RNA–Protein interactions for RNA: ENST00000627680.2

CCNC-219, Transcript of cyclin C, humanhuman

TSL 5 BASIC

Gene CCNC, Length 896 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-219ENST00000627680 ACSBG1Q96GR2 724 aa24.35■■□□□ 1.49
CCNC-219ENST00000627680 EIF4A2Q14240 407 aaKnown RBP24.34■■□□□ 1.49
CCNC-219ENST00000627680 EYA1Q99502 592 aa24.34■■□□□ 1.49
CCNC-219ENST00000627680 MAP2P11137 1827 aaKnown RBP24.33■■□□□ 1.49
CCNC-219ENST00000627680 RREB1Q92766 1687 aa24.31■■□□□ 1.48
CCNC-219ENST00000627680 PSDA5PKW4 1024 aaPredicted RBP24.31■■□□□ 1.48
CCNC-219ENST00000627680 PROM2Q8N271 834 aa24.31■■□□□ 1.48
CCNC-219ENST00000627680 R3HDM1Q15032 1099 aaKnown RBP24.3■■□□□ 1.48
CCNC-219ENST00000627680 NHSQ6T4R5 1651 aa24.3■■□□□ 1.48
CCNC-219ENST00000627680 NPC1L1Q9UHC9 1359 aa24.29■■□□□ 1.48
CCNC-219ENST00000627680 RGPD3A6NKT7 1758 aaPredicted RBP24.29■■□□□ 1.48
CCNC-219ENST00000627680 RGPD4Q7Z3J3 1758 aa24.29■■□□□ 1.48
CCNC-219ENST00000627680 NBPF14Q5TI25 921 aa24.28■■□□□ 1.48
CCNC-219ENST00000627680 PCDH11XQ9BZA7 1347 aa24.27■■□□□ 1.48
CCNC-219ENST00000627680 PCDH11YQ9BZA8 1340 aa24.27■■□□□ 1.48
CCNC-219ENST00000627680 TXNRD1Q16881 649 aa24.26■■□□□ 1.47
CCNC-219ENST00000627680 CC2D1BQ5T0F9 858 aaKnown RBP24.26■■□□□ 1.47
CCNC-219ENST00000627680 IGSF1Q8N6C5 1336 aa24.26■■□□□ 1.47
CCNC-219ENST00000627680 NUP188Q5SRE5 1749 aa24.26■■□□□ 1.47
CCNC-219ENST00000627680 SHANK3Q9BYB0 1731 aa24.26■■□□□ 1.47
CCNC-219ENST00000627680 CYP27B1O15528 508 aa24.25■■□□□ 1.47
CCNC-219ENST00000627680 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.25■■□□□ 1.475e-8■□□□□ 9.6
CCNC-219ENST00000627680 PRIM1P49642 420 aaKnown RBP24.24■■□□□ 1.47
CCNC-219ENST00000627680 PLEKHG2Q9H7P9 1386 aa24.23■■□□□ 1.47
CCNC-219ENST00000627680 SPG7Q9UQ90 795 aa24.22■■□□□ 1.47
CCNC-219ENST00000627680 MTHFSP49914 203 aa24.21■■□□□ 1.47
CCNC-219ENST00000627680 SYTL4Q96C24 671 aaPredicted RBP24.21■■□□□ 1.47
CCNC-219ENST00000627680 ANO8Q9HCE9 1232 aaPredicted RBP24.21■■□□□ 1.47
CCNC-219ENST00000627680 IL13P35225 146 aa24.2■■□□□ 1.46
CCNC-219ENST00000627680 NKX1-1Q15270 411 aaPredicted RBP24.2■■□□□ 1.46
CCNC-219ENST00000627680 PKD1L3Q7Z443 1732 aa24.18■■□□□ 1.46
CCNC-219ENST00000627680 BTAF1O14981 1849 aa24.17■■□□□ 1.46
CCNC-219ENST00000627680 DOT1LQ8TEK3 1739 aa24.15■■□□□ 1.46
CCNC-219ENST00000627680 PHKG2P15735 406 aa24.14■■□□□ 1.45
CCNC-219ENST00000627680 SLC27A3Q5K4L6 730 aa24.14■■□□□ 1.45
CCNC-219ENST00000627680 AEBP1Q8IUX7 1158 aa24.14■■□□□ 1.45
CCNC-219ENST00000627680 IFNL2Q8IZJ0 200 aa24.14■■□□□ 1.45
CCNC-219ENST00000627680 LRRC4BQ9NT99 713 aa24.14■■□□□ 1.45
CCNC-219ENST00000627680 KDRP35968 1356 aa24.14■■□□□ 1.45
CCNC-219ENST00000627680 CNGB1Q14028 1251 aaPredicted RBP24.13■■□□□ 1.45
CCNC-219ENST00000627680 SULT6B1Q6IMI4 303 aa24.13■■□□□ 1.45
CCNC-219ENST00000627680 STK32BQ9NY57 414 aa24.13■■□□□ 1.45
CCNC-219ENST00000627680 SLC15A2Q16348 729 aa24.12■■□□□ 1.45
CCNC-219ENST00000627680 PLEKHO1Q53GL0 409 aaPredicted RBP24.12■■□□□ 1.45
CCNC-219ENST00000627680 LRP5O75197 1615 aa24.11■■□□□ 1.45
CCNC-219ENST00000627680 AMOTQ4VCS5 1084 aa24.11■■□□□ 1.45
CCNC-219ENST00000627680 DIAPH1O60610 1272 aaKnown RBP24.1■■□□□ 1.45
CCNC-219ENST00000627680 MPRIPQ6WCQ1 1025 aa24.1■■□□□ 1.45
CCNC-219ENST00000627680 KAT6BQ8WYB5 2073 aa24.1■■□□□ 1.45
CCNC-219ENST00000627680 PAPPAQ13219 1627 aa24.08■■□□□ 1.45
CCNC-219ENST00000627680 PIGBQ92521 554 aa24.07■■□□□ 1.44
CCNC-219ENST00000627680 COL3A1P02461 1466 aaPredicted RBP24.07■■□□□ 1.44
CCNC-219ENST00000627680 HSP90AB1P08238 724 aaKnown RBP24.06■■□□□ 1.44
CCNC-219ENST00000627680 TOGARAM1Q9Y4F4 1720 aa24.06■■□□□ 1.44
CCNC-219ENST00000627680 ZNF827Q17R98 1081 aa24.05■■□□□ 1.44
CCNC-219ENST00000627680 ZNF530Q6P9A1 599 aaPredicted RBP24.05■■□□□ 1.44
CCNC-219ENST00000627680 AKT1S1Q96B36 256 aa24.05■■□□□ 1.44
CCNC-219ENST00000627680 PDGFDQ9GZP0 370 aaPredicted RBP24.05■■□□□ 1.44
CCNC-219ENST00000627680 CCNL1Q9UK58 526 aaPredicted RBP24.05■■□□□ 1.44
CCNC-219ENST00000627680 KCNQ4P56696 695 aa24.04■■□□□ 1.44
CCNC-219ENST00000627680 SMARCC1Q92922 1105 aaPredicted RBP24.04■■□□□ 1.44
CCNC-219ENST00000627680 DCAF5Q96JK2 942 aa24.04■■□□□ 1.44
CCNC-219ENST00000627680 PALLDQ8WX93 1383 aa24.03■■□□□ 1.44
CCNC-219ENST00000627680 TMOD3Q9NYL9 352 aa24.03■■□□□ 1.44
CCNC-219ENST00000627680 LY75O60449 1722 aa24.02■■□□□ 1.44
CCNC-219ENST00000627680 ERVV-2B6SEH9 535 aa24.02■■□□□ 1.44
CCNC-219ENST00000627680 HMOX1P09601 288 aa24.02■■□□□ 1.44
CCNC-219ENST00000627680 PPP2R1AP30153 589 aa24.02■■□□□ 1.44
CCNC-219ENST00000627680 SPON1Q9HCB6 807 aa24.02■■□□□ 1.44
CCNC-219ENST00000627680 C1orf141Q5JVX7 400 aa24■■□□□ 1.43
CCNC-219ENST00000627680 CASZ1Q86V15 1759 aa24■■□□□ 1.43
CCNC-219ENST00000627680 CFAP53Q96M91 514 aa23.99■■□□□ 1.43
CCNC-219ENST00000627680 KDM6AO15550 1401 aaPredicted RBP23.99■■□□□ 1.43
CCNC-219ENST00000627680 HMGB2P26583 209 aaKnown RBP23.98■■□□□ 1.43
CCNC-219ENST00000627680 U2SURPO15042 1029 aaKnown RBP23.97■■□□□ 1.43
CCNC-219ENST00000627680 ZBTB7AO95365 584 aa23.97■■□□□ 1.43
CCNC-219ENST00000627680 ITGB4P16144 1822 aa23.97■■□□□ 1.43
CCNC-219ENST00000627680 AKAP4Q5JQC9 854 aa23.97■■□□□ 1.43
CCNC-219ENST00000627680 ASAP1Q9ULH1 1129 aa23.97■■□□□ 1.43
CCNC-219ENST00000627680 ZEB1P37275 1124 aaPredicted RBP23.96■■□□□ 1.43
CCNC-219ENST00000627680 ATG3Q9NT62 314 aa23.96■■□□□ 1.43
CCNC-219ENST00000627680 MTFR1LQ9H019 292 aa23.95■■□□□ 1.42
CCNC-219ENST00000627680 TFCP2L1Q9NZI6 479 aa23.95■■□□□ 1.42
CCNC-219ENST00000627680 PNPLA7Q6ZV29 1317 aa23.94■■□□□ 1.42
CCNC-219ENST00000627680 LOC102724428A0A0B4J2F2 783 aa23.94■■□□□ 1.42
CCNC-219ENST00000627680 SIK1P57059 783 aa23.94■■□□□ 1.42
CCNC-219ENST00000627680 CABP4P57796 275 aa23.94■■□□□ 1.42
CCNC-219ENST00000627680 MTHFSDQ2M296 383 aaKnown RBP23.94■■□□□ 1.42
CCNC-219ENST00000627680 PTGER2P43116 358 aa23.92■■□□□ 1.42
CCNC-219ENST00000627680 DDX10Q13206 875 aaKnown RBP23.92■■□□□ 1.42
CCNC-219ENST00000627680 NUDCQ9Y266 331 aa23.92■■□□□ 1.42
CCNC-219ENST00000627680 ATF5Q9Y2D1 282 aaPredicted RBP23.92■■□□□ 1.42
CCNC-219ENST00000627680 SLC16A10Q8TF71 515 aa23.91■■□□□ 1.42
CCNC-219ENST00000627680 NFATC2IPQ8NCF5 419 aa23.9■■□□□ 1.42
CCNC-219ENST00000627680 SGIP1Q9BQI5 828 aa23.9■■□□□ 1.42
CCNC-219ENST00000627680 PPP1R1BQ9UD71 204 aaPredicted RBP23.89■■□□□ 1.41
CCNC-219ENST00000627680 RNMTO43148 476 aaKnown RBP23.88■■□□□ 1.41
CCNC-219ENST00000627680 RSPH6AQ9H0K4 717 aa23.88■■□□□ 1.41
CCNC-219ENST00000627680 LGR6Q9HBX8 967 aa23.88■■□□□ 1.41
CCNC-219ENST00000627680 QSER1Q2KHR3 1735 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms