RNA–Protein interactions for RNA: ENST00000635739.1

SMARCA2-246, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 4,272 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-246ENST00000635739 UNC13BO14795 1591 aa10.07□□□□□ -0.8
SMARCA2-246ENST00000635739 TTC12Q9H892 705 aaPredicted RBP10.07□□□□□ -0.8
SMARCA2-246ENST00000635739 TSPYL4Q9UJ04 414 aa10.07□□□□□ -0.8
SMARCA2-246ENST00000635739 EXOC6BQ9Y2D4 811 aa10.07□□□□□ -0.8
SMARCA2-246ENST00000635739 RTEL1-TNFRSF6BF6WH68 1400 aa10.06□□□□□ -0.8
SMARCA2-246ENST00000635739 NCOA3Q9Y6Q9 1424 aa10.06□□□□□ -0.8
SMARCA2-246ENST00000635739 HCLS1P14317 486 aaPredicted RBP10.06□□□□□ -0.8
SMARCA2-246ENST00000635739 GPT2Q8TD30 523 aa10.06□□□□□ -0.8
SMARCA2-246ENST00000635739 TRIM5Q9C035 493 aa10.06□□□□□ -0.8
SMARCA2-246ENST00000635739 GSPT1P15170 499 aaKnown RBP10.06□□□□□ -0.8
SMARCA2-246ENST00000635739 INTS4Q96HW7 963 aaKnown RBP10.06□□□□□ -0.8
SMARCA2-246ENST00000635739 PLEKHF1Q96S99 279 aa10.06□□□□□ -0.8
SMARCA2-246ENST00000635739 KIF2CQ99661 725 aa10.06□□□□□ -0.8
SMARCA2-246ENST00000635739 PPIP5K1Q6PFW1 1433 aa10.06□□□□□ -0.8
SMARCA2-246ENST00000635739 TRPM2O94759 1503 aa10.05□□□□□ -0.8
SMARCA2-246ENST00000635739 MX1P20591 662 aa10.05□□□□□ -0.8
SMARCA2-246ENST00000635739 ANAPC15P60006 121 aa10.05□□□□□ -0.8
SMARCA2-246ENST00000635739 DCTN1Q14203 1278 aa10.05□□□□□ -0.8
SMARCA2-246ENST00000635739 C8orf58Q8NAV2 365 aa10.05□□□□□ -0.8
SMARCA2-246ENST00000635739 PDLIM2Q96JY6 352 aa10.05□□□□□ -0.8
SMARCA2-246ENST00000635739 ADGRL1O94910 1474 aa10.05□□□□□ -0.8
SMARCA2-246ENST00000635739 BECN2A8MW95 431 aa10.05□□□□□ -0.8
SMARCA2-246ENST00000635739 USP48Q86UV5 1035 aa10.05□□□□□ -0.8
SMARCA2-246ENST00000635739 GTPBP4Q9BZE4 634 aaKnown RBP10.05□□□□□ -0.8
SMARCA2-246ENST00000635739 PDE1AP54750 535 aa10.05□□□□□ -0.8
SMARCA2-246ENST00000635739 TPD52L1Q16890 204 aaPredicted RBP10.05□□□□□ -0.8
SMARCA2-246ENST00000635739 PIBF1Q8WXW3 757 aa10.05□□□□□ -0.8
SMARCA2-246ENST00000635739 UBE2HP62256 183 aa10.04□□□□□ -0.8
SMARCA2-246ENST00000635739 AEBP1Q8IUX7 1158 aa10.04□□□□□ -0.8
SMARCA2-246ENST00000635739 CCDC112Q8NEF3 446 aa10.04□□□□□ -0.8
SMARCA2-246ENST00000635739 BICD2Q8TD16 824 aa10.04□□□□□ -0.8
SMARCA2-246ENST00000635739 CHMP4AQ9BY43 222 aa10.04□□□□□ -0.8
SMARCA2-246ENST00000635739 PREX2Q70Z35 1606 aa10.04□□□□□ -0.8
SMARCA2-246ENST00000635739 A0A1W2PP64 1363 aa10.04□□□□□ -0.8
SMARCA2-246ENST00000635739 PTPRCP08575 1304 aa10.04□□□□□ -0.8
SMARCA2-246ENST00000635739 BRPF1P55201 1214 aaPredicted RBP10.04□□□□□ -0.8
SMARCA2-246ENST00000635739 SULT6B1Q6IMI4 303 aa10.04□□□□□ -0.8
SMARCA2-246ENST00000635739 CNTROBQ8N137 903 aa10.04□□□□□ -0.8
SMARCA2-246ENST00000635739 OTUD7AQ8TE49 926 aaPredicted RBP10.04□□□□□ -0.8
SMARCA2-246ENST00000635739 UBTFL1P0CB47 393 aaPredicted RBP10.04□□□□□ -0.8
SMARCA2-246ENST00000635739 CEP85Q6P2H3 762 aa10.04□□□□□ -0.8
SMARCA2-246ENST00000635739 ESYT1Q9BSJ8 1104 aa10.04□□□□□ -0.8
SMARCA2-246ENST00000635739 SLC52A1Q9NWF4 448 aa10.04□□□□□ -0.8
SMARCA2-246ENST00000635739 MADDQ8WXG6 1647 aa10.03□□□□□ -0.8
SMARCA2-246ENST00000635739 CCDC66A2RUB6 948 aa10.03□□□□□ -0.8
SMARCA2-246ENST00000635739 SURF6O75683 361 aaKnown RBP10.03□□□□□ -0.8
SMARCA2-246ENST00000635739 PDCP20941 246 aa10.03□□□□□ -0.8
SMARCA2-246ENST00000635739 TAF3Q5VWG9 929 aa10.03□□□□□ -0.8
SMARCA2-246ENST00000635739 PHACTR3Q96KR7 559 aa10.03□□□□□ -0.8
SMARCA2-246ENST00000635739 MEIS3Q99687 375 aa10.03□□□□□ -0.8
SMARCA2-246ENST00000635739 SPDYE4A6NLX3 237 aa10.03□□□□□ -0.8
SMARCA2-246ENST00000635739 KRT85P78386 507 aa10.03□□□□□ -0.8
SMARCA2-246ENST00000635739 HDAC5Q9UQL6 1122 aa10.03□□□□□ -0.8
SMARCA2-246ENST00000635739 EMILIN1Q9Y6C2 1016 aa10.03□□□□□ -0.8
SMARCA2-246ENST00000635739 ABCC4O15439 1325 aa10.03□□□□□ -0.8
SMARCA2-246ENST00000635739 BRD1O95696 1058 aa10.03□□□□□ -0.8
SMARCA2-246ENST00000635739 MLECQ14165 292 aa10.02□□□□□ -0.8
SMARCA2-246ENST00000635739 NECTIN2Q92692 538 aa10.02□□□□□ -0.8
SMARCA2-246ENST00000635739 NUP62CLQ9H1M0 184 aa10.02□□□□□ -0.8
SMARCA2-246ENST00000635739 STX6O43752 255 aa10.02□□□□□ -0.81
SMARCA2-246ENST00000635739 HSP90AB4PQ58FF6 505 aa10.02□□□□□ -0.81
SMARCA2-246ENST00000635739 MYOM2P54296 1465 aa10.02□□□□□ -0.81
SMARCA2-246ENST00000635739 MAP3K11Q16584 847 aa10.02□□□□□ -0.81
SMARCA2-246ENST00000635739 TNMDQ9H2S6 317 aa10.02□□□□□ -0.81
SMARCA2-246ENST00000635739 POLKQ9UBT6 870 aa10.02□□□□□ -0.81
SMARCA2-246ENST00000635739 NAP1L2Q9ULW6 460 aaPredicted RBP10.02□□□□□ -0.81
SMARCA2-246ENST00000635739 FAM83GA6ND36 823 aa10.02□□□□□ -0.81
SMARCA2-246ENST00000635739 H3BQV1 296 aa10.02□□□□□ -0.81
SMARCA2-246ENST00000635739 FBLN1P23142 703 aa10.02□□□□□ -0.81
SMARCA2-246ENST00000635739 HDGFP51858 240 aaKnown RBP10.02□□□□□ -0.81
SMARCA2-246ENST00000635739 IFFO2Q5TF58 517 aa10.02□□□□□ -0.81
SMARCA2-246ENST00000635739 LIMCH1Q9UPQ0 1083 aa10.02□□□□□ -0.81
SMARCA2-246ENST00000635739 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.01□□□□□ -0.81
SMARCA2-246ENST00000635739 ZSCAN22P10073 491 aaPredicted RBP10.01□□□□□ -0.81
SMARCA2-246ENST00000635739 CCDC30Q5VVM6 783 aa10.01□□□□□ -0.81
SMARCA2-246ENST00000635739 ZSCAN31Q96LW9 406 aaPredicted RBP10.01□□□□□ -0.81
SMARCA2-246ENST00000635739 ERCC6L2Q5T890 1561 aa10.01□□□□□ -0.81
SMARCA2-246ENST00000635739 KDM4AO75164 1064 aa10.01□□□□□ -0.81
SMARCA2-246ENST00000635739 RRS1Q15050 365 aaKnown RBP10.01□□□□□ -0.81
SMARCA2-246ENST00000635739 TSHZ3Q63HK5 1081 aa10.01□□□□□ -0.81
SMARCA2-246ENST00000635739 GIMAP6Q6P9H5 292 aa10.01□□□□□ -0.81
SMARCA2-246ENST00000635739 SIRT2Q8IXJ6 389 aa10.01□□□□□ -0.81
SMARCA2-246ENST00000635739 CYP46A1Q9Y6A2 500 aa10.01□□□□□ -0.81
SMARCA2-246ENST00000635739 KIF20AO95235 890 aa10.01□□□□□ -0.81
SMARCA2-246ENST00000635739 PDIA4P13667 645 aaKnown RBP10.01□□□□□ -0.81
SMARCA2-246ENST00000635739 TPM4P67936 248 aa10.01□□□□□ -0.81
SMARCA2-246ENST00000635739 RNF20Q5VTR2 975 aa10.01□□□□□ -0.81
SMARCA2-246ENST00000635739 CHAMP1Q96JM3 812 aa10.01□□□□□ -0.81
SMARCA2-246ENST00000635739 IL1RAPL2Q9NP60 686 aa10.01□□□□□ -0.81
SMARCA2-246ENST00000635739 CNPY2Q9Y2B0 182 aa10.01□□□□□ -0.81
SMARCA2-246ENST00000635739 HSP90B1P14625 803 aaKnown RBP10□□□□□ -0.81
SMARCA2-246ENST00000635739 LARP1BQ659C4 914 aaKnown RBP10□□□□□ -0.81
SMARCA2-246ENST00000635739 F6X3S4 739 aa10□□□□□ -0.81
SMARCA2-246ENST00000635739 AMPHP49418 695 aa10□□□□□ -0.81
SMARCA2-246ENST00000635739 FAM69CQ0P6D2 419 aa10□□□□□ -0.81
SMARCA2-246ENST00000635739 FANCAO15360 1455 aa10□□□□□ -0.81
SMARCA2-246ENST00000635739 MCM10Q7L590 875 aa10□□□□□ -0.81
SMARCA2-246ENST00000635739 ZFYVE9O95405 1425 aa10□□□□□ -0.81
SMARCA2-246ENST00000635739 KIF24Q5T7B8 1368 aa9.99□□□□□ -0.81
SMARCA2-246ENST00000635739 IFIT2P09913 472 aaKnown RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms