RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 PRG4Q92954 1404 aaPredicted RBP13.84□□□□□ -0.19
SHPRH-211ENST00000629427 TRIM21P19474 475 aaKnown RBP13.84□□□□□ -0.19
SHPRH-211ENST00000629427 NBPF1Q3BBV0 1214 aa13.84□□□□□ -0.19
SHPRH-211ENST00000629427 SSR1P43307 286 aaKnown RBP13.84□□□□□ -0.19
SHPRH-211ENST00000629427 KRT85P78386 507 aa13.84□□□□□ -0.19
SHPRH-211ENST00000629427 CEP57L1Q8IYX8 460 aa13.84□□□□□ -0.19
SHPRH-211ENST00000629427 TXLNBQ8N3L3 684 aa13.84□□□□□ -0.19
SHPRH-211ENST00000629427 CTNNA3Q9UI47 895 aa13.84□□□□□ -0.19
SHPRH-211ENST00000629427 METTL24Q5JXM2 366 aa13.83□□□□□ -0.2
SHPRH-211ENST00000629427 ANKIB1Q9P2G1 1089 aa13.83□□□□□ -0.2
SHPRH-211ENST00000629427 JAKMIP1Q96N16 626 aaKnown RBP13.83□□□□□ -0.2
SHPRH-211ENST00000629427 ERBINQ96RT1 1412 aa13.83□□□□□ -0.2
SHPRH-211ENST00000629427 GNAT3A8MTJ3 354 aa13.82□□□□□ -0.2
SHPRH-211ENST00000629427 GBP2P32456 591 aaPredicted RBP13.82□□□□□ -0.2
SHPRH-211ENST00000629427 PTCD1O75127 700 aaKnown RBP13.82□□□□□ -0.2
SHPRH-211ENST00000629427 POLR3DP05423 398 aaPredicted RBP13.82□□□□□ -0.2
SHPRH-211ENST00000629427 AIDAQ96BJ3 306 aa13.82□□□□□ -0.2
SHPRH-211ENST00000629427 PLCD4Q9BRC7 762 aa13.82□□□□□ -0.2
SHPRH-211ENST00000629427 C9orf84Q5VXU9 1444 aa13.82□□□□□ -0.2
SHPRH-211ENST00000629427 WDR33Q9C0J8 1336 aaKnown RBP13.82□□□□□ -0.2
SHPRH-211ENST00000629427 MYCNP04198 464 aaPredicted RBP13.82□□□□□ -0.2
SHPRH-211ENST00000629427 PDRG1Q9NUG6 133 aa13.82□□□□□ -0.2
SHPRH-211ENST00000629427 SEC63Q9UGP8 760 aaKnown RBP13.82□□□□□ -0.2
SHPRH-211ENST00000629427 GRIN2BQ13224 1484 aa13.82□□□□□ -0.2
SHPRH-211ENST00000629427 CRACR2BQ8N4Y2 399 aaPredicted RBP13.82□□□□□ -0.2
SHPRH-211ENST00000629427 TAX1BP1Q86VP1 789 aa13.82□□□□□ -0.2
SHPRH-211ENST00000629427 LEKR1Q6ZMV7 388 aa13.82□□□□□ -0.2
SHPRH-211ENST00000629427 PDE3AQ14432 1141 aa13.81□□□□□ -0.2
SHPRH-211ENST00000629427 TTLL12Q14166 644 aaPredicted RBP13.81□□□□□ -0.2
SHPRH-211ENST00000629427 CAVIN4Q5BKX8 364 aa13.81□□□□□ -0.2
SHPRH-211ENST00000629427 IL1RAPL2Q9NP60 686 aa13.81□□□□□ -0.2
SHPRH-211ENST00000629427 CFAP45Q9UL16 551 aa13.81□□□□□ -0.2
SHPRH-211ENST00000629427 MINDY4BA8MYZ0 360 aa13.81□□□□□ -0.2
SHPRH-211ENST00000629427 IMMTQ16891 758 aaKnown RBP13.81□□□□□ -0.2
SHPRH-211ENST00000629427 CHD1LQ86WJ1 897 aa13.81□□□□□ -0.2
SHPRH-211ENST00000629427 PPM1FP49593 454 aaPredicted RBP13.81□□□□□ -0.2
SHPRH-211ENST00000629427 TNIP1Q15025 636 aa13.81□□□□□ -0.2
SHPRH-211ENST00000629427 ATF7IPQ6VMQ6 1270 aa13.81□□□□□ -0.2
SHPRH-211ENST00000629427 PAXIP1Q6ZW49 1069 aaPredicted RBP13.81□□□□□ -0.2
SHPRH-211ENST00000629427 MKNK2Q9HBH9 465 aa13.81□□□□□ -0.2
SHPRH-211ENST00000629427 ZNF287Q9HBT7 754 aa13.81□□□□□ -0.2
SHPRH-211ENST00000629427 SPATA32Q96LK8 384 aa13.8□□□□□ -0.2
SHPRH-211ENST00000629427 SCLT1Q96NL6 688 aa13.8□□□□□ -0.2
SHPRH-211ENST00000629427 TMOD3Q9NYL9 352 aa13.8□□□□□ -0.2
SHPRH-211ENST00000629427 MIS18AQ9NYP9 233 aa13.8□□□□□ -0.2
SHPRH-211ENST00000629427 POGZQ7Z3K3 1410 aa13.8□□□□□ -0.2
SHPRH-211ENST00000629427 CASKIN1Q8WXD9 1431 aa13.8□□□□□ -0.2
SHPRH-211ENST00000629427 LRRFIP2Q9Y608 721 aaKnown RBP13.8□□□□□ -0.2
SHPRH-211ENST00000629427 CFTRP13569 1480 aa13.8□□□□□ -0.2
SHPRH-211ENST00000629427 CBFA2T2O43439 604 aa13.8□□□□□ -0.2
SHPRH-211ENST00000629427 SLC52A1Q9NWF4 448 aa13.8□□□□□ -0.2
SHPRH-211ENST00000629427 HECW1Q76N89 1606 aa13.8□□□□□ -0.2
SHPRH-211ENST00000629427 K7ELQ4 463 aaPredicted RBP13.8□□□□□ -0.2
SHPRH-211ENST00000629427 ERICH3Q5RHP9 1530 aa13.79□□□□□ -0.2
SHPRH-211ENST00000629427 KIAA1328Q86T90 577 aa13.79□□□□□ -0.2
SHPRH-211ENST00000629427 WDR63Q8IWG1 891 aa13.79□□□□□ -0.2
SHPRH-211ENST00000629427 WASF1Q92558 559 aa13.79□□□□□ -0.2
SHPRH-211ENST00000629427 RAPGEF3O95398 923 aa13.79□□□□□ -0.2
SHPRH-211ENST00000629427 MPNDQ8N594 471 aa13.79□□□□□ -0.2
SHPRH-211ENST00000629427 CEP131Q9UPN4 1083 aa13.79□□□□□ -0.2
SHPRH-211ENST00000629427 ADAMTS2O95450 1211 aa13.79□□□□□ -0.2
SHPRH-211ENST00000629427 WDR78Q5VTH9 848 aa13.79□□□□□ -0.2
SHPRH-211ENST00000629427 WDHD1O75717 1129 aaPredicted RBP13.78□□□□□ -0.2
SHPRH-211ENST00000629427 HMGB2P26583 209 aaKnown RBP13.78□□□□□ -0.2
SHPRH-211ENST00000629427 FAM193AP78312 1265 aa13.78□□□□□ -0.2
SHPRH-211ENST00000629427 CASTP20810 708 aaKnown RBP13.78□□□□□ -0.2
SHPRH-211ENST00000629427 EIF5P55010 431 aaKnown RBP13.78□□□□□ -0.2
SHPRH-211ENST00000629427 KRT32Q14532 448 aa13.78□□□□□ -0.2
SHPRH-211ENST00000629427 DZIP1Q86YF9 867 aaKnown RBP13.78□□□□□ -0.2
SHPRH-211ENST00000629427 MVPQ14764 893 aaKnown RBP13.78□□□□□ -0.2
SHPRH-211ENST00000629427 PLEKHH2Q8IVE3 1493 aa13.78□□□□□ -0.2
SHPRH-211ENST00000629427 POTEJP0CG39 1038 aa13.78□□□□□ -0.2
SHPRH-211ENST00000629427 DDX11Q96FC9 970 aa13.78□□□□□ -0.2
SHPRH-211ENST00000629427 DNAI2Q9GZS0 605 aa13.78□□□□□ -0.2
SHPRH-211ENST00000629427 AKAP2Q9Y2D5 859 aa13.78□□□□□ -0.2
SHPRH-211ENST00000629427 PPP4R3AQ6IN85 833 aa13.77□□□□□ -0.2
SHPRH-211ENST00000629427 DHX8Q14562 1220 aaKnown RBP13.77□□□□□ -0.21
SHPRH-211ENST00000629427 MPRIPQ6WCQ1 1025 aa13.77□□□□□ -0.21
SHPRH-211ENST00000629427 ZNF397Q8NF99 534 aaPredicted RBP13.77□□□□□ -0.21
SHPRH-211ENST00000629427 SPDYE4A6NLX3 237 aa13.77□□□□□ -0.21
SHPRH-211ENST00000629427 DHX37Q8IY37 1157 aaKnown RBP13.77□□□□□ -0.21
SHPRH-211ENST00000629427 HFM1A2PYH4 1435 aa13.77□□□□□ -0.21
SHPRH-211ENST00000629427 NUTM1Q86Y26 1132 aa13.76□□□□□ -0.21
SHPRH-211ENST00000629427 PPP1R12BO60237 982 aaPredicted RBP13.76□□□□□ -0.21
SHPRH-211ENST00000629427 EZRP15311 586 aaKnown RBP13.76□□□□□ -0.21
SHPRH-211ENST00000629427 KCNH5Q8NCM2 988 aa13.76□□□□□ -0.21
SHPRH-211ENST00000629427 RPGRQ92834 1020 aaKnown RBP13.76□□□□□ -0.21
SHPRH-211ENST00000629427 EHBP1L1Q8N3D4 1523 aa13.76□□□□□ -0.21
SHPRH-211ENST00000629427 TMEM87AQ8NBN3 555 aa13.76□□□□□ -0.21
SHPRH-211ENST00000629427 JAKMIP3Q5VZ66 844 aa13.76□□□□□ -0.21
SHPRH-211ENST00000629427 NUDT16Q96DE0 195 aaKnown RBP13.75□□□□□ -0.21
SHPRH-211ENST00000629427 MYD88Q99836 296 aa13.75□□□□□ -0.21
SHPRH-211ENST00000629427 ZNF219Q9P2Y4 722 aaPredicted RBP13.75□□□□□ -0.21
SHPRH-211ENST00000629427 MTERF4Q7Z6M4 381 aaKnown RBP13.75□□□□□ -0.21
SHPRH-211ENST00000629427 IQCEQ6IPM2 695 aa13.75□□□□□ -0.21
SHPRH-211ENST00000629427 U3KPZ7 1027 aaPredicted RBP13.75□□□□□ -0.21
SHPRH-211ENST00000629427 KIAA0754O94854 1291 aa13.75□□□□□ -0.21
SHPRH-211ENST00000629427 IFIT1P09914 478 aaKnown RBP13.75□□□□□ -0.21
SHPRH-211ENST00000629427 CCDC96Q2M329 555 aa13.75□□□□□ -0.21
SHPRH-211ENST00000629427 AKNAQ7Z591 1439 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms