RNA–Protein interactions for RNA: ENST00000635406.1

ATP7B-216, Transcript of ATPase copper transporting beta, humanhuman

TSL 4

Gene ATP7B, Length 506 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP7B-216ENST00000635406 RGPD3A6NKT7 1758 aaPredicted RBP28.55■■■□□ 2.16
ATP7B-216ENST00000635406 RGPD4Q7Z3J3 1758 aa28.55■■■□□ 2.16
ATP7B-216ENST00000635406 NUP188Q5SRE5 1749 aa28.54■■■□□ 2.16
ATP7B-216ENST00000635406 EZH2Q15910 746 aaKnown RBP28.53■■■□□ 2.16
ATP7B-216ENST00000635406 DDX54Q8TDD1 881 aaKnown RBP28.53■■■□□ 2.16
ATP7B-216ENST00000635406 RAPGEF4Q8WZA2 1011 aa28.53■■■□□ 2.16
ATP7B-216ENST00000635406 KAT6BQ8WYB5 2073 aa28.53■■■□□ 2.16
ATP7B-216ENST00000635406 BTAF1O14981 1849 aa28.52■■■□□ 2.16
ATP7B-216ENST00000635406 TATP17735 454 aaPredicted RBP28.51■■■□□ 2.15
ATP7B-216ENST00000635406 ZCRB1Q8TBF4 217 aaKnown RBP28.51■■■□□ 2.15
ATP7B-216ENST00000635406 ACSBG1Q96GR2 724 aa28.51■■■□□ 2.15
ATP7B-216ENST00000635406 CAMKK2Q96RR4 588 aa28.51■■■□□ 2.15
ATP7B-216ENST00000635406 BCL11BQ9C0K0 894 aaPredicted RBP28.5■■■□□ 2.15
ATP7B-216ENST00000635406 KCNQ2O43526 872 aa28.49■■■□□ 2.15
ATP7B-216ENST00000635406 IGSF1Q8N6C5 1336 aa28.48■■■□□ 2.15
ATP7B-216ENST00000635406 MTHFSP49914 203 aa28.47■■■□□ 2.15
ATP7B-216ENST00000635406 PARD3Q8TEW0 1356 aa28.47■■■□□ 2.15
ATP7B-216ENST00000635406 TOGARAM1Q9Y4F4 1720 aa28.46■■■□□ 2.15
ATP7B-216ENST00000635406 COL3A1P02461 1466 aaPredicted RBP28.45■■■□□ 2.14
ATP7B-216ENST00000635406 SRCAPQ6ZRS2 3230 aa28.43■■■□□ 2.14
ATP7B-216ENST00000635406 PCDH11XQ9BZA7 1347 aa28.43■■■□□ 2.14
ATP7B-216ENST00000635406 PCDH11YQ9BZA8 1340 aa28.43■■■□□ 2.14
ATP7B-216ENST00000635406 IL13P35225 146 aa28.42■■■□□ 2.14
ATP7B-216ENST00000635406 ZEB1P37275 1124 aaPredicted RBP28.42■■■□□ 2.14
ATP7B-216ENST00000635406 AEBP1Q8IUX7 1158 aa28.41■■■□□ 2.14
ATP7B-216ENST00000635406 CYP27B1O15528 508 aa28.4■■■□□ 2.14
ATP7B-216ENST00000635406 ITGB4P16144 1822 aa28.37■■■□□ 2.13
ATP7B-216ENST00000635406 PLSCR1O15162 318 aa28.37■■■□□ 2.13
ATP7B-216ENST00000635406 KDRP35968 1356 aa28.36■■■□□ 2.13
ATP7B-216ENST00000635406 PSDA5PKW4 1024 aaPredicted RBP28.35■■■□□ 2.13
ATP7B-216ENST00000635406 SYTL4Q96C24 671 aaPredicted RBP28.35■■■□□ 2.13
ATP7B-216ENST00000635406 PRIM1P49642 420 aaKnown RBP28.34■■■□□ 2.13
ATP7B-216ENST00000635406 SULT6B1Q6IMI4 303 aa28.34■■■□□ 2.13
ATP7B-216ENST00000635406 SPG7Q9UQ90 795 aa28.34■■■□□ 2.13
ATP7B-216ENST00000635406 PLEKHG2Q9H7P9 1386 aa28.34■■■□□ 2.13
ATP7B-216ENST00000635406 PROM2Q8N271 834 aa28.33■■■□□ 2.13
ATP7B-216ENST00000635406 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.32■■■□□ 2.121e-7■■■□□ 15.1
ATP7B-216ENST00000635406 LY75O60449 1722 aa28.32■■■□□ 2.12
ATP7B-216ENST00000635406 DIAPH1O60610 1272 aaKnown RBP28.31■■■□□ 2.12
ATP7B-216ENST00000635406 PPP2R1AP30153 589 aa28.31■■■□□ 2.12
ATP7B-216ENST00000635406 DDX10Q13206 875 aaKnown RBP28.31■■■□□ 2.12
ATP7B-216ENST00000635406 PAPPAQ13219 1627 aa28.3■■■□□ 2.12
ATP7B-216ENST00000635406 PHKG2P15735 406 aa28.29■■■□□ 2.12
ATP7B-216ENST00000635406 R3HDM1Q15032 1099 aaKnown RBP28.29■■■□□ 2.12
ATP7B-216ENST00000635406 TXNRD1Q16881 649 aa28.29■■■□□ 2.12
ATP7B-216ENST00000635406 ANO8Q9HCE9 1232 aaPredicted RBP28.29■■■□□ 2.12
ATP7B-216ENST00000635406 HMOX1P09601 288 aa28.28■■■□□ 2.12
ATP7B-216ENST00000635406 NKX1-1Q15270 411 aaPredicted RBP28.26■■■□□ 2.11
ATP7B-216ENST00000635406 IFNL2Q8IZJ0 200 aa28.25■■■□□ 2.11
ATP7B-216ENST00000635406 PLEKHO1Q53GL0 409 aaPredicted RBP28.23■■■□□ 2.11
ATP7B-216ENST00000635406 ZNF530Q6P9A1 599 aaPredicted RBP28.23■■■□□ 2.11
ATP7B-216ENST00000635406 KDM6AO15550 1401 aaPredicted RBP28.23■■■□□ 2.11
ATP7B-216ENST00000635406 VIRMAQ69YN4 1812 aaKnown RBP28.22■■■□□ 2.11
ATP7B-216ENST00000635406 U2SURPO15042 1029 aaKnown RBP28.21■■■□□ 2.11
ATP7B-216ENST00000635406 AMOTQ4VCS5 1084 aa28.21■■■□□ 2.11
ATP7B-216ENST00000635406 MPRIPQ6WCQ1 1025 aa28.21■■■□□ 2.11
ATP7B-216ENST00000635406 LRRC4BQ9NT99 713 aa28.21■■■□□ 2.11
ATP7B-216ENST00000635406 NBPF14Q5TI25 921 aa28.2■■■□□ 2.1
ATP7B-216ENST00000635406 CFAP53Q96M91 514 aa28.2■■■□□ 2.1
ATP7B-216ENST00000635406 CASZ1Q86V15 1759 aa28.19■■■□□ 2.1
ATP7B-216ENST00000635406 SCN11AQ9UI33 1791 aa28.19■■■□□ 2.1
ATP7B-216ENST00000635406 LRP5O75197 1615 aa28.18■■■□□ 2.1
ATP7B-216ENST00000635406 KCNQ4P56696 695 aa28.18■■■□□ 2.1
ATP7B-216ENST00000635406 TUBGCP6Q96RT7 1819 aa28.17■■■□□ 2.1
ATP7B-216ENST00000635406 PIGBQ92521 554 aa28.16■■■□□ 2.1
ATP7B-216ENST00000635406 C5P01031 1676 aa28.16■■■□□ 2.1
ATP7B-216ENST00000635406 PALLDQ8WX93 1383 aa28.15■■■□□ 2.1
ATP7B-216ENST00000635406 TAF1LQ8IZX4 1826 aa28.15■■■□□ 2.1
ATP7B-216ENST00000635406 ZNF827Q17R98 1081 aa28.13■■■□□ 2.09
ATP7B-216ENST00000635406 C1orf141Q5JVX7 400 aa28.13■■■□□ 2.09
ATP7B-216ENST00000635406 TMOD3Q9NYL9 352 aa28.13■■■□□ 2.09
ATP7B-216ENST00000635406 SLC27A3Q5K4L6 730 aa28.12■■■□□ 2.09
ATP7B-216ENST00000635406 DCAF5Q96JK2 942 aa28.12■■■□□ 2.09
ATP7B-216ENST00000635406 ADAMTS7Q9UKP4 1686 aa28.12■■■□□ 2.09
ATP7B-216ENST00000635406 HSP90AB1P08238 724 aaKnown RBP28.11■■■□□ 2.09
ATP7B-216ENST00000635406 MTHFSDQ2M296 383 aaKnown RBP28.11■■■□□ 2.09
ATP7B-216ENST00000635406 STK32BQ9NY57 414 aa28.11■■■□□ 2.09
ATP7B-216ENST00000635406 SLC15A2Q16348 729 aa28.1■■■□□ 2.09
ATP7B-216ENST00000635406 PDGFDQ9GZP0 370 aaPredicted RBP28.1■■■□□ 2.09
ATP7B-216ENST00000635406 RSPH6AQ9H0K4 717 aa28.1■■■□□ 2.09
ATP7B-216ENST00000635406 CCNL1Q9UK58 526 aaPredicted RBP28.1■■■□□ 2.09
ATP7B-216ENST00000635406 QSER1Q2KHR3 1735 aa28.09■■■□□ 2.09
ATP7B-216ENST00000635406 RALBP1Q15311 655 aa28.09■■■□□ 2.09
ATP7B-216ENST00000635406 ERVV-2B6SEH9 535 aa28.08■■■□□ 2.09
ATP7B-216ENST00000635406 ASAP1Q9ULH1 1129 aa28.08■■■□□ 2.09
ATP7B-216ENST00000635406 NUDCQ9Y266 331 aa28.08■■■□□ 2.09
ATP7B-216ENST00000635406 MRC1P22897 1456 aa28.08■■■□□ 2.09
ATP7B-216ENST00000635406 U2AF1L5P0DN76 240 aaPredicted RBP28.07■■■□□ 2.08
ATP7B-216ENST00000635406 PRKAR2BP31323 418 aa28.07■■■□□ 2.08
ATP7B-216ENST00000635406 U2AF1Q01081 240 aaKnown RBP eCLIP28.07■■■□□ 2.08
ATP7B-216ENST00000635406 AKAP4Q5JQC9 854 aa28.07■■■□□ 2.08
ATP7B-216ENST00000635406 SMARCC1Q92922 1105 aaPredicted RBP28.05■■■□□ 2.08
ATP7B-216ENST00000635406 AKT1S1Q96B36 256 aa28.05■■■□□ 2.08
ATP7B-216ENST00000635406 C4BP0C0L5 1744 aa28.04■■■□□ 2.08
ATP7B-216ENST00000635406 PHACTR3Q96KR7 559 aa28.04■■■□□ 2.08
ATP7B-216ENST00000635406 ATG3Q9NT62 314 aa28.04■■■□□ 2.08
ATP7B-216ENST00000635406 MYBBP1AQ9BQG0 1328 aaKnown RBP28.03■■■□□ 2.08
ATP7B-216ENST00000635406 ZNF316A6NFI3 1004 aaPredicted RBP28.03■■■□□ 2.08
ATP7B-216ENST00000635406 CABP4P57796 275 aa28.03■■■□□ 2.08
ATP7B-216ENST00000635406 LGR6Q9HBX8 967 aa28.03■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms