RNA–Protein interactions for RNA: ENST00000635857.1

LIN28B-202, Transcript of lin-28 homolog B, humanhuman

TSL 5

Gene LIN28B, Length 912 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28B-202ENST00000635857 PCDH11XQ9BZA7 1347 aa23.01■■□□□ 1.27
LIN28B-202ENST00000635857 PCDH11YQ9BZA8 1340 aa23.01■■□□□ 1.27
LIN28B-202ENST00000635857 PARD3Q8TEW0 1356 aa23.01■■□□□ 1.27
LIN28B-202ENST00000635857 NCAPD2Q15021 1401 aa23■■□□□ 1.27
LIN28B-202ENST00000635857 NHSQ6T4R5 1651 aa23■■□□□ 1.27
LIN28B-202ENST00000635857 SHANK3Q9BYB0 1731 aa22.99■■□□□ 1.27
LIN28B-202ENST00000635857 SPG7Q9UQ90 795 aa22.99■■□□□ 1.27
LIN28B-202ENST00000635857 KAT6BQ8WYB5 2073 aa22.99■■□□□ 1.27
LIN28B-202ENST00000635857 IGSF1Q8N6C5 1336 aa22.98■■□□□ 1.27
LIN28B-202ENST00000635857 PKD1L3Q7Z443 1732 aa22.97■■□□□ 1.27
LIN28B-202ENST00000635857 ACSBG1Q96GR2 724 aa22.97■■□□□ 1.27
LIN28B-202ENST00000635857 RGPD3A6NKT7 1758 aaPredicted RBP22.96■■□□□ 1.27
LIN28B-202ENST00000635857 RGPD4Q7Z3J3 1758 aa22.96■■□□□ 1.27
LIN28B-202ENST00000635857 CFAP53Q96M91 514 aa22.96■■□□□ 1.27
LIN28B-202ENST00000635857 EZH2Q15910 746 aaKnown RBP22.95■■□□□ 1.26
LIN28B-202ENST00000635857 DOT1LQ8TEK3 1739 aa22.95■■□□□ 1.26
LIN28B-202ENST00000635857 PLEKHG2Q9H7P9 1386 aa22.95■■□□□ 1.26
LIN28B-202ENST00000635857 DIAPH1O60610 1272 aaKnown RBP22.94■■□□□ 1.26
LIN28B-202ENST00000635857 SYTL4Q96C24 671 aaPredicted RBP22.94■■□□□ 1.26
LIN28B-202ENST00000635857 DDX10Q13206 875 aaKnown RBP22.93■■□□□ 1.26
LIN28B-202ENST00000635857 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.93■■□□□ 1.265e-8■■□□□ 11.6
LIN28B-202ENST00000635857 PLSCR1O15162 318 aa22.92■■□□□ 1.26
LIN28B-202ENST00000635857 IL13P35225 146 aa22.92■■□□□ 1.26
LIN28B-202ENST00000635857 CAMKK2Q96RR4 588 aa22.92■■□□□ 1.26
LIN28B-202ENST00000635857 RREB1Q92766 1687 aa22.92■■□□□ 1.26
LIN28B-202ENST00000635857 SULT6B1Q6IMI4 303 aa22.91■■□□□ 1.26
LIN28B-202ENST00000635857 BTAF1O14981 1849 aa22.91■■□□□ 1.26
LIN28B-202ENST00000635857 KCNQ2O43526 872 aa22.9■■□□□ 1.26
LIN28B-202ENST00000635857 PLEKHO1Q53GL0 409 aaPredicted RBP22.89■■□□□ 1.25
LIN28B-202ENST00000635857 PPP2R1AP30153 589 aa22.88■■□□□ 1.25
LIN28B-202ENST00000635857 AMOTQ4VCS5 1084 aa22.88■■□□□ 1.25
LIN28B-202ENST00000635857 NBPF14Q5TI25 921 aa22.88■■□□□ 1.25
LIN28B-202ENST00000635857 IFNL2Q8IZJ0 200 aa22.88■■□□□ 1.25
LIN28B-202ENST00000635857 NUP188Q5SRE5 1749 aa22.88■■□□□ 1.25
LIN28B-202ENST00000635857 U2SURPO15042 1029 aaKnown RBP22.87■■□□□ 1.25
LIN28B-202ENST00000635857 CYP27B1O15528 508 aa22.87■■□□□ 1.25
LIN28B-202ENST00000635857 PTF1AQ7RTS3 328 aa22.87■■□□□ 1.25
LIN28B-202ENST00000635857 PRIM1P49642 420 aaKnown RBP22.86■■□□□ 1.25
LIN28B-202ENST00000635857 AEBP1Q8IUX7 1158 aa22.86■■□□□ 1.25
LIN28B-202ENST00000635857 NUDCQ9Y266 331 aa22.86■■□□□ 1.25
LIN28B-202ENST00000635857 KDRP35968 1356 aa22.86■■□□□ 1.25
LIN28B-202ENST00000635857 COL3A1P02461 1466 aaPredicted RBP22.85■■□□□ 1.25
LIN28B-202ENST00000635857 HSP90AB1P08238 724 aaKnown RBP22.84■■□□□ 1.25
LIN28B-202ENST00000635857 C1orf141Q5JVX7 400 aa22.84■■□□□ 1.25
LIN28B-202ENST00000635857 HMOX1P09601 288 aa22.83■■□□□ 1.25
LIN28B-202ENST00000635857 PHKG2P15735 406 aa22.83■■□□□ 1.25
LIN28B-202ENST00000635857 ZNF530Q6P9A1 599 aaPredicted RBP22.83■■□□□ 1.25
LIN28B-202ENST00000635857 RALBP1Q15311 655 aa22.82■■□□□ 1.24
LIN28B-202ENST00000635857 NKX1-1Q15270 411 aaPredicted RBP22.81■■□□□ 1.24
LIN28B-202ENST00000635857 TXNRD1Q16881 649 aa22.81■■□□□ 1.24
LIN28B-202ENST00000635857 TOGARAM1Q9Y4F4 1720 aa22.8■■□□□ 1.24
LIN28B-202ENST00000635857 ITGB4P16144 1822 aa22.8■■□□□ 1.24
LIN28B-202ENST00000635857 PSDA5PKW4 1024 aaPredicted RBP22.79■■□□□ 1.24
LIN28B-202ENST00000635857 MPRIPQ6WCQ1 1025 aa22.79■■□□□ 1.24
LIN28B-202ENST00000635857 ZNF316A6NFI3 1004 aaPredicted RBP22.78■■□□□ 1.24
LIN28B-202ENST00000635857 R3HDM1Q15032 1099 aaKnown RBP22.78■■□□□ 1.24
LIN28B-202ENST00000635857 TMOD3Q9NYL9 352 aa22.78■■□□□ 1.24
LIN28B-202ENST00000635857 DCAF5Q96JK2 942 aa22.77■■□□□ 1.24
LIN28B-202ENST00000635857 U2AF1L5P0DN76 240 aaPredicted RBP22.76■■□□□ 1.23
LIN28B-202ENST00000635857 U2AF1Q01081 240 aaKnown RBP eCLIP22.76■■□□□ 1.232e-6■■■■□ 20.6
LIN28B-202ENST00000635857 SLC27A3Q5K4L6 730 aa22.76■■□□□ 1.23
LIN28B-202ENST00000635857 STK32BQ9NY57 414 aa22.76■■□□□ 1.23
LIN28B-202ENST00000635857 HMGB2P26583 209 aaKnown RBP22.75■■□□□ 1.23
LIN28B-202ENST00000635857 SMARCC1Q92922 1105 aaPredicted RBP22.75■■□□□ 1.23
LIN28B-202ENST00000635857 LY75O60449 1722 aa22.74■■□□□ 1.23
LIN28B-202ENST00000635857 AKAP4Q5JQC9 854 aa22.74■■□□□ 1.23
LIN28B-202ENST00000635857 NEFMP07197 916 aa22.73■■□□□ 1.23
LIN28B-202ENST00000635857 PROM2Q8N271 834 aa22.73■■□□□ 1.23
LIN28B-202ENST00000635857 MYBBP1AQ9BQG0 1328 aaKnown RBP22.73■■□□□ 1.23
LIN28B-202ENST00000635857 ERVV-2B6SEH9 535 aa22.72■■□□□ 1.23
LIN28B-202ENST00000635857 CCNL1Q9UK58 526 aaPredicted RBP22.72■■□□□ 1.23
LIN28B-202ENST00000635857 PALLDQ8WX93 1383 aa22.72■■□□□ 1.23
LIN28B-202ENST00000635857 GAS2L2Q8NHY3 880 aa22.71■■□□□ 1.23
LIN28B-202ENST00000635857 CABP4P57796 275 aa22.7■■□□□ 1.22
LIN28B-202ENST00000635857 PIGBQ92521 554 aa22.7■■□□□ 1.22
LIN28B-202ENST00000635857 SCN11AQ9UI33 1791 aa22.69■■□□□ 1.22
LIN28B-202ENST00000635857 KDM6AO15550 1401 aaPredicted RBP22.69■■□□□ 1.22
LIN28B-202ENST00000635857 PRKAR2BP31323 418 aa22.69■■□□□ 1.22
LIN28B-202ENST00000635857 MTHFSDQ2M296 383 aaKnown RBP22.69■■□□□ 1.22
LIN28B-202ENST00000635857 FCHSD2O94868 740 aa22.68■■□□□ 1.22
LIN28B-202ENST00000635857 ANO8Q9HCE9 1232 aaPredicted RBP22.68■■□□□ 1.22
LIN28B-202ENST00000635857 PAPPAQ13219 1627 aa22.68■■□□□ 1.22
LIN28B-202ENST00000635857 VIRMAQ69YN4 1812 aaKnown RBP22.67■■□□□ 1.22
LIN28B-202ENST00000635857 SLC15A2Q16348 729 aa22.67■■□□□ 1.22
LIN28B-202ENST00000635857 RSPH6AQ9H0K4 717 aa22.67■■□□□ 1.22
LIN28B-202ENST00000635857 PNNQ9H307 717 aaKnown RBP22.66■■□□□ 1.22
LIN28B-202ENST00000635857 LRRC4BQ9NT99 713 aa22.66■■□□□ 1.22
LIN28B-202ENST00000635857 PRKRIP1Q9H875 184 aaPredicted RBP22.65■■□□□ 1.22
LIN28B-202ENST00000635857 C5P01031 1676 aa22.65■■□□□ 1.22
LIN28B-202ENST00000635857 MAP3K5Q99683 1374 aa22.64■■□□□ 1.22
LIN28B-202ENST00000635857 GNAT3A8MTJ3 354 aa22.63■■□□□ 1.21
LIN28B-202ENST00000635857 LRP5O75197 1615 aa22.62■■□□□ 1.21
LIN28B-202ENST00000635857 KCNQ4P56696 695 aa22.62■■□□□ 1.21
LIN28B-202ENST00000635857 ASAP1Q9ULH1 1129 aa22.62■■□□□ 1.21
LIN28B-202ENST00000635857 MAPK8IP3Q9UPT6 1336 aa22.61■■□□□ 1.21
LIN28B-202ENST00000635857 RNMTO43148 476 aaKnown RBP22.61■■□□□ 1.21
LIN28B-202ENST00000635857 NFATC2IPQ8NCF5 419 aa22.61■■□□□ 1.21
LIN28B-202ENST00000635857 TFCP2L1Q9NZI6 479 aa22.61■■□□□ 1.21
LIN28B-202ENST00000635857 TAF1LQ8IZX4 1826 aa22.6■■□□□ 1.21
LIN28B-202ENST00000635857 LOC102724428A0A0B4J2F2 783 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms