RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 ANKIB1Q9P2G1 1089 aa6.5□□□□□ -1.37
SCN1A-209ENST00000635750 MTHFSP49914 203 aa6.5□□□□□ -1.37
SCN1A-209ENST00000635750 CETN1Q12798 172 aa6.5□□□□□ -1.37
SCN1A-209ENST00000635750 VTI1AQ96AJ9 217 aa6.49□□□□□ -1.37
SCN1A-209ENST00000635750 TAOK3Q9H2K8 898 aa6.49□□□□□ -1.37
SCN1A-209ENST00000635750 MKNK2Q9HBH9 465 aa6.49□□□□□ -1.37
SCN1A-209ENST00000635750 CCDC192P0DO97 292 aa6.49□□□□□ -1.37
SCN1A-209ENST00000635750 FAM193AP78312 1265 aa6.49□□□□□ -1.37
SCN1A-209ENST00000635750 CFAP45Q9UL16 551 aa6.49□□□□□ -1.37
SCN1A-209ENST00000635750 CAVIN1Q6NZI2 390 aaKnown RBP6.49□□□□□ -1.37
SCN1A-209ENST00000635750 TNMDQ9H2S6 317 aa6.49□□□□□ -1.37
SCN1A-209ENST00000635750 RAB3IL1Q8TBN0 382 aa6.49□□□□□ -1.37
SCN1A-209ENST00000635750 CTNNBL1Q8WYA6 563 aaPredicted RBP6.49□□□□□ -1.37
SCN1A-209ENST00000635750 RPGRQ92834 1020 aaKnown RBP6.49□□□□□ -1.37
SCN1A-209ENST00000635750 MYL6BP14649 208 aa6.49□□□□□ -1.37
SCN1A-209ENST00000635750 SPA17Q15506 151 aa6.49□□□□□ -1.37
SCN1A-209ENST00000635750 TTC21AQ8NDW8 1320 aa6.49□□□□□ -1.37
SCN1A-209ENST00000635750 SMTNL1A8MU46 457 aa6.49□□□□□ -1.37
SCN1A-209ENST00000635750 LMAN1P49257 510 aa6.49□□□□□ -1.37
SCN1A-209ENST00000635750 CBX1P83916 185 aa6.49□□□□□ -1.37
SCN1A-209ENST00000635750 FKBP15Q5T1M5 1219 aa6.49□□□□□ -1.37
SCN1A-209ENST00000635750 UTP14AQ9BVJ6 771 aaKnown RBP6.49□□□□□ -1.37
SCN1A-209ENST00000635750 VPS8Q8N3P4 1428 aa6.48□□□□□ -1.37
SCN1A-209ENST00000635750 TAF3Q5VWG9 929 aa6.48□□□□□ -1.37
SCN1A-209ENST00000635750 ATF7IPQ6VMQ6 1270 aa6.48□□□□□ -1.37
SCN1A-209ENST00000635750 GIMAP7Q8NHV1 300 aa6.48□□□□□ -1.37
SCN1A-209ENST00000635750 CCDC113Q9H0I3 377 aa6.48□□□□□ -1.37
SCN1A-209ENST00000635750 TMEM266Q2M3C6 531 aa6.48□□□□□ -1.37
SCN1A-209ENST00000635750 BICDL1Q6ZP65 573 aa6.48□□□□□ -1.37
SCN1A-209ENST00000635750 ZMYND15Q9H091 742 aa6.48□□□□□ -1.37
SCN1A-209ENST00000635750 MYO1BO43795 1136 aa6.48□□□□□ -1.37
SCN1A-209ENST00000635750 SMC1AQ14683 1233 aaKnown RBP6.48□□□□□ -1.37
SCN1A-209ENST00000635750 THEMISQ8N1K5 641 aaPredicted RBP6.48□□□□□ -1.37
SCN1A-209ENST00000635750 STAC3Q96MF2 364 aa6.48□□□□□ -1.37
SCN1A-209ENST00000635750 GOPCQ9HD26 462 aa6.48□□□□□ -1.37
SCN1A-209ENST00000635750 PTPRGP23470 1445 aa6.48□□□□□ -1.37
SCN1A-209ENST00000635750 BAG4O95429 457 aaKnown RBP6.48□□□□□ -1.37
SCN1A-209ENST00000635750 MCM3P25205 808 aa6.48□□□□□ -1.37
SCN1A-209ENST00000635750 ZNF354CQ86Y25 554 aa6.48□□□□□ -1.37
SCN1A-209ENST00000635750 TDRD9Q8NDG6 1382 aaKnown RBP6.48□□□□□ -1.37
SCN1A-209ENST00000635750 KIF20AO95235 890 aa6.48□□□□□ -1.37
SCN1A-209ENST00000635750 RFX1P22670 979 aa6.48□□□□□ -1.37
SCN1A-209ENST00000635750 CCT4P50991 539 aaKnown RBP6.48□□□□□ -1.37
SCN1A-209ENST00000635750 CACNA2D4Q7Z3S7 1137 aa6.48□□□□□ -1.37
SCN1A-209ENST00000635750 DZIP1Q86YF9 867 aaKnown RBP6.48□□□□□ -1.37
SCN1A-209ENST00000635750 STXBP4Q6ZWJ1 553 aa6.47□□□□□ -1.37
SCN1A-209ENST00000635750 TXNDC2Q86VQ3 553 aa6.47□□□□□ -1.37
SCN1A-209ENST00000635750 USP47Q96K76 1375 aa6.47□□□□□ -1.37
SCN1A-209ENST00000635750 CCDC96Q2M329 555 aa6.47□□□□□ -1.37
SCN1A-209ENST00000635750 PDIA4P13667 645 aaKnown RBP6.47□□□□□ -1.37
SCN1A-209ENST00000635750 STK3Q13188 491 aa6.47□□□□□ -1.37
SCN1A-209ENST00000635750 MAP9Q49MG5 647 aa6.47□□□□□ -1.37
SCN1A-209ENST00000635750 AIDAQ96BJ3 306 aa6.47□□□□□ -1.37
SCN1A-209ENST00000635750 SRCIN1Q9C0H9 1055 aa6.47□□□□□ -1.37
SCN1A-209ENST00000635750 SIL1Q9H173 461 aa6.47□□□□□ -1.37
SCN1A-209ENST00000635750 KRT85P78386 507 aa6.47□□□□□ -1.37
SCN1A-209ENST00000635750 ZNF444Q8N0Y2 327 aaPredicted RBP6.47□□□□□ -1.37
SCN1A-209ENST00000635750 SPC24Q8NBT2 197 aa6.47□□□□□ -1.37
SCN1A-209ENST00000635750 CEP126Q9P2H0 1117 aa6.47□□□□□ -1.37
SCN1A-209ENST00000635750 KIF4AO95239 1232 aa6.47□□□□□ -1.37
SCN1A-209ENST00000635750 NEK4P51957 841 aa6.47□□□□□ -1.37
SCN1A-209ENST00000635750 UBE4AQ14139 1066 aa6.47□□□□□ -1.37
SCN1A-209ENST00000635750 KRT32Q14532 448 aa6.47□□□□□ -1.37
SCN1A-209ENST00000635750 HDGFL1Q5TGJ6 251 aa6.47□□□□□ -1.37
SCN1A-209ENST00000635750 FAM177A1Q8N128 213 aaPredicted RBP6.47□□□□□ -1.37
SCN1A-209ENST00000635750 PUS7Q96PZ0 661 aaKnown RBP6.47□□□□□ -1.37
SCN1A-209ENST00000635750 UBA5Q9GZZ9 404 aa6.47□□□□□ -1.37
SCN1A-209ENST00000635750 AKAP2Q9Y2D5 859 aa6.47□□□□□ -1.37
SCN1A-209ENST00000635750 IFFO1Q0D2I5 559 aa6.47□□□□□ -1.37
SCN1A-209ENST00000635750 PRDM11Q9NQV5 511 aa6.47□□□□□ -1.37
SCN1A-209ENST00000635750 CCDC178Q5BJE1 867 aa6.47□□□□□ -1.37
SCN1A-209ENST00000635750 DDX12PQ92771 950 aa6.47□□□□□ -1.37
SCN1A-209ENST00000635750 PHAXQ9H814 394 aaKnown RBP6.47□□□□□ -1.37
SCN1A-209ENST00000635750 ABCF2Q9UG63 623 aa6.47□□□□□ -1.37
SCN1A-209ENST00000635750 DHX37Q8IY37 1157 aaKnown RBP6.46□□□□□ -1.37
SCN1A-209ENST00000635750 CCDC196A0A1B0GTZ2 297 aa6.46□□□□□ -1.37
SCN1A-209ENST00000635750 NCBP1Q09161 790 aaKnown RBP6.46□□□□□ -1.37
SCN1A-209ENST00000635750 ACTN2P35609 894 aa6.46□□□□□ -1.38
SCN1A-209ENST00000635750 BMS1Q14692 1282 aaKnown RBP6.46□□□□□ -1.38
SCN1A-209ENST00000635750 BCCIPQ9P287 314 aaKnown RBP eCLIP6.46□□□□□ -1.38
SCN1A-209ENST00000635750 FIBPO43427 364 aa6.46□□□□□ -1.38
SCN1A-209ENST00000635750 ARL1P40616 181 aaPredicted RBP6.46□□□□□ -1.38
SCN1A-209ENST00000635750 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.46□□□□□ -1.38
SCN1A-209ENST00000635750 V9GYY5 206 aaPredicted RBP6.46□□□□□ -1.38
SCN1A-209ENST00000635750 FSD2A1L4K1 749 aa6.46□□□□□ -1.38
SCN1A-209ENST00000635750 BTBD11A6QL63 1104 aa6.46□□□□□ -1.38
SCN1A-209ENST00000635750 CRACR2AQ9BSW2 395 aa6.46□□□□□ -1.38
SCN1A-209ENST00000635750 MACROD2A1Z1Q3 448 aa6.46□□□□□ -1.38
SCN1A-209ENST00000635750 RNF214Q8ND24 703 aa6.46□□□□□ -1.38
SCN1A-209ENST00000635750 IKBKGQ9Y6K9 419 aa6.46□□□□□ -1.38
SCN1A-209ENST00000635750 A0A087WZG4 1122 aa6.45□□□□□ -1.38
SCN1A-209ENST00000635750 CCDC117Q8IWD4 279 aaPredicted RBP6.45□□□□□ -1.38
SCN1A-209ENST00000635750 PRPF31Q8WWY3 499 aaKnown RBP6.45□□□□□ -1.38
SCN1A-209ENST00000635750 GBP3Q9H0R5 595 aa6.45□□□□□ -1.38
SCN1A-209ENST00000635750 FYCO1Q9BQS8 1478 aa6.45□□□□□ -1.38
SCN1A-209ENST00000635750 ARHGAP29Q52LW3 1261 aa6.45□□□□□ -1.38
SCN1A-209ENST00000635750 ODF2LQ9ULJ1 636 aa6.45□□□□□ -1.38
SCN1A-209ENST00000635750 LUZP1Q86V48 1076 aa6.45□□□□□ -1.38
SCN1A-209ENST00000635750 ABCC8Q09428 1581 aa6.45□□□□□ -1.38
SCN1A-209ENST00000635750 CCDC175P0C221 793 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms