RNA–Protein interactions for RNA: ENST00000627738.1

SOX2-OT-244, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 692 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-244ENST00000627738 CDK12Q9NYV4 1490 aaPredicted RBP13.16□□□□□ -0.3
SOX2-OT-244ENST00000627738 USP54Q70EL1 1684 aa13.16□□□□□ -0.3
SOX2-OT-244ENST00000627738 U2SURPO15042 1029 aaKnown RBP13.16□□□□□ -0.3
SOX2-OT-244ENST00000627738 U2AF1L5P0DN76 240 aaPredicted RBP13.16□□□□□ -0.3
SOX2-OT-244ENST00000627738 U2AF1Q01081 240 aaKnown RBP eCLIP13.16□□□□□ -0.3
SOX2-OT-244ENST00000627738 MARF1Q9Y4F3 1742 aaKnown RBP13.16□□□□□ -0.3
SOX2-OT-244ENST00000627738 TRPM3Q9HCF6 1732 aaPredicted RBP13.14□□□□□ -0.31
SOX2-OT-244ENST00000627738 DDX17Q92841 729 aaKnown RBP13.14□□□□□ -0.31
SOX2-OT-244ENST00000627738 RUNDC1Q96C34 613 aa13.14□□□□□ -0.31
SOX2-OT-244ENST00000627738 APAF1O14727 1248 aa13.13□□□□□ -0.31
SOX2-OT-244ENST00000627738 GTPBP6O43824 516 aaPredicted RBP13.13□□□□□ -0.31
SOX2-OT-244ENST00000627738 IL13P35225 146 aa13.13□□□□□ -0.31
SOX2-OT-244ENST00000627738 BRINP3Q76B58 766 aa13.13□□□□□ -0.31
SOX2-OT-244ENST00000627738 SLAIN1Q8ND83 568 aa13.13□□□□□ -0.31
SOX2-OT-244ENST00000627738 SLAIN2Q9P270 581 aa13.13□□□□□ -0.31
SOX2-OT-244ENST00000627738 PEAK1Q9H792 1746 aa13.13□□□□□ -0.31
SOX2-OT-244ENST00000627738 MAP3K19Q56UN5 1328 aa13.13□□□□□ -0.31
SOX2-OT-244ENST00000627738 NPHP3Q7Z494 1330 aa13.13□□□□□ -0.31
SOX2-OT-244ENST00000627738 LMOD2Q6P5Q4 547 aa13.12□□□□□ -0.31
SOX2-OT-244ENST00000627738 SBNO1A3KN83 1393 aa13.11□□□□□ -0.31
SOX2-OT-244ENST00000627738 LTBP4Q8N2S1 1624 aa13.11□□□□□ -0.31
SOX2-OT-244ENST00000627738 AMPHP49418 695 aa13.11□□□□□ -0.31
SOX2-OT-244ENST00000627738 HSP90AB2PQ58FF8 381 aa13.11□□□□□ -0.31
SOX2-OT-244ENST00000627738 RYDENQ9NUL5 291 aaKnown RBP13.11□□□□□ -0.31
SOX2-OT-244ENST00000627738 FLT4P35916 1363 aa13.1□□□□□ -0.31
SOX2-OT-244ENST00000627738 IRX5P78411 483 aaPredicted RBP13.1□□□□□ -0.31
SOX2-OT-244ENST00000627738 PDE3BQ13370 1112 aa13.1□□□□□ -0.31
SOX2-OT-244ENST00000627738 EIF4A2Q14240 407 aaKnown RBP13.1□□□□□ -0.31
SOX2-OT-244ENST00000627738 TCP11L2Q8N4U5 519 aa13.09□□□□□ -0.31
SOX2-OT-244ENST00000627738 KCNH5Q8NCM2 988 aa13.09□□□□□ -0.31
SOX2-OT-244ENST00000627738 PLEKHF1Q96S99 279 aa13.09□□□□□ -0.31
SOX2-OT-244ENST00000627738 IQSEC2Q5JU85 1478 aa13.09□□□□□ -0.31
SOX2-OT-244ENST00000627738 PXDNQ92626 1479 aa13.09□□□□□ -0.31
SOX2-OT-244ENST00000627738 ALS2Q96Q42 1657 aa13.08□□□□□ -0.31
SOX2-OT-244ENST00000627738 SLIT3O75094 1523 aa13.08□□□□□ -0.31
SOX2-OT-244ENST00000627738 NFAT5O94916 1531 aa13.08□□□□□ -0.31
SOX2-OT-244ENST00000627738 FCHSD2O94868 740 aa13.08□□□□□ -0.32
SOX2-OT-244ENST00000627738 HMOX1P09601 288 aa13.08□□□□□ -0.32
SOX2-OT-244ENST00000627738 HOXC9P31274 260 aa13.08□□□□□ -0.32
SOX2-OT-244ENST00000627738 NGEFQ8N5V2 710 aa13.08□□□□□ -0.32
SOX2-OT-244ENST00000627738 CDCA7LQ96GN5 454 aa13.08□□□□□ -0.32
SOX2-OT-244ENST00000627738 RSPH6AQ9H0K4 717 aa13.08□□□□□ -0.32
SOX2-OT-244ENST00000627738 PNNQ9H307 717 aaKnown RBP13.08□□□□□ -0.32
SOX2-OT-244ENST00000627738 PCDH10Q9P2E7 1040 aa13.08□□□□□ -0.32
SOX2-OT-244ENST00000627738 RRP7AQ9Y3A4 280 aaKnown RBP13.08□□□□□ -0.32
SOX2-OT-244ENST00000627738 GTF3C3Q9Y5Q9 886 aa13.08□□□□□ -0.32
SOX2-OT-244ENST00000627738 USP19O94966 1318 aa13.08□□□□□ -0.32
SOX2-OT-244ENST00000627738 ZNF521Q96K83 1311 aa13.08□□□□□ -0.32
SOX2-OT-244ENST00000627738 KIF24Q5T7B8 1368 aa13.07□□□□□ -0.32
SOX2-OT-244ENST00000627738 TNS3Q68CZ2 1445 aa13.07□□□□□ -0.32
SOX2-OT-244ENST00000627738 GCP02774 474 aa13.07□□□□□ -0.32
SOX2-OT-244ENST00000627738 NEUROD2Q15784 382 aa13.07□□□□□ -0.32
SOX2-OT-244ENST00000627738 SPATA31A3Q5VYP0 1347 aa13.07□□□□□ -0.32
SOX2-OT-244ENST00000627738 MAPK8IP3Q9UPT6 1336 aa13.07□□□□□ -0.32
SOX2-OT-244ENST00000627738 ZBTB7CA1YPR0 619 aa13.06□□□□□ -0.32
SOX2-OT-244ENST00000627738 PRKAR2BP31323 418 aa13.06□□□□□ -0.32
SOX2-OT-244ENST00000627738 OCEL1Q9H607 264 aa13.06□□□□□ -0.32
SOX2-OT-244ENST00000627738 SOS2Q07890 1332 aaPredicted RBP13.06□□□□□ -0.32
SOX2-OT-244ENST00000627738 RTL1A6NKG5 1358 aa13.06□□□□□ -0.32
SOX2-OT-244ENST00000627738 LTN1O94822 1766 aa13.05□□□□□ -0.32
SOX2-OT-244ENST00000627738 GOLGA2Q08379 1002 aa13.05□□□□□ -0.32
SOX2-OT-244ENST00000627738 MED1Q15648 1581 aaPredicted RBP13.04□□□□□ -0.32
SOX2-OT-244ENST00000627738 NEFMP07197 916 aa13.04□□□□□ -0.32
SOX2-OT-244ENST00000627738 SULT6B1Q6IMI4 303 aa13.04□□□□□ -0.32
SOX2-OT-244ENST00000627738 ARHGEF25Q86VW2 580 aa13.04□□□□□ -0.32
SOX2-OT-244ENST00000627738 WWC1Q8IX03 1113 aa13.04□□□□□ -0.32
SOX2-OT-244ENST00000627738 IP6K1Q92551 441 aa13.04□□□□□ -0.32
SOX2-OT-244ENST00000627738 ARHGEF10O15013 1369 aa13.04□□□□□ -0.32
SOX2-OT-244ENST00000627738 RGPD1P0DJD0 1748 aa13.03□□□□□ -0.32
SOX2-OT-244ENST00000627738 TMPOP42166 694 aaKnown RBP13.03□□□□□ -0.32
SOX2-OT-244ENST00000627738 CCDC27Q2M243 656 aa13.03□□□□□ -0.32
SOX2-OT-244ENST00000627738 AEBP1Q8IUX7 1158 aa13.03□□□□□ -0.32
SOX2-OT-244ENST00000627738 LTV1Q96GA3 475 aaPredicted RBP13.03□□□□□ -0.32
SOX2-OT-244ENST00000627738 SUPT16HQ9Y5B9 1047 aaKnown RBP13.03□□□□□ -0.32
SOX2-OT-244ENST00000627738 NHSL1Q5SYE7 1610 aa13.02□□□□□ -0.32
SOX2-OT-244ENST00000627738 CABLES1Q8TDN4 633 aa13.02□□□□□ -0.33
SOX2-OT-244ENST00000627738 PHACTR3Q96KR7 559 aa13.02□□□□□ -0.33
SOX2-OT-244ENST00000627738 EYA1Q99502 592 aa13.02□□□□□ -0.33
SOX2-OT-244ENST00000627738 RIPK4P57078 832 aa13.01□□□□□ -0.33
SOX2-OT-244ENST00000627738 ZC3H6P61129 1189 aaKnown RBP13.01□□□□□ -0.33
SOX2-OT-244ENST00000627738 SLFN5Q08AF3 891 aa13.01□□□□□ -0.33
SOX2-OT-244ENST00000627738 IGSF1Q8N6C5 1336 aa13.01□□□□□ -0.33
SOX2-OT-244ENST00000627738 PHRF1Q9P1Y6 1649 aaKnown RBP13.01□□□□□ -0.33
SOX2-OT-244ENST00000627738 NFE2L2Q16236 605 aa13□□□□□ -0.33
SOX2-OT-244ENST00000627738 DUSP27Q5VZP5 1158 aa13□□□□□ -0.33
SOX2-OT-244ENST00000627738 ROBO1Q9Y6N7 1651 aa12.99□□□□□ -0.33
SOX2-OT-244ENST00000627738 E9PSI1 815 aa12.99□□□□□ -0.33
SOX2-OT-244ENST00000627738 WDR63Q8IWG1 891 aa12.99□□□□□ -0.33
SOX2-OT-244ENST00000627738 TRMT2AQ8IZ69 625 aaKnown RBP12.99□□□□□ -0.33
SOX2-OT-244ENST00000627738 CRYBG1Q9Y4K1 1723 aa12.99□□□□□ -0.33
SOX2-OT-244ENST00000627738 KDRP35968 1356 aa12.98□□□□□ -0.33
SOX2-OT-244ENST00000627738 ST18O60284 1047 aa12.98□□□□□ -0.33
SOX2-OT-244ENST00000627738 EFCAB3Q8N7B9 438 aa12.98□□□□□ -0.33
SOX2-OT-244ENST00000627738 NEFLP07196 543 aa12.97□□□□□ -0.33
SOX2-OT-244ENST00000627738 ANKRD24Q8TF21 1146 aa12.97□□□□□ -0.33
SOX2-OT-244ENST00000627738 AXIN2Q9Y2T1 843 aa12.97□□□□□ -0.33
SOX2-OT-244ENST00000627738 NBPF6Q5VWK0 638 aa12.96□□□□□ -0.33
SOX2-OT-244ENST00000627738 USHBP1Q8N6Y0 703 aa12.96□□□□□ -0.33
SOX2-OT-244ENST00000627738 NBPF4Q96M43 638 aa12.96□□□□□ -0.33
SOX2-OT-244ENST00000627738 AHDC1Q5TGY3 1603 aaPredicted RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms