RNA–Protein interactions for RNA: ENST00000626466.1

TCF4-253, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-253ENST00000626466 PELP1Q8IZL8 1130 aaKnown RBP15.13■□□□□ 0.01
TCF4-253ENST00000626466 FAM208AQ9UK61 1670 aaKnown RBP15.12■□□□□ 0.01
TCF4-253ENST00000626466 QSER1Q2KHR3 1735 aa15.12■□□□□ 0.01
TCF4-253ENST00000626466 DOT1LQ8TEK3 1739 aa15.12■□□□□ 0.01
TCF4-253ENST00000626466 SHANK3Q9BYB0 1731 aa15.12■□□□□ 0.01
TCF4-253ENST00000626466 MEGF6O75095 1541 aa15.12■□□□□ 0.01
TCF4-253ENST00000626466 PRIM1P49642 420 aaKnown RBP15.11■□□□□ 0.01
TCF4-253ENST00000626466 IP6K1Q92551 441 aa15.11■□□□□ 0.01
TCF4-253ENST00000626466 YBX3P16989 372 aaKnown RBP eCLIP15.1■□□□□ 0.01
TCF4-253ENST00000626466 SLC27A3Q5K4L6 730 aa15.1■□□□□ 0.01
TCF4-253ENST00000626466 HDGFL2Q7Z4V5 671 aaPredicted RBP15.1■□□□□ 0.01
TCF4-253ENST00000626466 SYTL4Q96C24 671 aaPredicted RBP15.1■□□□□ 0.01
TCF4-253ENST00000626466 RNF39Q9H2S5 420 aa15.1■□□□□ 0.01
TCF4-253ENST00000626466 FOXD4L1Q9NU39 408 aa15.1■□□□□ 0.01
TCF4-253ENST00000626466 MAP3K19Q56UN5 1328 aa15.1■□□□□ 0.01
TCF4-253ENST00000626466 ANKRD36BQ8N2N9 1353 aa15.1■□□□□ 0.01
TCF4-253ENST00000626466 CARD11Q9BXL7 1154 aa15.09■□□□□ 0.01
TCF4-253ENST00000626466 TFCP2L1Q9NZI6 479 aa15.09■□□□□ 0.01
TCF4-253ENST00000626466 SLC16A10Q8TF71 515 aa15.08■□□□□ 0
TCF4-253ENST00000626466 LY75O60449 1722 aa15.08■□□□□ 0
TCF4-253ENST00000626466 RGPD2P0DJD1 1756 aa15.08■□□□□ 0
TCF4-253ENST00000626466 GIGYF1O75420 1035 aaPredicted RBP15.07■□□□□ 0
TCF4-253ENST00000626466 POLD1P28340 1107 aa15.07■□□□□ 0
TCF4-253ENST00000626466 MSL1Q68DK7 614 aa15.07■□□□□ 0
TCF4-253ENST00000626466 UTRNP46939 3433 aa15.07■□□□□ 0
TCF4-253ENST00000626466 HOXC9P31274 260 aa15.06■□□□□ 0
TCF4-253ENST00000626466 COL23A1Q86Y22 540 aaPredicted RBP15.06■□□□□ 0
TCF4-253ENST00000626466 USHBP1Q8N6Y0 703 aa15.06■□□□□ 0
TCF4-253ENST00000626466 TERF2IPQ9NYB0 399 aa15.05■□□□□ -0
TCF4-253ENST00000626466 CCNL1Q9UK58 526 aaPredicted RBP15.05■□□□□ -0
TCF4-253ENST00000626466 ZCRB1Q8TBF4 217 aaKnown RBP15.03■□□□□ -0
TCF4-253ENST00000626466 KAT6BQ8WYB5 2073 aa15.03■□□□□ -0
TCF4-253ENST00000626466 AMPHP49418 695 aa15.02■□□□□ -0
TCF4-253ENST00000626466 RRS1Q15050 365 aaKnown RBP15.02■□□□□ -0
TCF4-253ENST00000626466 NBPF6Q5VWK0 638 aa15.02■□□□□ -0
TCF4-253ENST00000626466 NBPF4Q96M43 638 aa15.02■□□□□ -0
TCF4-253ENST00000626466 TESK2Q96S53 571 aa15.02■□□□□ -0
TCF4-253ENST00000626466 ATP10DQ9P241 1426 aa15.01□□□□□ -0.01
TCF4-253ENST00000626466 SMIM5Q71RC9 77 aa15.01□□□□□ -0.01
TCF4-253ENST00000626466 AMIGO3Q86WK7 504 aa15.01□□□□□ -0.01
TCF4-253ENST00000626466 COG3Q96JB2 828 aa15.01□□□□□ -0.01
TCF4-253ENST00000626466 USP47Q96K76 1375 aa14.99□□□□□ -0.01
TCF4-253ENST00000626466 C5P01031 1676 aa14.99□□□□□ -0.01
TCF4-253ENST00000626466 TOGARAM1Q9Y4F4 1720 aa14.98□□□□□ -0.01
TCF4-253ENST00000626466 ST20-MTHFSA0A0A6YYL1 179 aa14.98□□□□□ -0.01
TCF4-253ENST00000626466 PUS7Q96PZ0 661 aaKnown RBP14.98□□□□□ -0.01
TCF4-253ENST00000626466 GGNBP2Q9H3C7 697 aa14.98□□□□□ -0.01
TCF4-253ENST00000626466 WWC3Q9ULE0 1092 aa14.98□□□□□ -0.01
TCF4-253ENST00000626466 RTL1A6NKG5 1358 aa14.98□□□□□ -0.01
TCF4-253ENST00000626466 PALLDQ8WX93 1383 aa14.98□□□□□ -0.01
TCF4-253ENST00000626466 ADCY9O60503 1353 aa14.97□□□□□ -0.01
TCF4-253ENST00000626466 FYB1O15117 783 aa14.95□□□□□ -0.02
TCF4-253ENST00000626466 CYP27B1O15528 508 aa14.95□□□□□ -0.02
TCF4-253ENST00000626466 GRIN3BO60391 1043 aa14.95□□□□□ -0.02
TCF4-253ENST00000626466 HSP90AB2PQ58FF8 381 aa14.95□□□□□ -0.02
TCF4-253ENST00000626466 IFFO2Q5TF58 517 aa14.95□□□□□ -0.02
TCF4-253ENST00000626466 ZNF526Q8TF50 670 aaPredicted RBP14.95□□□□□ -0.02
TCF4-253ENST00000626466 RAPGEF4Q8WZA2 1011 aa14.94□□□□□ -0.02
TCF4-253ENST00000626466 TONSLQ96HA7 1378 aa14.94□□□□□ -0.02
TCF4-253ENST00000626466 C4BP0C0L5 1744 aa14.94□□□□□ -0.02
TCF4-253ENST00000626466 TAF1LQ8IZX4 1826 aa14.94□□□□□ -0.02
TCF4-253ENST00000626466 TATP17735 454 aaPredicted RBP14.93□□□□□ -0.02
TCF4-253ENST00000626466 MPRIPQ6WCQ1 1025 aa14.93□□□□□ -0.02
TCF4-253ENST00000626466 CD2APQ9Y5K6 639 aa14.93□□□□□ -0.02
TCF4-253ENST00000626466 PCDH11XQ9BZA7 1347 aa14.92□□□□□ -0.02
TCF4-253ENST00000626466 PCDH11YQ9BZA8 1340 aa14.92□□□□□ -0.02
TCF4-253ENST00000626466 PHF14O94880 888 aa14.92□□□□□ -0.02
TCF4-253ENST00000626466 INSRP06213 1382 aa14.92□□□□□ -0.02
TCF4-253ENST00000626466 CGNL1Q0VF96 1302 aa14.92□□□□□ -0.02
TCF4-253ENST00000626466 SMG6Q86US8 1419 aaKnown RBP14.91□□□□□ -0.02
TCF4-253ENST00000626466 IGSF1Q8N6C5 1336 aa14.91□□□□□ -0.02
TCF4-253ENST00000626466 PIGBQ92521 554 aa14.9□□□□□ -0.02
TCF4-253ENST00000626466 GPBP1L1Q9HC44 474 aaPredicted RBP14.9□□□□□ -0.02
TCF4-253ENST00000626466 GOLGB1Q14789 3259 aaKnown RBP14.9□□□□□ -0.02
TCF4-253ENST00000626466 PKD1L3Q7Z443 1732 aa14.89□□□□□ -0.03
TCF4-253ENST00000626466 FLT4P35916 1363 aa14.89□□□□□ -0.03
TCF4-253ENST00000626466 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.89□□□□□ -0.03
TCF4-253ENST00000626466 LINC00116Q8NCU8 138 aa14.89□□□□□ -0.03
TCF4-253ENST00000626466 AK7Q96M32 723 aa14.89□□□□□ -0.03
TCF4-253ENST00000626466 EMILIN1Q9Y6C2 1016 aa14.89□□□□□ -0.03
TCF4-253ENST00000626466 NCAPD2Q15021 1401 aa14.89□□□□□ -0.03
TCF4-253ENST00000626466 UBR3Q6ZT12 1888 aa14.89□□□□□ -0.03
TCF4-253ENST00000626466 MAP2P11137 1827 aaKnown RBP14.88□□□□□ -0.03
TCF4-253ENST00000626466 ITGB4P16144 1822 aa14.88□□□□□ -0.03
TCF4-253ENST00000626466 KIF20BQ96Q89 1820 aa14.87□□□□□ -0.03
TCF4-253ENST00000626466 HSPA6P17066 643 aa14.87□□□□□ -0.03
TCF4-253ENST00000626466 ITPK1Q13572 414 aa14.87□□□□□ -0.03
TCF4-253ENST00000626466 FLAD1Q8NFF5 587 aa14.87□□□□□ -0.03
TCF4-253ENST00000626466 CARD14Q9BXL6 1004 aa14.87□□□□□ -0.03
TCF4-253ENST00000626466 SLC4A2P04920 1241 aa14.86□□□□□ -0.03
TCF4-253ENST00000626466 LOC102724428A0A0B4J2F2 783 aa14.85□□□□□ -0.03
TCF4-253ENST00000626466 KIF3CO14782 793 aa14.85□□□□□ -0.03
TCF4-253ENST00000626466 SIK1P57059 783 aa14.85□□□□□ -0.03
TCF4-253ENST00000626466 SMARCC1Q92922 1105 aaPredicted RBP14.85□□□□□ -0.03
TCF4-253ENST00000626466 ASAP1Q9ULH1 1129 aa14.85□□□□□ -0.03
TCF4-253ENST00000626466 CICQ96RK0 1608 aaPredicted RBP14.84□□□□□ -0.03
TCF4-253ENST00000626466 NSD3Q9BZ95 1437 aa14.84□□□□□ -0.03
TCF4-253ENST00000626466 NKX1-1Q15270 411 aaPredicted RBP14.84□□□□□ -0.03
TCF4-253ENST00000626466 KIAA1551Q9HCM1 1747 aa14.83□□□□□ -0.03
TCF4-253ENST00000626466 PXDNLA1KZ92 1463 aa14.83□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms