RNA–Protein interactions for RNA: ENST00000628904.2

PKP4-217, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 3,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-217ENST00000628904 GCP02774 474 aa9.28□□□□□ -0.92
PKP4-217ENST00000628904 NUTM2AQ8IVF1 878 aaPredicted RBP9.28□□□□□ -0.92
PKP4-217ENST00000628904 ANKRD24Q8TF21 1146 aa9.28□□□□□ -0.92
PKP4-217ENST00000628904 TBC1D2Q9BYX2 928 aa9.28□□□□□ -0.92
PKP4-217ENST00000628904 BRPF3Q9ULD4 1205 aa9.28□□□□□ -0.92
PKP4-217ENST00000628904 ZBTB7BO15156 539 aaPredicted RBP9.28□□□□□ -0.92
PKP4-217ENST00000628904 TTC5Q8N0Z6 440 aa9.28□□□□□ -0.92
PKP4-217ENST00000628904 DIP2CQ9Y2E4 1556 aa9.27□□□□□ -0.92
PKP4-217ENST00000628904 ATP5J2-PTCD1G3V325 749 aa9.27□□□□□ -0.93
PKP4-217ENST00000628904 TBX22Q9Y458 520 aa9.27□□□□□ -0.93
PKP4-217ENST00000628904 MROH2AA6NES4 1674 aa9.27□□□□□ -0.93
PKP4-217ENST00000628904 GLI2P10070 1586 aa9.27□□□□□ -0.93
PKP4-217ENST00000628904 IL17REQ8NFR9 667 aa9.27□□□□□ -0.93
PKP4-217ENST00000628904 PIP4K2BP78356 416 aa9.27□□□□□ -0.93
PKP4-217ENST00000628904 CWF19L2Q2TBE0 894 aaKnown RBP9.27□□□□□ -0.93
PKP4-217ENST00000628904 UPF3BQ9BZI7 483 aaKnown RBP9.27□□□□□ -0.93
PKP4-217ENST00000628904 ADGRB3O60242 1522 aa9.27□□□□□ -0.93
PKP4-217ENST00000628904 GNAI2P04899 355 aa9.26□□□□□ -0.93
PKP4-217ENST00000628904 PLCB2Q00722 1185 aa9.26□□□□□ -0.93
PKP4-217ENST00000628904 PLEKHO1Q53GL0 409 aaPredicted RBP9.26□□□□□ -0.93
PKP4-217ENST00000628904 NFATC2IPQ8NCF5 419 aa9.26□□□□□ -0.93
PKP4-217ENST00000628904 PPFIA3O75145 1194 aa9.26□□□□□ -0.93
PKP4-217ENST00000628904 ADAMTS2O95450 1211 aa9.26□□□□□ -0.93
PKP4-217ENST00000628904 ALDH1L2Q3SY69 923 aa9.26□□□□□ -0.93
PKP4-217ENST00000628904 TBC1D9Q6ZT07 1266 aa9.26□□□□□ -0.93
PKP4-217ENST00000628904 PA2G4Q9UQ80 394 aaKnown RBP9.26□□□□□ -0.93
PKP4-217ENST00000628904 RIMBP3CA6NJZ7 1639 aa9.26□□□□□ -0.93
PKP4-217ENST00000628904 RIMBP3BA6NNM3 1639 aa9.26□□□□□ -0.93
PKP4-217ENST00000628904 RIMBP3Q9UFD9 1639 aa9.26□□□□□ -0.93
PKP4-217ENST00000628904 KLHDC4Q8TBB5 520 aa9.25□□□□□ -0.93
PKP4-217ENST00000628904 MROH1Q8NDA8 1641 aa9.25□□□□□ -0.93
PKP4-217ENST00000628904 ARAP3Q8WWN8 1544 aa9.25□□□□□ -0.93
PKP4-217ENST00000628904 FOSBP53539 338 aa9.24□□□□□ -0.93
PKP4-217ENST00000628904 GSE1Q14687 1217 aa9.24□□□□□ -0.93
PKP4-217ENST00000628904 SRCIN1Q9C0H9 1055 aa9.24□□□□□ -0.93
PKP4-217ENST00000628904 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.24□□□□□ -0.93
PKP4-217ENST00000628904 EDC4Q6P2E9 1401 aaKnown RBP9.24□□□□□ -0.93
PKP4-217ENST00000628904 ALKQ9UM73 1620 aa9.24□□□□□ -0.93
PKP4-217ENST00000628904 PNMA6EA0A0J9YXQ4 647 aa9.24□□□□□ -0.93
PKP4-217ENST00000628904 KDM4AO75164 1064 aa9.24□□□□□ -0.93
PKP4-217ENST00000628904 FGD1P98174 961 aa9.24□□□□□ -0.93
PKP4-217ENST00000628904 SIRT2Q8IXJ6 389 aa9.24□□□□□ -0.93
PKP4-217ENST00000628904 PUS7Q96PZ0 661 aaKnown RBP9.24□□□□□ -0.93
PKP4-217ENST00000628904 NINLQ9Y2I6 1382 aa9.24□□□□□ -0.93
PKP4-217ENST00000628904 CT47B1P0C2W7 299 aaPredicted RBP9.24□□□□□ -0.93
PKP4-217ENST00000628904 NEK4P51957 841 aa9.24□□□□□ -0.93
PKP4-217ENST00000628904 NEUROD6Q96NK8 337 aa9.24□□□□□ -0.93
PKP4-217ENST00000628904 NUCB1Q02818 461 aa9.23□□□□□ -0.93
PKP4-217ENST00000628904 CCDC8Q9H0W5 538 aaPredicted RBP9.23□□□□□ -0.93
PKP4-217ENST00000628904 AXIN2Q9Y2T1 843 aa9.23□□□□□ -0.93
PKP4-217ENST00000628904 PLEKHG3A1L390 1219 aa9.23□□□□□ -0.93
PKP4-217ENST00000628904 CHL1O00533 1208 aa9.23□□□□□ -0.93
PKP4-217ENST00000628904 CWC27Q6UX04 472 aaKnown RBP9.23□□□□□ -0.93
PKP4-217ENST00000628904 KIAA1211Q6ZU35 1233 aa9.23□□□□□ -0.93
PKP4-217ENST00000628904 CHAMP1Q96JM3 812 aa9.23□□□□□ -0.93
PKP4-217ENST00000628904 NDUFB9Q9Y6M9 179 aa9.23□□□□□ -0.93
PKP4-217ENST00000628904 ADGRB1O14514 1584 aa9.23□□□□□ -0.93
PKP4-217ENST00000628904 NEXMIFQ5QGS0 1516 aa9.23□□□□□ -0.93
PKP4-217ENST00000628904 PTPRMP28827 1452 aa9.23□□□□□ -0.93
PKP4-217ENST00000628904 MSH6P52701 1360 aa9.23□□□□□ -0.93
PKP4-217ENST00000628904 CDC45O75419 566 aa9.23□□□□□ -0.93
PKP4-217ENST00000628904 NBPF7P0C2Y1 421 aaPredicted RBP9.23□□□□□ -0.93
PKP4-217ENST00000628904 GCC1Q96CN9 775 aa9.23□□□□□ -0.93
PKP4-217ENST00000628904 MAP3K2Q9Y2U5 619 aa9.23□□□□□ -0.93
PKP4-217ENST00000628904 TATP17735 454 aaPredicted RBP9.22□□□□□ -0.93
PKP4-217ENST00000628904 CABP4P57796 275 aa9.22□□□□□ -0.93
PKP4-217ENST00000628904 PPP1R42Q7Z4L9 355 aa9.22□□□□□ -0.93
PKP4-217ENST00000628904 FLT4P35916 1363 aa9.22□□□□□ -0.93
PKP4-217ENST00000628904 LRRCC1Q9C099 1032 aa9.22□□□□□ -0.93
PKP4-217ENST00000628904 ZBTB3Q9H5J0 574 aa9.22□□□□□ -0.93
PKP4-217ENST00000628904 QRICH2Q9H0J4 1663 aa9.22□□□□□ -0.93
PKP4-217ENST00000628904 USP19O94966 1318 aa9.22□□□□□ -0.93
PKP4-217ENST00000628904 IFIT2P09913 472 aaKnown RBP9.22□□□□□ -0.93
PKP4-217ENST00000628904 PROSER3Q2NL68 480 aa9.22□□□□□ -0.93
PKP4-217ENST00000628904 CEP85Q6P2H3 762 aa9.22□□□□□ -0.93
PKP4-217ENST00000628904 NPHP1O15259 732 aa9.21□□□□□ -0.93
PKP4-217ENST00000628904 SDSP20132 328 aa9.21□□□□□ -0.93
PKP4-217ENST00000628904 SPG7Q9UQ90 795 aa9.21□□□□□ -0.93
PKP4-217ENST00000628904 PIK3C2BO00750 1634 aa9.21□□□□□ -0.93
PKP4-217ENST00000628904 CAMSAP1Q5T5Y3 1602 aa9.21□□□□□ -0.93
PKP4-217ENST00000628904 IL16Q14005 1332 aa9.21□□□□□ -0.94
PKP4-217ENST00000628904 MPNDQ8N594 471 aa9.21□□□□□ -0.94
PKP4-217ENST00000628904 TBC1D32Q96NH3 1257 aa9.21□□□□□ -0.94
PKP4-217ENST00000628904 DNAJC2Q99543 621 aaKnown RBP9.21□□□□□ -0.94
PKP4-217ENST00000628904 MYD88Q99836 296 aa9.21□□□□□ -0.94
PKP4-217ENST00000628904 ARHGAP31Q2M1Z3 1444 aa9.21□□□□□ -0.94
PKP4-217ENST00000628904 NEXNQ0ZGT2 675 aa9.21□□□□□ -0.94
PKP4-217ENST00000628904 HDAC1Q13547 482 aaPredicted RBP9.21□□□□□ -0.94
PKP4-217ENST00000628904 SMC5Q8IY18 1101 aa9.21□□□□□ -0.94
PKP4-217ENST00000628904 STK11IPQ8N1F8 1099 aa9.21□□□□□ -0.94
PKP4-217ENST00000628904 CPS1P31327 1500 aa9.2□□□□□ -0.94
PKP4-217ENST00000628904 GNAI3P08754 354 aa9.2□□□□□ -0.94
PKP4-217ENST00000628904 TCEANC2Q96MN5 208 aa9.2□□□□□ -0.94
PKP4-217ENST00000628904 CCT4P50991 539 aaKnown RBP9.2□□□□□ -0.94
PKP4-217ENST00000628904 TAF7LQ5H9L4 462 aa9.2□□□□□ -0.94
PKP4-217ENST00000628904 GORABQ5T7V8 394 aa9.2□□□□□ -0.94
PKP4-217ENST00000628904 CLTCQ00610 1675 aaKnown RBP9.2□□□□□ -0.94
PKP4-217ENST00000628904 INTS3Q68E01 1043 aaKnown RBP9.2□□□□□ -0.94
PKP4-217ENST00000628904 MCTP1Q6DN14 999 aa9.2□□□□□ -0.94
PKP4-217ENST00000628904 KCNH5Q8NCM2 988 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms