RNA–Protein interactions for RNA: ENST00000629380.2

SYNGAP1-208, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYNGAP1, Length 9,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-208ENST00000629380 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.47■□□□□ 0.07
SYNGAP1-208ENST00000629380 SLC4A3P48751 1232 aa15.46■□□□□ 0.07
SYNGAP1-208ENST00000629380 KRT85P78386 507 aa15.46■□□□□ 0.07
SYNGAP1-208ENST00000629380 MPHOSPH10O00566 681 aaKnown RBP15.46■□□□□ 0.07
SYNGAP1-208ENST00000629380 SPG7Q9UQ90 795 aa15.45■□□□□ 0.06
SYNGAP1-208ENST00000629380 ATP2B2Q01814 1243 aa15.45■□□□□ 0.06
SYNGAP1-208ENST00000629380 CFAP57Q96MR6 1250 aa15.45■□□□□ 0.06
SYNGAP1-208ENST00000629380 LNPKQ9C0E8 428 aa15.45■□□□□ 0.06
SYNGAP1-208ENST00000629380 SRCIN1Q9C0H9 1055 aa15.45■□□□□ 0.06
SYNGAP1-208ENST00000629380 MTMR7Q9Y216 660 aa15.45■□□□□ 0.06
SYNGAP1-208ENST00000629380 GCOM1H8Y6P7 765 aaPredicted RBP15.45■□□□□ 0.06
SYNGAP1-208ENST00000629380 MYZAPP0CAP1 466 aa15.45■□□□□ 0.06
SYNGAP1-208ENST00000629380 LRPPRCP42704 1394 aaKnown RBP15.45■□□□□ 0.06
SYNGAP1-208ENST00000629380 PLB1Q6P1J6 1458 aa15.45■□□□□ 0.06
SYNGAP1-208ENST00000629380 FIBPO43427 364 aa15.45■□□□□ 0.06
SYNGAP1-208ENST00000629380 ADGRL1O94910 1474 aa15.45■□□□□ 0.06
SYNGAP1-208ENST00000629380 FAM193AP78312 1265 aa15.45■□□□□ 0.06
SYNGAP1-208ENST00000629380 DNAJC2Q99543 621 aaKnown RBP15.44■□□□□ 0.06
SYNGAP1-208ENST00000629380 ZNF287Q9HBT7 754 aa15.44■□□□□ 0.06
SYNGAP1-208ENST00000629380 SMTNL1A8MU46 457 aa15.44■□□□□ 0.06
SYNGAP1-208ENST00000629380 FGFR1OPO95684 399 aaKnown RBP15.44■□□□□ 0.06
SYNGAP1-208ENST00000629380 PDCL2Q8N4E4 241 aa15.44■□□□□ 0.06
SYNGAP1-208ENST00000629380 BICRAQ9NZM4 1560 aa15.44■□□□□ 0.06
SYNGAP1-208ENST00000629380 HOOK3Q86VS8 718 aa15.44■□□□□ 0.06
SYNGAP1-208ENST00000629380 CRACR2AQ9BSW2 395 aa15.44■□□□□ 0.06
SYNGAP1-208ENST00000629380 SEC63Q9UGP8 760 aaKnown RBP15.44■□□□□ 0.06
SYNGAP1-208ENST00000629380 ARHGAP29Q52LW3 1261 aa15.43■□□□□ 0.06
SYNGAP1-208ENST00000629380 UNC13AQ9UPW8 1703 aa15.43■□□□□ 0.06
SYNGAP1-208ENST00000629380 MAP2K1Q02750 393 aaPredicted RBP15.43■□□□□ 0.06
SYNGAP1-208ENST00000629380 ZNF644Q9H582 1327 aaPredicted RBP15.43■□□□□ 0.06
SYNGAP1-208ENST00000629380 SPC24Q8NBT2 197 aa15.43■□□□□ 0.06
SYNGAP1-208ENST00000629380 RNF214Q8ND24 703 aa15.43■□□□□ 0.06
SYNGAP1-208ENST00000629380 PRKRIP1Q9H875 184 aaPredicted RBP15.43■□□□□ 0.06
SYNGAP1-208ENST00000629380 MICALCLQ6ZW33 695 aa15.43■□□□□ 0.06
SYNGAP1-208ENST00000629380 PNISRQ8TF01 805 aaKnown RBP15.43■□□□□ 0.06
SYNGAP1-208ENST00000629380 ZHX3Q9H4I2 956 aa15.43■□□□□ 0.06
SYNGAP1-208ENST00000629380 CCDC102AQ96A19 550 aa15.43■□□□□ 0.06
SYNGAP1-208ENST00000629380 CNNM1Q9NRU3 951 aa15.43■□□□□ 0.06
SYNGAP1-208ENST00000629380 STRN4Q9NRL3 753 aa15.43■□□□□ 0.06
SYNGAP1-208ENST00000629380 GNAI2P04899 355 aa15.42■□□□□ 0.06
SYNGAP1-208ENST00000629380 SSR1P43307 286 aaKnown RBP15.42■□□□□ 0.06
SYNGAP1-208ENST00000629380 APAF1O14727 1248 aa15.42■□□□□ 0.06
SYNGAP1-208ENST00000629380 SMC1AQ14683 1233 aaKnown RBP15.42■□□□□ 0.06
SYNGAP1-208ENST00000629380 CCT4P50991 539 aaKnown RBP15.42■□□□□ 0.06
SYNGAP1-208ENST00000629380 SPA17Q15506 151 aa15.42■□□□□ 0.06
SYNGAP1-208ENST00000629380 TOM1L2Q6ZVM7 507 aa15.42■□□□□ 0.06
SYNGAP1-208ENST00000629380 SREK1Q8WXA9 508 aaKnown RBP15.42■□□□□ 0.06
SYNGAP1-208ENST00000629380 TRAK2O60296 914 aa15.42■□□□□ 0.06
SYNGAP1-208ENST00000629380 IL27Q8NEV9 243 aa15.42■□□□□ 0.06
SYNGAP1-208ENST00000629380 TAOK3Q9H2K8 898 aa15.42■□□□□ 0.06
SYNGAP1-208ENST00000629380 PIP4K2BP78356 416 aa15.42■□□□□ 0.06
SYNGAP1-208ENST00000629380 TMCO3Q6UWJ1 677 aa15.42■□□□□ 0.06
SYNGAP1-208ENST00000629380 PHAXQ9H814 394 aaKnown RBP15.42■□□□□ 0.06
SYNGAP1-208ENST00000629380 RTEL1-TNFRSF6BF6WH68 1400 aa15.42■□□□□ 0.06
SYNGAP1-208ENST00000629380 AIMP1Q12904 312 aaKnown RBP15.41■□□□□ 0.06
SYNGAP1-208ENST00000629380 LUZP1Q86V48 1076 aa15.41■□□□□ 0.06
SYNGAP1-208ENST00000629380 CTNNA3Q9UI47 895 aa15.41■□□□□ 0.06
SYNGAP1-208ENST00000629380 PLEKHH1Q9ULM0 1364 aa15.41■□□□□ 0.06
SYNGAP1-208ENST00000629380 NEK4P51957 841 aa15.41■□□□□ 0.06
SYNGAP1-208ENST00000629380 KRT32Q14532 448 aa15.41■□□□□ 0.06
SYNGAP1-208ENST00000629380 UBAC1Q9BSL1 405 aa15.41■□□□□ 0.06
SYNGAP1-208ENST00000629380 ATP2B1P20020 1258 aa15.41■□□□□ 0.06
SYNGAP1-208ENST00000629380 DDX12PQ92771 950 aa15.41■□□□□ 0.06
SYNGAP1-208ENST00000629380 ATAD2Q6PL18 1390 aa15.41■□□□□ 0.06
SYNGAP1-208ENST00000629380 POLR3GO15318 223 aaPredicted RBP15.41■□□□□ 0.06
SYNGAP1-208ENST00000629380 PRDM11Q9NQV5 511 aa15.4■□□□□ 0.06
SYNGAP1-208ENST00000629380 NUTM2BA6NNL0 878 aaPredicted RBP15.4■□□□□ 0.06
SYNGAP1-208ENST00000629380 NUTM2EB1AL46 878 aaPredicted RBP15.4■□□□□ 0.06
SYNGAP1-208ENST00000629380 ZNF76P36508 570 aa15.4■□□□□ 0.06
SYNGAP1-208ENST00000629380 NUTM2AQ8IVF1 878 aaPredicted RBP15.4■□□□□ 0.06
SYNGAP1-208ENST00000629380 EIF5P55010 431 aaKnown RBP15.4■□□□□ 0.06
SYNGAP1-208ENST00000629380 GCC1Q96CN9 775 aa15.4■□□□□ 0.06
SYNGAP1-208ENST00000629380 FERMT1Q9BQL6 677 aa15.4■□□□□ 0.06
SYNGAP1-208ENST00000629380 NFKBIBQ15653 356 aa15.4■□□□□ 0.06
SYNGAP1-208ENST00000629380 BBXQ8WY36 941 aaPredicted RBP15.39■□□□□ 0.05
SYNGAP1-208ENST00000629380 DDX23Q9BUQ8 820 aaKnown RBP15.39■□□□□ 0.05
SYNGAP1-208ENST00000629380 TIAM1Q13009 1591 aa15.39■□□□□ 0.05
SYNGAP1-208ENST00000629380 ERBINQ96RT1 1412 aa15.39■□□□□ 0.05
SYNGAP1-208ENST00000629380 BCL11BQ9C0K0 894 aaPredicted RBP15.39■□□□□ 0.05
SYNGAP1-208ENST00000629380 TSG101Q99816 390 aa15.39■□□□□ 0.05
SYNGAP1-208ENST00000629380 CABP2Q9NPB3 220 aa15.39■□□□□ 0.05
SYNGAP1-208ENST00000629380 MPHOSPH8Q99549 860 aa15.39■□□□□ 0.05
SYNGAP1-208ENST00000629380 DENND4BO75064 1496 aaPredicted RBP15.39■□□□□ 0.05
SYNGAP1-208ENST00000629380 RAPGEF3O95398 923 aa15.39■□□□□ 0.05
SYNGAP1-208ENST00000629380 KCNH5Q8NCM2 988 aa15.39■□□□□ 0.05
SYNGAP1-208ENST00000629380 PRAM1Q96QH2 718 aa15.39■□□□□ 0.05
SYNGAP1-208ENST00000629380 PABPN1LA6NDY0 278 aaKnown RBP15.38■□□□□ 0.05
SYNGAP1-208ENST00000629380 POTEB2H3BUK9 544 aa15.38■□□□□ 0.05
SYNGAP1-208ENST00000629380 ZSCAN12O43309 604 aa15.38■□□□□ 0.05
SYNGAP1-208ENST00000629380 WDHD1O75717 1129 aaPredicted RBP15.38■□□□□ 0.05
SYNGAP1-208ENST00000629380 FAM135AQ9P2D6 1515 aa15.38■□□□□ 0.05
SYNGAP1-208ENST00000629380 KIAA1107Q9UPP5 1409 aa15.38■□□□□ 0.05
SYNGAP1-208ENST00000629380 RRP9O43818 475 aaKnown RBP15.38■□□□□ 0.05
SYNGAP1-208ENST00000629380 UQCRHLA0A096LP55 91 aa15.38■□□□□ 0.05
SYNGAP1-208ENST00000629380 UQCRHP07919 91 aa15.38■□□□□ 0.05
SYNGAP1-208ENST00000629380 FERP16591 822 aa15.38■□□□□ 0.05
SYNGAP1-208ENST00000629380 SPATA32Q96LK8 384 aa15.38■□□□□ 0.05
SYNGAP1-208ENST00000629380 HOMER2Q9NSB8 354 aa15.37■□□□□ 0.05
SYNGAP1-208ENST00000629380 CEBPZQ03701 1054 aaKnown RBP15.37■□□□□ 0.05
SYNGAP1-208ENST00000629380 IFFO1Q0D2I5 559 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms