RNA–Protein interactions for RNA: ENST00000635751.1

CLN8-208, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-208ENST00000635751 USP35Q9P2H5 1018 aa25.97■■□□□ 1.75
CLN8-208ENST00000635751 FNBP4Q8N3X1 1017 aaPredicted RBP25.96■■□□□ 1.75
CLN8-208ENST00000635751 NFE2L2Q16236 605 aa25.95■■□□□ 1.75
CLN8-208ENST00000635751 RIPK4P57078 832 aa25.95■■□□□ 1.74
CLN8-208ENST00000635751 MTHFSDQ2M296 383 aaKnown RBP25.95■■□□□ 1.74
CLN8-208ENST00000635751 UNC5CLQ8IV45 518 aa25.95■■□□□ 1.74
CLN8-208ENST00000635751 RAPGEF4Q8WZA2 1011 aa25.95■■□□□ 1.74
CLN8-208ENST00000635751 BCL9LQ86UU0 1499 aa25.94■■□□□ 1.74
CLN8-208ENST00000635751 MEGF6O75095 1541 aa25.92■■□□□ 1.74
CLN8-208ENST00000635751 TATP17735 454 aaPredicted RBP25.92■■□□□ 1.74
CLN8-208ENST00000635751 MYT1Q01538 1121 aa25.92■■□□□ 1.74
CLN8-208ENST00000635751 NGEFQ8N5V2 710 aa25.92■■□□□ 1.74
CLN8-208ENST00000635751 USP21Q9UK80 565 aa25.92■■□□□ 1.74
CLN8-208ENST00000635751 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.92■■□□□ 1.74
CLN8-208ENST00000635751 PARP4Q9UKK3 1724 aaKnown RBP25.91■■□□□ 1.74
CLN8-208ENST00000635751 AFF2P51816 1311 aa25.9■■□□□ 1.74
CLN8-208ENST00000635751 PLEKHO1Q53GL0 409 aaPredicted RBP25.9■■□□□ 1.74
CLN8-208ENST00000635751 CCDC9Q9Y3X0 531 aaKnown RBP25.9■■□□□ 1.74
CLN8-208ENST00000635751 WWC1Q8IX03 1113 aa25.89■■□□□ 1.74
CLN8-208ENST00000635751 GAS2L2Q8NHY3 880 aa25.89■■□□□ 1.74
CLN8-208ENST00000635751 TRIM35Q9UPQ4 493 aa25.89■■□□□ 1.74
CLN8-208ENST00000635751 NCBP3Q53F19 620 aaKnown RBP25.88■■□□□ 1.73
CLN8-208ENST00000635751 WNK3Q9BYP7 1800 aa25.88■■□□□ 1.73
CLN8-208ENST00000635751 SPATA31A1Q5TZJ5 1347 aa25.88■■□□□ 1.73
CLN8-208ENST00000635751 IL2RBP14784 551 aa25.88■■□□□ 1.73
CLN8-208ENST00000635751 CCDC27Q2M243 656 aa25.88■■□□□ 1.73
CLN8-208ENST00000635751 AMOTQ4VCS5 1084 aa25.88■■□□□ 1.73
CLN8-208ENST00000635751 PHF23Q9BUL5 403 aaPredicted RBP25.88■■□□□ 1.73
CLN8-208ENST00000635751 SPATA31A5Q5VU36 1347 aa25.88■■□□□ 1.73
CLN8-208ENST00000635751 SPATA31A7Q8IWB4 1347 aa25.88■■□□□ 1.73
CLN8-208ENST00000635751 ZNF521Q96K83 1311 aa25.87■■□□□ 1.73
CLN8-208ENST00000635751 PKD1L3Q7Z443 1732 aa25.87■■□□□ 1.73
CLN8-208ENST00000635751 VIRMAQ69YN4 1812 aaKnown RBP25.86■■□□□ 1.73
CLN8-208ENST00000635751 VPS72Q15906 364 aa25.86■■□□□ 1.73
CLN8-208ENST00000635751 FANCIQ9NVI1 1328 aa25.86■■□□□ 1.73
CLN8-208ENST00000635751 OVOS2A0A0G2JMS6 1433 aa25.85■■□□□ 1.73
CLN8-208ENST00000635751 ZNF530Q6P9A1 599 aaPredicted RBP25.84■■□□□ 1.73
CLN8-208ENST00000635751 EXOC6Q8TAG9 804 aa25.84■■□□□ 1.73
CLN8-208ENST00000635751 SPG7Q9UQ90 795 aa25.84■■□□□ 1.73
CLN8-208ENST00000635751 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.83■■□□□ 1.73
CLN8-208ENST00000635751 THRAP3Q9Y2W1 955 aaKnown RBP25.83■■□□□ 1.73
CLN8-208ENST00000635751 DCTN1Q14203 1278 aa25.82■■□□□ 1.72
CLN8-208ENST00000635751 PLEKHG2Q9H7P9 1386 aa25.82■■□□□ 1.72
CLN8-208ENST00000635751 GNAT3A8MTJ3 354 aa25.81■■□□□ 1.72
CLN8-208ENST00000635751 GOLGA2Q08379 1002 aa25.81■■□□□ 1.72
CLN8-208ENST00000635751 LMOD3Q0VAK6 560 aa25.81■■□□□ 1.72
CLN8-208ENST00000635751 DISP2A7MBM2 1401 aa25.81■■□□□ 1.72
CLN8-208ENST00000635751 SHANK3Q9BYB0 1731 aa25.81■■□□□ 1.72
CLN8-208ENST00000635751 ZCRB1Q8TBF4 217 aaKnown RBP25.81■■□□□ 1.72
CLN8-208ENST00000635751 THUMPD2Q9BTF0 503 aaKnown RBP25.81■■□□□ 1.72
CLN8-208ENST00000635751 MAP3K5Q99683 1374 aa25.8■■□□□ 1.72
CLN8-208ENST00000635751 MCM10Q7L590 875 aa25.8■■□□□ 1.72
CLN8-208ENST00000635751 RTF1Q92541 710 aaKnown RBP25.8■■□□□ 1.72
CLN8-208ENST00000635751 AKAP4Q5JQC9 854 aa25.79■■□□□ 1.72
CLN8-208ENST00000635751 C1orf141Q5JVX7 400 aa25.79■■□□□ 1.72
CLN8-208ENST00000635751 WDR63Q8IWG1 891 aa25.79■■□□□ 1.72
CLN8-208ENST00000635751 DUSP27Q5VZP5 1158 aa25.79■■□□□ 1.72
CLN8-208ENST00000635751 HTATSF1O43719 755 aaKnown RBP25.77■■□□□ 1.72
CLN8-208ENST00000635751 BARGINQ6ZT62 677 aa25.77■■□□□ 1.72
CLN8-208ENST00000635751 SPINK5Q9NQ38 1064 aaPredicted RBP25.77■■□□□ 1.72
CLN8-208ENST00000635751 TRPC5Q9UL62 973 aaPredicted RBP25.77■■□□□ 1.72
CLN8-208ENST00000635751 ATRNO75882 1429 aa25.77■■□□□ 1.72
CLN8-208ENST00000635751 CYP27B1O15528 508 aa25.77■■□□□ 1.72
CLN8-208ENST00000635751 PHKG2P15735 406 aa25.76■■□□□ 1.71
CLN8-208ENST00000635751 FAM98CQ17RN3 349 aaKnown RBP25.76■■□□□ 1.71
CLN8-208ENST00000635751 IFNL2Q8IZJ0 200 aa25.76■■□□□ 1.71
CLN8-208ENST00000635751 CDCA7Q9BWT1 371 aaPredicted RBP25.76■■□□□ 1.71
CLN8-208ENST00000635751 QTRT2Q9H974 415 aaKnown RBP25.76■■□□□ 1.71
CLN8-208ENST00000635751 MPRIPQ6WCQ1 1025 aa25.75■■□□□ 1.71
CLN8-208ENST00000635751 IL17REQ8NFR9 667 aa25.75■■□□□ 1.71
CLN8-208ENST00000635751 GJD4Q96KN9 370 aaPredicted RBP25.75■■□□□ 1.71
CLN8-208ENST00000635751 GLI3P10071 1580 aa25.75■■□□□ 1.71
CLN8-208ENST00000635751 PCDH11XQ9BZA7 1347 aa25.74■■□□□ 1.71
CLN8-208ENST00000635751 PCDH11YQ9BZA8 1340 aa25.74■■□□□ 1.71
CLN8-208ENST00000635751 SCN11AQ9UI33 1791 aa25.74■■□□□ 1.71
CLN8-208ENST00000635751 EXOC5O00471 708 aa25.74■■□□□ 1.71
CLN8-208ENST00000635751 SLFN5Q08AF3 891 aa25.74■■□□□ 1.71
CLN8-208ENST00000635751 DDX54Q8TDD1 881 aaKnown RBP25.74■■□□□ 1.71
CLN8-208ENST00000635751 ANP32EQ9BTT0 268 aa25.74■■□□□ 1.71
CLN8-208ENST00000635751 LGR6Q9HBX8 967 aa25.74■■□□□ 1.71
CLN8-208ENST00000635751 PLIN1O60240 522 aa25.72■■□□□ 1.71
CLN8-208ENST00000635751 LRRC37A3O60309 1634 aa25.71■■□□□ 1.71
CLN8-208ENST00000635751 KAT6BQ8WYB5 2073 aa25.71■■□□□ 1.71
CLN8-208ENST00000635751 E9PSI1 815 aa25.71■■□□□ 1.71
CLN8-208ENST00000635751 CALD1Q05682 793 aaKnown RBP25.71■■□□□ 1.71
CLN8-208ENST00000635751 TRMT2AQ8IZ69 625 aaKnown RBP25.71■■□□□ 1.71
CLN8-208ENST00000635751 LAS1LQ9Y4W2 734 aaKnown RBP25.71■■□□□ 1.71
CLN8-208ENST00000635751 IL16Q14005 1332 aa25.71■■□□□ 1.71
CLN8-208ENST00000635751 DDB1Q16531 1140 aa25.7■■□□□ 1.71
CLN8-208ENST00000635751 ZNF772Q68DY9 489 aaPredicted RBP25.7■■□□□ 1.71
CLN8-208ENST00000635751 ADAMTS7Q9UKP4 1686 aa25.7■■□□□ 1.7
CLN8-208ENST00000635751 RNMTO43148 476 aaKnown RBP25.7■■□□□ 1.7
CLN8-208ENST00000635751 ILDR1Q86SU0 546 aaPredicted RBP25.69■■□□□ 1.7
CLN8-208ENST00000635751 TNS2Q63HR2 1409 aa25.69■■□□□ 1.7
CLN8-208ENST00000635751 CEMIPQ8WUJ3 1361 aa25.68■■□□□ 1.7
CLN8-208ENST00000635751 A0A0G2JS52 829 aa25.67■■□□□ 1.7
CLN8-208ENST00000635751 HSP90AB1P08238 724 aaKnown RBP25.67■■□□□ 1.7
CLN8-208ENST00000635751 CRBNQ96SW2 442 aa25.67■■□□□ 1.7
CLN8-208ENST00000635751 KDM6AO15550 1401 aaPredicted RBP25.67■■□□□ 1.7
CLN8-208ENST00000635751 THSD7AQ9UPZ6 1657 aa25.66■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms