RNA–Protein interactions for RNA: ENST00000632421.1

PHACTR4-206, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 2

Gene PHACTR4, Length 3,375 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-206ENST00000632421 CRB1P82279 1406 aa15.44■□□□□ 0.06
PHACTR4-206ENST00000632421 SEC24BO95487 1268 aa15.44■□□□□ 0.06
PHACTR4-206ENST00000632421 MTHFSDQ2M296 383 aaKnown RBP15.44■□□□□ 0.06
PHACTR4-206ENST00000632421 RTF1Q92541 710 aaKnown RBP15.43■□□□□ 0.06
PHACTR4-206ENST00000632421 HOXC9P31274 260 aa15.43■□□□□ 0.06
PHACTR4-206ENST00000632421 GAS2L2Q8NHY3 880 aa15.42■□□□□ 0.06
PHACTR4-206ENST00000632421 FOXO3O43524 673 aa15.42■□□□□ 0.06
PHACTR4-206ENST00000632421 UPF2Q9HAU5 1272 aaKnown RBP15.42■□□□□ 0.06
PHACTR4-206ENST00000632421 ADGRL3Q9HAR2 1447 aa15.42■□□□□ 0.06
PHACTR4-206ENST00000632421 SLC4A3P48751 1232 aa15.41■□□□□ 0.06
PHACTR4-206ENST00000632421 KRT24Q2M2I5 525 aa15.41■□□□□ 0.06
PHACTR4-206ENST00000632421 NUCB1Q02818 461 aa15.41■□□□□ 0.06
PHACTR4-206ENST00000632421 C14orf37Q86TY3 774 aa15.41■□□□□ 0.06
PHACTR4-206ENST00000632421 RBM33Q96EV2 1170 aaKnown RBP15.41■□□□□ 0.06
PHACTR4-206ENST00000632421 NPHP4O75161 1426 aaPredicted RBP15.4■□□□□ 0.06
PHACTR4-206ENST00000632421 C1orf115Q9H7X2 142 aa15.4■□□□□ 0.06
PHACTR4-206ENST00000632421 RTL1A6NKG5 1358 aa15.39■□□□□ 0.05
PHACTR4-206ENST00000632421 GCC1Q96CN9 775 aa15.39■□□□□ 0.05
PHACTR4-206ENST00000632421 HTATSF1O43719 755 aaKnown RBP15.38■□□□□ 0.05
PHACTR4-206ENST00000632421 TSPYL4Q9UJ04 414 aa15.38■□□□□ 0.05
PHACTR4-206ENST00000632421 NWD1Q149M9 1564 aa15.38■□□□□ 0.05
PHACTR4-206ENST00000632421 CHD1LQ86WJ1 897 aa15.38■□□□□ 0.05
PHACTR4-206ENST00000632421 ESCO1Q5FWF5 840 aa15.38■□□□□ 0.05
PHACTR4-206ENST00000632421 INTS3Q68E01 1043 aaKnown RBP15.37■□□□□ 0.05
PHACTR4-206ENST00000632421 LNPKQ9C0E8 428 aa15.37■□□□□ 0.05
PHACTR4-206ENST00000632421 MIS18AQ9NYP9 233 aa15.37■□□□□ 0.05
PHACTR4-206ENST00000632421 LTN1O94822 1766 aa15.37■□□□□ 0.05
PHACTR4-206ENST00000632421 PTPRCP08575 1304 aa15.37■□□□□ 0.05
PHACTR4-206ENST00000632421 PSME1Q06323 249 aa15.37■□□□□ 0.05
PHACTR4-206ENST00000632421 LTV1Q96GA3 475 aaPredicted RBP15.37■□□□□ 0.05
PHACTR4-206ENST00000632421 RGS12O14924 1447 aa15.37■□□□□ 0.05
PHACTR4-206ENST00000632421 TBC1D32Q96NH3 1257 aa15.36■□□□□ 0.05
PHACTR4-206ENST00000632421 LRRC37A3O60309 1634 aa15.36■□□□□ 0.05
PHACTR4-206ENST00000632421 GNAT3A8MTJ3 354 aa15.36■□□□□ 0.05
PHACTR4-206ENST00000632421 SIRT2Q8IXJ6 389 aa15.35■□□□□ 0.05
PHACTR4-206ENST00000632421 NFAT5O94916 1531 aa15.35■□□□□ 0.05
PHACTR4-206ENST00000632421 ANKRD45Q5TZF3 282 aa15.35■□□□□ 0.05
PHACTR4-206ENST00000632421 IP6K1Q92551 441 aa15.34■□□□□ 0.05
PHACTR4-206ENST00000632421 USP35Q9P2H5 1018 aa15.34■□□□□ 0.05
PHACTR4-206ENST00000632421 MAP3K5Q99683 1374 aa15.34■□□□□ 0.05
PHACTR4-206ENST00000632421 SLC4A2P04920 1241 aa15.34■□□□□ 0.05
PHACTR4-206ENST00000632421 BECN1Q14457 450 aa15.34■□□□□ 0.05
PHACTR4-206ENST00000632421 KCNH5Q8NCM2 988 aa15.33■□□□□ 0.04
PHACTR4-206ENST00000632421 EIF5BO60841 1220 aaKnown RBP15.32■□□□□ 0.04
PHACTR4-206ENST00000632421 BRPF3Q9ULD4 1205 aa15.32■□□□□ 0.04
PHACTR4-206ENST00000632421 MSH6P52701 1360 aa15.31■□□□□ 0.04
PHACTR4-206ENST00000632421 USHBP1Q8N6Y0 703 aa15.31■□□□□ 0.04
PHACTR4-206ENST00000632421 MFAP1P55081 439 aaKnown RBP15.3■□□□□ 0.04
PHACTR4-206ENST00000632421 BMP2KLQ5H9B9 411 aa15.3■□□□□ 0.04
PHACTR4-206ENST00000632421 PHRF1Q9P1Y6 1649 aaKnown RBP15.3■□□□□ 0.04
PHACTR4-206ENST00000632421 IL17REQ8NFR9 667 aa15.3■□□□□ 0.04
PHACTR4-206ENST00000632421 ORAI2Q96SN7 254 aa15.3■□□□□ 0.04
PHACTR4-206ENST00000632421 STK31Q9BXU1 1019 aa15.3■□□□□ 0.04
PHACTR4-206ENST00000632421 BABAM1Q9NWV8 329 aa15.3■□□□□ 0.04
PHACTR4-206ENST00000632421 ANKRD44Q8N8A2 993 aa15.29■□□□□ 0.04
PHACTR4-206ENST00000632421 ATP10DQ9P241 1426 aa15.29■□□□□ 0.04
PHACTR4-206ENST00000632421 C22orf23Q9BZE7 217 aa15.29■□□□□ 0.04
PHACTR4-206ENST00000632421 ZBTB7CA1YPR0 619 aa15.28■□□□□ 0.04
PHACTR4-206ENST00000632421 TAF7Q15545 349 aaPredicted RBP15.28■□□□□ 0.04
PHACTR4-206ENST00000632421 RPAP2Q8IXW5 612 aaPredicted RBP15.28■□□□□ 0.04
PHACTR4-206ENST00000632421 DCTPP1Q9H773 170 aa15.28■□□□□ 0.04
PHACTR4-206ENST00000632421 SOS1Q07889 1333 aaPredicted RBP15.28■□□□□ 0.04
PHACTR4-206ENST00000632421 G2E3Q7L622 706 aa15.28■□□□□ 0.04
PHACTR4-206ENST00000632421 CCDC30Q5VVM6 783 aa15.28■□□□□ 0.04
PHACTR4-206ENST00000632421 NBPF6Q5VWK0 638 aa15.28■□□□□ 0.04
PHACTR4-206ENST00000632421 PROSER2Q86WR7 435 aaPredicted RBP15.28■□□□□ 0.04
PHACTR4-206ENST00000632421 NBPF4Q96M43 638 aa15.28■□□□□ 0.04
PHACTR4-206ENST00000632421 FAM208AQ9UK61 1670 aaKnown RBP15.27■□□□□ 0.04
PHACTR4-206ENST00000632421 CCT4P50991 539 aaKnown RBP15.27■□□□□ 0.04
PHACTR4-206ENST00000632421 CEP85Q6P2H3 762 aa15.27■□□□□ 0.04
PHACTR4-206ENST00000632421 MEIS3Q99687 375 aa15.27■□□□□ 0.04
PHACTR4-206ENST00000632421 XPCQ01831 940 aaPredicted RBP15.27■□□□□ 0.03
PHACTR4-206ENST00000632421 NFKBIBQ15653 356 aa15.26■□□□□ 0.03
PHACTR4-206ENST00000632421 SLIT3O75094 1523 aa15.26■□□□□ 0.03
PHACTR4-206ENST00000632421 GCP02774 474 aa15.26■□□□□ 0.03
PHACTR4-206ENST00000632421 SLC4A10Q6U841 1118 aa15.26■□□□□ 0.03
PHACTR4-206ENST00000632421 CACNA1FO60840 1977 aa15.25■□□□□ 0.03
PHACTR4-206ENST00000632421 F6X3S4 739 aa15.25■□□□□ 0.03
PHACTR4-206ENST00000632421 CEMIPQ8WUJ3 1361 aa15.25■□□□□ 0.03
PHACTR4-206ENST00000632421 RGPD2P0DJD1 1756 aa15.25■□□□□ 0.03
PHACTR4-206ENST00000632421 KIF1AQ12756 1690 aa15.24■□□□□ 0.03
PHACTR4-206ENST00000632421 FLIIQ13045 1269 aa15.24■□□□□ 0.03
PHACTR4-206ENST00000632421 TRPM3Q9HCF6 1732 aaPredicted RBP15.24■□□□□ 0.03
PHACTR4-206ENST00000632421 LMOD2Q6P5Q4 547 aa15.24■□□□□ 0.03
PHACTR4-206ENST00000632421 ARHGEF25Q86VW2 580 aa15.24■□□□□ 0.03
PHACTR4-206ENST00000632421 TBC1D2Q9BYX2 928 aa15.24■□□□□ 0.03
PHACTR4-206ENST00000632421 C19orf44Q9H6X5 657 aa15.23■□□□□ 0.03
PHACTR4-206ENST00000632421 C1orf167Q5SNV9 1468 aa15.23■□□□□ 0.03
PHACTR4-206ENST00000632421 FKBP5Q13451 457 aaPredicted RBP15.23■□□□□ 0.03
PHACTR4-206ENST00000632421 KRT28Q7Z3Y7 464 aa15.23■□□□□ 0.03
PHACTR4-206ENST00000632421 NECTIN2Q92692 538 aa15.23■□□□□ 0.03
PHACTR4-206ENST00000632421 LRRC59Q96AG4 307 aaKnown RBP15.23■□□□□ 0.03
PHACTR4-206ENST00000632421 HMMRO75330 724 aa15.22■□□□□ 0.03
PHACTR4-206ENST00000632421 MED1Q15648 1581 aaPredicted RBP15.22■□□□□ 0.03
PHACTR4-206ENST00000632421 PLEKHM2Q8IWE5 1019 aa15.22■□□□□ 0.03
PHACTR4-206ENST00000632421 PLEKHG5O94827 1062 aa15.22■□□□□ 0.03
PHACTR4-206ENST00000632421 PLEKHO1Q53GL0 409 aaPredicted RBP15.21■□□□□ 0.03
PHACTR4-206ENST00000632421 LMO7Q8WWI1 1683 aa15.21■□□□□ 0.03
PHACTR4-206ENST00000632421 NCAPD2Q15021 1401 aa15.21■□□□□ 0.02
PHACTR4-206ENST00000632421 RBM25P49756 843 aaKnown RBP15.21■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms