RNA–Protein interactions for RNA: ENST00000629350.2

CDK7-215, Transcript of cyclin dependent kinase 7, humanhuman

TSL 5 BASIC

Gene CDK7, Length 1,149 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-215ENST00000629350 CARD10Q9BWT7 1032 aa20.04■□□□□ 0.8
CDK7-215ENST00000629350 LRP5O75197 1615 aa20.04■□□□□ 0.8
CDK7-215ENST00000629350 CSB-PGBD3P0DP91 1061 aa20.03■□□□□ 0.8
CDK7-215ENST00000629350 CAMKK2Q96RR4 588 aa20.03■□□□□ 0.8
CDK7-215ENST00000629350 NHSQ6T4R5 1651 aa20.03■□□□□ 0.8
CDK7-215ENST00000629350 MAP3K19Q56UN5 1328 aa20.02■□□□□ 0.8
CDK7-215ENST00000629350 ANKRD26Q9UPS8 1709 aa20.02■□□□□ 0.8
CDK7-215ENST00000629350 CCER1Q8TC90 406 aaPredicted RBP20.02■□□□□ 0.8
CDK7-215ENST00000629350 CARD14Q9BXL6 1004 aa20.02■□□□□ 0.8
CDK7-215ENST00000629350 ANKRD24Q8TF21 1146 aa20.01■□□□□ 0.79
CDK7-215ENST00000629350 GGNBP2Q9H3C7 697 aa20.01■□□□□ 0.79
CDK7-215ENST00000629350 TIMELESSQ9UNS1 1208 aa20.01■□□□□ 0.79
CDK7-215ENST00000629350 NSD3Q9BZ95 1437 aa20.01■□□□□ 0.79
CDK7-215ENST00000629350 DDB1Q16531 1140 aa20■□□□□ 0.79
CDK7-215ENST00000629350 CCDC7Q96M83 1385 aa19.99■□□□□ 0.79
CDK7-215ENST00000629350 FYB1O15117 783 aa19.99■□□□□ 0.79
CDK7-215ENST00000629350 APBA3O96018 575 aa19.99■□□□□ 0.79
CDK7-215ENST00000629350 BTAF1O14981 1849 aa19.97■□□□□ 0.79
CDK7-215ENST00000629350 MNX1P50219 401 aaPredicted RBP19.97■□□□□ 0.79
CDK7-215ENST00000629350 RRS1Q15050 365 aaKnown RBP19.97■□□□□ 0.79
CDK7-215ENST00000629350 LTV1Q96GA3 475 aaPredicted RBP19.97■□□□□ 0.79
CDK7-215ENST00000629350 NLRP2Q9NX02 1062 aa19.97■□□□□ 0.79
CDK7-215ENST00000629350 MEGF6O75095 1541 aa19.97■□□□□ 0.79
CDK7-215ENST00000629350 DOT1LQ8TEK3 1739 aa19.96■□□□□ 0.79
CDK7-215ENST00000629350 HSPA5P11021 654 aaKnown RBP19.96■□□□□ 0.79
CDK7-215ENST00000629350 IP6K1Q92551 441 aa19.96■□□□□ 0.79
CDK7-215ENST00000629350 COG3Q96JB2 828 aa19.96■□□□□ 0.79
CDK7-215ENST00000629350 BCL9O00512 1426 aa19.95■□□□□ 0.78
CDK7-215ENST00000629350 HOXC9P31274 260 aa19.95■□□□□ 0.78
CDK7-215ENST00000629350 R3HDM1Q15032 1099 aaKnown RBP19.95■□□□□ 0.78
CDK7-215ENST00000629350 MAP2P11137 1827 aaKnown RBP19.93■□□□□ 0.78
CDK7-215ENST00000629350 C11orf95C9JLR9 678 aaPredicted RBP19.92■□□□□ 0.78
CDK7-215ENST00000629350 CASZ1Q86V15 1759 aa19.92■□□□□ 0.78
CDK7-215ENST00000629350 RTL1A6NKG5 1358 aa19.92■□□□□ 0.78
CDK7-215ENST00000629350 PARD3Q8TEW0 1356 aa19.92■□□□□ 0.78
CDK7-215ENST00000629350 KCNQ2O43526 872 aa19.91■□□□□ 0.78
CDK7-215ENST00000629350 PAPPAQ13219 1627 aa19.91■□□□□ 0.78
CDK7-215ENST00000629350 CDCA7Q9BWT1 371 aaPredicted RBP19.9■□□□□ 0.78
CDK7-215ENST00000629350 ANO8Q9HCE9 1232 aaPredicted RBP19.9■□□□□ 0.78
CDK7-215ENST00000629350 SLC24A1O60721 1099 aa19.89■□□□□ 0.77
CDK7-215ENST00000629350 IL2RBP14784 551 aa19.89■□□□□ 0.77
CDK7-215ENST00000629350 USHBP1Q8N6Y0 703 aa19.89■□□□□ 0.77
CDK7-215ENST00000629350 KAT6BQ8WYB5 2073 aa19.89■□□□□ 0.77
CDK7-215ENST00000629350 POLR3GLQ9BT43 218 aa19.89■□□□□ 0.77
CDK7-215ENST00000629350 ZBTB47Q9UFB7 747 aaPredicted RBP19.89■□□□□ 0.77
CDK7-215ENST00000629350 TOGARAM1Q9Y4F4 1720 aa19.88■□□□□ 0.77
CDK7-215ENST00000629350 EMILIN1Q9Y6C2 1016 aa19.88■□□□□ 0.77
CDK7-215ENST00000629350 EXOC5O00471 708 aa19.87■□□□□ 0.77
CDK7-215ENST00000629350 AMPHP49418 695 aa19.87■□□□□ 0.77
CDK7-215ENST00000629350 CDCA8Q53HL2 280 aa19.87■□□□□ 0.77
CDK7-215ENST00000629350 SPOCK2Q92563 424 aa19.87■□□□□ 0.77
CDK7-215ENST00000629350 ACSBG1Q96GR2 724 aa19.87■□□□□ 0.77
CDK7-215ENST00000629350 BCL11BQ9C0K0 894 aaPredicted RBP19.87■□□□□ 0.77
CDK7-215ENST00000629350 FARP1Q9Y4F1 1045 aaPredicted RBP19.87■□□□□ 0.77
CDK7-215ENST00000629350 PKD1L3Q7Z443 1732 aa19.86■□□□□ 0.77
CDK7-215ENST00000629350 HSP90AB2PQ58FF8 381 aa19.86■□□□□ 0.77
CDK7-215ENST00000629350 NBPF6Q5VWK0 638 aa19.86■□□□□ 0.77
CDK7-215ENST00000629350 NBPF4Q96M43 638 aa19.86■□□□□ 0.77
CDK7-215ENST00000629350 EIF4G2P78344 907 aaKnown RBP eCLIP19.85■□□□□ 0.77
CDK7-215ENST00000629350 TUBGCP6Q96RT7 1819 aa19.85■□□□□ 0.77
CDK7-215ENST00000629350 INSRP06213 1382 aa19.83■□□□□ 0.77
CDK7-215ENST00000629350 FLT4P35916 1363 aa19.83■□□□□ 0.77
CDK7-215ENST00000629350 PDGFDQ9GZP0 370 aaPredicted RBP19.83■□□□□ 0.77
CDK7-215ENST00000629350 NSD2O96028 1365 aa19.83■□□□□ 0.76
CDK7-215ENST00000629350 NCAPD2Q15021 1401 aa19.82■□□□□ 0.76
CDK7-215ENST00000629350 LY75O60449 1722 aa19.82■□□□□ 0.76
CDK7-215ENST00000629350 PLSCR1O15162 318 aa19.8■□□□□ 0.76
CDK7-215ENST00000629350 DDX54Q8TDD1 881 aaKnown RBP19.79■□□□□ 0.76
CDK7-215ENST00000629350 ITGB4P16144 1822 aa19.79■□□□□ 0.76
CDK7-215ENST00000629350 PANK3Q9H999 370 aa19.78■□□□□ 0.76
CDK7-215ENST00000629350 CGNL1Q0VF96 1302 aa19.77■□□□□ 0.76
CDK7-215ENST00000629350 SMG6Q86US8 1419 aaKnown RBP19.77■□□□□ 0.76
CDK7-215ENST00000629350 TXNRD1Q16881 649 aa19.77■□□□□ 0.76
CDK7-215ENST00000629350 KIF24Q5T7B8 1368 aa19.77■□□□□ 0.76
CDK7-215ENST00000629350 TNNT2P45379 298 aaPredicted RBP19.76■□□□□ 0.75
CDK7-215ENST00000629350 KIF7Q2M1P5 1343 aa19.76■□□□□ 0.75
CDK7-215ENST00000629350 NUBP1P53384 320 aa19.75■□□□□ 0.75
CDK7-215ENST00000629350 RTN4Q9NQC3 1192 aaKnown RBP19.75■□□□□ 0.75
CDK7-215ENST00000629350 POLKQ9UBT6 870 aa19.75■□□□□ 0.75
CDK7-215ENST00000629350 PPM1GO15355 546 aaPredicted RBP19.74■□□□□ 0.75
CDK7-215ENST00000629350 LRRC4BQ9NT99 713 aa19.74■□□□□ 0.75
CDK7-215ENST00000629350 ZCRB1Q8TBF4 217 aaKnown RBP19.73■□□□□ 0.75
CDK7-215ENST00000629350 QSER1Q2KHR3 1735 aa19.73■□□□□ 0.75
CDK7-215ENST00000629350 KCNQ4P56696 695 aa19.72■□□□□ 0.75
CDK7-215ENST00000629350 ZNF827Q17R98 1081 aa19.71■□□□□ 0.75
CDK7-215ENST00000629350 WASHC2AQ641Q2 1341 aa19.71■□□□□ 0.75
CDK7-215ENST00000629350 TAF1LQ8IZX4 1826 aa19.7■□□□□ 0.74
CDK7-215ENST00000629350 PRIM1P49642 420 aaKnown RBP19.7■□□□□ 0.74
CDK7-215ENST00000629350 NBPF14Q5TI25 921 aa19.7■□□□□ 0.74
CDK7-215ENST00000629350 C5P01031 1676 aa19.69■□□□□ 0.74
CDK7-215ENST00000629350 CYP27B1O15528 508 aa19.69■□□□□ 0.74
CDK7-215ENST00000629350 EYA1Q99502 592 aa19.69■□□□□ 0.74
CDK7-215ENST00000629350 EIF4A2Q14240 407 aaKnown RBP19.68■□□□□ 0.74
CDK7-215ENST00000629350 AMER1Q5JTC6 1135 aaPredicted RBP19.67■□□□□ 0.74
CDK7-215ENST00000629350 RASEFQ8IZ41 740 aa19.67■□□□□ 0.74
CDK7-215ENST00000629350 RAPGEF4Q8WZA2 1011 aa19.67■□□□□ 0.74
CDK7-215ENST00000629350 SYTL4Q96C24 671 aaPredicted RBP19.67■□□□□ 0.74
CDK7-215ENST00000629350 COL24A1Q17RW2 1714 aa19.66■□□□□ 0.74
CDK7-215ENST00000629350 ZBTB7AO95365 584 aa19.66■□□□□ 0.74
CDK7-215ENST00000629350 TATP17735 454 aaPredicted RBP19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms