.47
C11orf53-202ENST00000635886 PNPLA7Q6ZV29 1317 aa17.98■□□□□ 0.47
C11orf53-202ENST00000635886 ATF5Q9Y2D1 282 aaPredicted RBP17.98■□□□□ 0.47
C11orf53-202ENST00000635886 SCN11AQ9UI33 1791 aa17.98■□□□□ 0.47
C11orf53-202ENST00000635886 RNMTO43148 476 aaKnown RBP17.97■□□□□ 0.47
C11orf53-202ENST00000635886 GAS2L2Q8NHY3 880 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms