RNA–Protein interactions for RNA: ENST00000630866.1

SPTAN1-223, Transcript of spectrin alpha, non-erythrocytic 1, human

TSL 5 BASIC

Gene SPTAN1, Length 7,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPTAN1-223	ENST00000630866	WDR78	Q5VTH9	848 aa		10.25	□□□□□ -0.77
SPTAN1-223	ENST00000630866	HSP90AA2P	Q14568	343 aa	Predicted RBP	10.25	□□□□□ -0.77
SPTAN1-223	ENST00000630866	NFE2L2	Q16236	605 aa		10.25	□□□□□ -0.77
SPTAN1-223	ENST00000630866	OLFM4	Q6UX06	510 aa		10.24	□□□□□ -0.77
SPTAN1-223	ENST00000630866	ZNF771	Q7L3S4	317 aa	Predicted RBP	10.24	□□□□□ -0.77
SPTAN1-223	ENST00000630866	TEX13A	Q9BXU3	409 aa	Predicted RBP	10.24	□□□□□ -0.77
SPTAN1-223	ENST00000630866	AKAP2	Q9Y2D5	859 aa		10.24	□□□□□ -0.77
SPTAN1-223	ENST00000630866	GRM1	Q13255	1194 aa		10.24	□□□□□ -0.77
SPTAN1-223	ENST00000630866	DZIP1	Q86YF9	867 aa	Known RBP	10.24	□□□□□ -0.77
SPTAN1-223	ENST00000630866	ZNF76	P36508	570 aa		10.24	□□□□□ -0.77
SPTAN1-223	ENST00000630866	TAF7	Q15545	349 aa	Predicted RBP	10.24	□□□□□ -0.77
SPTAN1-223	ENST00000630866	UBAC1	Q9BSL1	405 aa		10.24	□□□□□ -0.77
SPTAN1-223	ENST00000630866	POLR3D	P05423	398 aa	Predicted RBP	10.24	□□□□□ -0.77
SPTAN1-223	ENST00000630866	ST5	P78524	1137 aa		10.24	□□□□□ -0.77
SPTAN1-223	ENST00000630866	CHRNA2	Q15822	529 aa		10.24	□□□□□ -0.77
SPTAN1-223	ENST00000630866	NME9	Q86XW9	330 aa		10.24	□□□□□ -0.77
SPTAN1-223	ENST00000630866	WDR63	Q8IWG1	891 aa		10.23	□□□□□ -0.77
SPTAN1-223	ENST00000630866	MIS18A	Q9NYP9	233 aa		10.23	□□□□□ -0.77
SPTAN1-223	ENST00000630866	SLF2	Q8IX21	1173 aa		10.23	□□□□□ -0.77
SPTAN1-223	ENST00000630866	FMNL2	Q96PY5	1086 aa		10.23	□□□□□ -0.77
SPTAN1-223	ENST00000630866	HSPA2	P54652	639 aa		10.23	□□□□□ -0.77
SPTAN1-223	ENST00000630866	GCC1	Q96CN9	775 aa		10.23	□□□□□ -0.77
SPTAN1-223	ENST00000630866	URB2	Q14146	1524 aa	Known RBP	10.23	□□□□□ -0.77
SPTAN1-223	ENST00000630866	IFIT5	Q13325	482 aa	Known RBP	10.23	□□□□□ -0.77
SPTAN1-223	ENST00000630866	MYD88	Q99836	296 aa		10.23	□□□□□ -0.77
SPTAN1-223	ENST00000630866	IFNL2	Q8IZJ0	200 aa		10.23	□□□□□ -0.77
SPTAN1-223	ENST00000630866	TMEM87A	Q8NBN3	555 aa		10.23	□□□□□ -0.77
SPTAN1-223	ENST00000630866	AIDA	Q96BJ3	306 aa		10.23	□□□□□ -0.77
SPTAN1-223	ENST00000630866	ASXL2	Q76L83	1435 aa		10.23	□□□□□ -0.77
SPTAN1-223	ENST00000630866		A0A087WZG4	1122 aa		10.22	□□□□□ -0.77
SPTAN1-223	ENST00000630866	SDF4	Q9BRK5	362 aa		10.22	□□□□□ -0.77
SPTAN1-223	ENST00000630866	CT47B1	P0C2W7	299 aa	Predicted RBP	10.22	□□□□□ -0.77
SPTAN1-223	ENST00000630866	CHMP4BP1	P59074	171 aa		10.22	□□□□□ -0.77
SPTAN1-223	ENST00000630866	DDX46	Q7L014	1031 aa	Known RBP	10.22	□□□□□ -0.77
SPTAN1-223	ENST00000630866	MCM10	Q7L590	875 aa		10.22	□□□□□ -0.77
SPTAN1-223	ENST00000630866	ZHX3	Q9H4I2	956 aa		10.22	□□□□□ -0.77
SPTAN1-223	ENST00000630866	NUCB2	P80303	420 aa		10.22	□□□□□ -0.77
SPTAN1-223	ENST00000630866	CTNNA3	Q9UI47	895 aa		10.22	□□□□□ -0.77
SPTAN1-223	ENST00000630866	SYCP1	Q15431	976 aa		10.22	□□□□□ -0.77
SPTAN1-223	ENST00000630866	TEX35	Q5T0J7	233 aa		10.22	□□□□□ -0.77
SPTAN1-223	ENST00000630866	DUSP27	Q5VZP5	1158 aa		10.22	□□□□□ -0.77
SPTAN1-223	ENST00000630866	CCDC97	Q96F63	343 aa	Predicted RBP	10.22	□□□□□ -0.77
SPTAN1-223	ENST00000630866	MKNK2	Q9HBH9	465 aa		10.21	□□□□□ -0.77
SPTAN1-223	ENST00000630866	C22orf23	Q9BZE7	217 aa		10.21	□□□□□ -0.77
SPTAN1-223	ENST00000630866	MAP4K4	O95819	1239 aa	Predicted RBP	10.21	□□□□□ -0.77
SPTAN1-223	ENST00000630866	PDC	P20941	246 aa		10.21	□□□□□ -0.78
SPTAN1-223	ENST00000630866	GPT	P24298	496 aa		10.21	□□□□□ -0.78
SPTAN1-223	ENST00000630866	ANKRD24	Q8TF21	1146 aa		10.21	□□□□□ -0.78
SPTAN1-223	ENST00000630866	CLEC11A	Q9Y240	323 aa		10.21	□□□□□ -0.78
SPTAN1-223	ENST00000630866	MAP7D2	Q96T17	732 aa		10.21	□□□□□ -0.78
SPTAN1-223	ENST00000630866	PPP1R42	Q7Z4L9	355 aa		10.21	□□□□□ -0.78
SPTAN1-223	ENST00000630866	ACSBG1	Q96GR2	724 aa		10.21	□□□□□ -0.78
SPTAN1-223	ENST00000630866	BEGAIN	Q9BUH8	593 aa		10.21	□□□□□ -0.78
SPTAN1-223	ENST00000630866	TSPOAP1	O95153	1857 aa		10.2	□□□□□ -0.78
SPTAN1-223	ENST00000630866	SLC5A1	P13866	664 aa		10.2	□□□□□ -0.78
SPTAN1-223	ENST00000630866	MATR3	P43243	847 aa	Known RBP eCLIP	10.2	□□□□□ -0.78
SPTAN1-223	ENST00000630866	CDR1	P51861	262 aa		10.2	□□□□□ -0.78
SPTAN1-223	ENST00000630866	MYO1B	O43795	1136 aa		10.2	□□□□□ -0.78
SPTAN1-223	ENST00000630866	DDB1	Q16531	1140 aa		10.2	□□□□□ -0.78
SPTAN1-223	ENST00000630866	ANKRD18B	A2A2Z9	1011 aa		10.2	□□□□□ -0.78
SPTAN1-223	ENST00000630866	CDC5L	Q99459	802 aa	Known RBP	10.2	□□□□□ -0.78
SPTAN1-223	ENST00000630866	NAT10	Q9H0A0	1025 aa	Known RBP	10.2	□□□□□ -0.78
SPTAN1-223	ENST00000630866	PTPN23	Q9H3S7	1636 aa		10.2	□□□□□ -0.78
SPTAN1-223	ENST00000630866	PCF11	O94913	1555 aa	Known RBP	10.2	□□□□□ -0.78
SPTAN1-223	ENST00000630866	TMPO	P42166	694 aa	Known RBP	10.2	□□□□□ -0.78
SPTAN1-223	ENST00000630866	CCDC191	Q8NCU4	936 aa		10.2	□□□□□ -0.78
SPTAN1-223	ENST00000630866	MAGEC2	Q9UBF1	373 aa	Predicted RBP	10.2	□□□□□ -0.78
SPTAN1-223	ENST00000630866	UHRF1BP1L	A0JNW5	1464 aa		10.2	□□□□□ -0.78
SPTAN1-223	ENST00000630866	BCAR3	O75815	825 aa		10.19	□□□□□ -0.78
SPTAN1-223	ENST00000630866	RDX	P35241	583 aa	Known RBP	10.19	□□□□□ -0.78
SPTAN1-223	ENST00000630866	ANKRD1	Q15327	319 aa		10.19	□□□□□ -0.78
SPTAN1-223	ENST00000630866	ATF7IP	Q6VMQ6	1270 aa		10.19	□□□□□ -0.78
SPTAN1-223	ENST00000630866	DHX29	Q7Z478	1369 aa	Known RBP	10.19	□□□□□ -0.78
SPTAN1-223	ENST00000630866	TNIP1	Q15025	636 aa		10.19	□□□□□ -0.78
SPTAN1-223	ENST00000630866	HSP90AB2P	Q58FF8	381 aa		10.19	□□□□□ -0.78
SPTAN1-223	ENST00000630866	NOM1	Q5C9Z4	860 aa	Known RBP	10.19	□□□□□ -0.78
SPTAN1-223	ENST00000630866	HYPK	Q9NX55	129 aa		10.19	□□□□□ -0.78
SPTAN1-223	ENST00000630866	NBPF6	Q5VWK0	638 aa		10.19	□□□□□ -0.78
SPTAN1-223	ENST00000630866	NBPF5P	Q86XG9	351 aa	Predicted RBP	10.19	□□□□□ -0.78
SPTAN1-223	ENST00000630866	CDCA7L	Q96GN5	454 aa		10.19	□□□□□ -0.78
SPTAN1-223	ENST00000630866	NBPF4	Q96M43	638 aa		10.19	□□□□□ -0.78
SPTAN1-223	ENST00000630866	CYP46A1	Q9Y6A2	500 aa		10.19	□□□□□ -0.78
SPTAN1-223	ENST00000630866	ZNF396	Q96N95	335 aa	Predicted RBP	10.19	□□□□□ -0.78
SPTAN1-223	ENST00000630866	NCKAP5L	Q9HCH0	1330 aa		10.19	□□□□□ -0.78
SPTAN1-223	ENST00000630866	NEK4	P51957	841 aa		10.18	□□□□□ -0.78
SPTAN1-223	ENST00000630866	SMARCC1	Q92922	1105 aa	Predicted RBP	10.18	□□□□□ -0.78
SPTAN1-223	ENST00000630866	LRRC59	Q96AG4	307 aa	Known RBP	10.18	□□□□□ -0.78
SPTAN1-223	ENST00000630866	PDCL3	Q9H2J4	239 aa		10.18	□□□□□ -0.78
SPTAN1-223	ENST00000630866	NOL7	Q9UMY1	257 aa	Known RBP	10.18	□□□□□ -0.78
SPTAN1-223	ENST00000630866	ZCRB1	Q8TBF4	217 aa	Known RBP	10.18	□□□□□ -0.78
SPTAN1-223	ENST00000630866	ACE	P12821	1306 aa		10.18	□□□□□ -0.78
SPTAN1-223	ENST00000630866	ADGRF5	Q8IZF2	1346 aa		10.18	□□□□□ -0.78
SPTAN1-223	ENST00000630866	DCTN1	Q14203	1278 aa		10.18	□□□□□ -0.78
SPTAN1-223	ENST00000630866	HOMER1	Q86YM7	354 aa		10.18	□□□□□ -0.78
SPTAN1-223	ENST00000630866	SCLT1	Q96NL6	688 aa		10.18	□□□□□ -0.78
SPTAN1-223	ENST00000630866	NAIP	Q13075	1403 aa		10.18	□□□□□ -0.78
SPTAN1-223	ENST00000630866	MINDY4B	A8MYZ0	360 aa		10.18	□□□□□ -0.78
SPTAN1-223	ENST00000630866	CDKL5	O76039	1030 aa		10.18	□□□□□ -0.78
SPTAN1-223	ENST00000630866	JMY	Q8N9B5	988 aa		10.18	□□□□□ -0.78
SPTAN1-223	ENST00000630866	SEC63	Q9UGP8	760 aa	Known RBP	10.18	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms