RNA–Protein interactions for RNA: ENST00000626257.2

CCZ1B-215, Transcript of CCZ1 homolog B, vacuolar protein trafficking and biogenesis associated, human

TSL 2 BASIC

Gene CCZ1B, Length 2,211 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCZ1B-215	ENST00000626257	MTHFSD	Q2M296	383 aa	Known RBP	32.96	■■■□□ 2.87
CCZ1B-215	ENST00000626257	AMPH	P49418	695 aa		32.94	■■■□□ 2.86
CCZ1B-215	ENST00000626257	XRN1	Q8IZH2	1706 aa	Known RBP	32.94	■■■□□ 2.86
CCZ1B-215	ENST00000626257	KDR	P35968	1356 aa		32.94	■■■□□ 2.86
CCZ1B-215	ENST00000626257	RBM25	P49756	843 aa	Known RBP	32.94	■■■□□ 2.86
CCZ1B-215	ENST00000626257	PIK3C2A	O00443	1686 aa		32.94	■■■□□ 2.86
CCZ1B-215	ENST00000626257	EYA1	Q99502	592 aa		32.92	■■■□□ 2.86
CCZ1B-215	ENST00000626257	RIMS1	Q86UR5	1692 aa	Known RBP	32.92	■■■□□ 2.86
CCZ1B-215	ENST00000626257	MIS18A	Q9NYP9	233 aa		32.92	■■■□□ 2.86
CCZ1B-215	ENST00000626257	PTPRC	P08575	1304 aa		32.91	■■■□□ 2.86
CCZ1B-215	ENST00000626257	IGSF1	Q8N6C5	1336 aa		32.91	■■■□□ 2.86
CCZ1B-215	ENST00000626257	SPRYD3	Q8NCJ5	442 aa		32.91	■■■□□ 2.86
CCZ1B-215	ENST00000626257	RTF1	Q92541	710 aa	Known RBP	32.91	■■■□□ 2.86
CCZ1B-215	ENST00000626257	DCTPP1	Q9H773	170 aa		32.9	■■■□□ 2.86
CCZ1B-215	ENST00000626257	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	32.89	■■■□□ 2.86
CCZ1B-215	ENST00000626257	KCNA6	P17658	529 aa		32.89	■■■□□ 2.86
CCZ1B-215	ENST00000626257	ANKAR	Q7Z5J8	1434 aa		32.89	■■■□□ 2.86
CCZ1B-215	ENST00000626257	NLRP6	P59044	892 aa		32.89	■■■□□ 2.86
CCZ1B-215	ENST00000626257	ATP10D	Q9P241	1426 aa		32.87	■■■□□ 2.85
CCZ1B-215	ENST00000626257	ANKRD44	Q8N8A2	993 aa		32.87	■■■□□ 2.85
CCZ1B-215	ENST00000626257	TSPYL4	Q9UJ04	414 aa		32.87	■■■□□ 2.85
CCZ1B-215	ENST00000626257	SLC4A2	P04920	1241 aa		32.86	■■■□□ 2.85
CCZ1B-215	ENST00000626257	MSH6	P52701	1360 aa		32.86	■■■□□ 2.85
CCZ1B-215	ENST00000626257	HSCB	Q8IWL3	235 aa		32.86	■■■□□ 2.85
CCZ1B-215	ENST00000626257	GAS2L2	Q8NHY3	880 aa		32.86	■■■□□ 2.85
CCZ1B-215	ENST00000626257	TBC1D9	Q6ZT07	1266 aa		32.85	■■■□□ 2.85
CCZ1B-215	ENST00000626257	RPAP2	Q8IXW5	612 aa	Predicted RBP	32.84	■■■□□ 2.85
CCZ1B-215	ENST00000626257	CEP85	Q6P2H3	762 aa		32.83	■■■□□ 2.85
CCZ1B-215	ENST00000626257	PLEKHM2	Q8IWE5	1019 aa		32.82	■■■□□ 2.85
CCZ1B-215	ENST00000626257	RTL1	A6NKG5	1358 aa		32.82	■■■□□ 2.84
CCZ1B-215	ENST00000626257	NUTM2G	Q5VZR2	741 aa		32.82	■■■□□ 2.84
CCZ1B-215	ENST00000626257	TRH	P20396	242 aa	Predicted RBP	32.81	■■■□□ 2.84
CCZ1B-215	ENST00000626257	MEIS3	Q99687	375 aa		32.81	■■■□□ 2.84
CCZ1B-215	ENST00000626257	HOXC9	P31274	260 aa		32.8	■■■□□ 2.84
CCZ1B-215	ENST00000626257	SNX21	Q969T3	373 aa		32.8	■■■□□ 2.84
CCZ1B-215	ENST00000626257	GSPT1	P15170	499 aa	Known RBP	32.79	■■■□□ 2.84
CCZ1B-215	ENST00000626257	CHMP5	Q9NZZ3	219 aa		32.79	■■■□□ 2.84
CCZ1B-215	ENST00000626257	MARF1	Q9Y4F3	1742 aa	Known RBP	32.79	■■■□□ 2.84
CCZ1B-215	ENST00000626257	G2E3	Q7L622	706 aa		32.78	■■■□□ 2.84
CCZ1B-215	ENST00000626257	HTATSF1	O43719	755 aa	Known RBP	32.77	■■■□□ 2.84
CCZ1B-215	ENST00000626257	CDC45	O75419	566 aa		32.77	■■■□□ 2.84
CCZ1B-215	ENST00000626257	KIF2C	Q99661	725 aa		32.77	■■■□□ 2.84
CCZ1B-215	ENST00000626257	ABTB2	Q8N961	1025 aa		32.76	■■■□□ 2.83
CCZ1B-215	ENST00000626257	C16orf71	Q8IYS4	520 aa	Predicted RBP	32.75	■■■□□ 2.83
CCZ1B-215	ENST00000626257	NCOA3	Q9Y6Q9	1424 aa		32.74	■■■□□ 2.83
CCZ1B-215	ENST00000626257	NWD1	Q149M9	1564 aa		32.74	■■■□□ 2.83
CCZ1B-215	ENST00000626257	USP54	Q70EL1	1684 aa		32.74	■■■□□ 2.83
CCZ1B-215	ENST00000626257	GNAT3	A8MTJ3	354 aa		32.73	■■■□□ 2.83
CCZ1B-215	ENST00000626257	TTC22	Q5TAA0	569 aa		32.73	■■■□□ 2.83
CCZ1B-215	ENST00000626257	LRRC37A3	O60309	1634 aa		32.73	■■■□□ 2.83
CCZ1B-215	ENST00000626257		F6X3S4	739 aa		32.73	■■■□□ 2.83
CCZ1B-215	ENST00000626257	IL27	Q8NEV9	243 aa		32.73	■■■□□ 2.83
CCZ1B-215	ENST00000626257	SLC4A10	Q6U841	1118 aa		32.71	■■■□□ 2.83
CCZ1B-215	ENST00000626257	CCT4	P50991	539 aa	Known RBP	32.71	■■■□□ 2.83
CCZ1B-215	ENST00000626257	ZNF142	P52746	1687 aa	Predicted RBP	32.7	■■■□□ 2.82
CCZ1B-215	ENST00000626257	MCM4	P33991	863 aa		32.69	■■■□□ 2.82
CCZ1B-215	ENST00000626257	OTUD7A	Q8TE49	926 aa	Predicted RBP	32.69	■■■□□ 2.82
CCZ1B-215	ENST00000626257	LTV1	Q96GA3	475 aa	Predicted RBP	32.69	■■■□□ 2.82
CCZ1B-215	ENST00000626257	STK31	Q9BXU1	1019 aa		32.69	■■■□□ 2.82
CCZ1B-215	ENST00000626257	SMARCA5	O60264	1052 aa	Predicted RBP	32.67	■■■□□ 2.82
CCZ1B-215	ENST00000626257	DDIT3	P35638	169 aa		32.67	■■■□□ 2.82
CCZ1B-215	ENST00000626257	MAP3K5	Q99683	1374 aa		32.67	■■■□□ 2.82
CCZ1B-215	ENST00000626257	APBB1	O00213	710 aa		32.66	■■■□□ 2.82
CCZ1B-215	ENST00000626257	C14orf37	Q86TY3	774 aa		32.66	■■■□□ 2.82
CCZ1B-215	ENST00000626257	IL17RE	Q8NFR9	667 aa		32.66	■■■□□ 2.82
CCZ1B-215	ENST00000626257	BRPF3	Q9ULD4	1205 aa		32.66	■■■□□ 2.82
CCZ1B-215	ENST00000626257	PHF8	Q9UPP1	1060 aa		32.66	■■■□□ 2.82
CCZ1B-215	ENST00000626257	HMMR	O75330	724 aa		32.65	■■■□□ 2.82
CCZ1B-215	ENST00000626257	HSP90AB1	P08238	724 aa	Known RBP	32.65	■■■□□ 2.82
CCZ1B-215	ENST00000626257	CCDC30	Q5VVM6	783 aa		32.65	■■■□□ 2.82
CCZ1B-215	ENST00000626257	DNAJC5	Q9H3Z4	198 aa		32.64	■■■□□ 2.82
CCZ1B-215	ENST00000626257	EIF5B	O60841	1220 aa	Known RBP	32.63	■■■□□ 2.81
CCZ1B-215	ENST00000626257	ADAMTSL3	P82987	1691 aa		32.63	■■■□□ 2.81
CCZ1B-215	ENST00000626257	CD2BP2	O95400	341 aa	Known RBP	32.62	■■■□□ 2.81
CCZ1B-215	ENST00000626257	FLII	Q13045	1269 aa		32.62	■■■□□ 2.81
CCZ1B-215	ENST00000626257	CHD2	O14647	1828 aa	Known RBP	32.61	■■■□□ 2.81
CCZ1B-215	ENST00000626257	ANKLE2	Q86XL3	938 aa		32.61	■■■□□ 2.81
CCZ1B-215	ENST00000626257	RBM42	Q9BTD8	480 aa	Known RBP	32.61	■■■□□ 2.81
CCZ1B-215	ENST00000626257	FAM208A	Q9UK61	1670 aa	Known RBP	32.61	■■■□□ 2.81
CCZ1B-215	ENST00000626257	TAF7	Q15545	349 aa	Predicted RBP	32.61	■■■□□ 2.81
CCZ1B-215	ENST00000626257	USHBP1	Q8N6Y0	703 aa		32.61	■■■□□ 2.81
CCZ1B-215	ENST00000626257	GNAI2	P04899	355 aa		32.59	■■■□□ 2.81
CCZ1B-215	ENST00000626257	SDS	P20132	328 aa		32.59	■■■□□ 2.81
CCZ1B-215	ENST00000626257	FKBP5	Q13451	457 aa	Predicted RBP	32.59	■■■□□ 2.81
CCZ1B-215	ENST00000626257	NECTIN2	Q92692	538 aa		32.59	■■■□□ 2.81
CCZ1B-215	ENST00000626257	RBM33	Q96EV2	1170 aa	Known RBP	32.59	■■■□□ 2.81
CCZ1B-215	ENST00000626257	BABAM1	Q9NWV8	329 aa		32.59	■■■□□ 2.81
CCZ1B-215	ENST00000626257	SOS1	Q07889	1333 aa	Predicted RBP	32.58	■■■□□ 2.81
CCZ1B-215	ENST00000626257		K7ELQ4	463 aa	Predicted RBP	32.57	■■■□□ 2.8
CCZ1B-215	ENST00000626257	LTN1	O94822	1766 aa		32.57	■■■□□ 2.8
CCZ1B-215	ENST00000626257	IP6K1	Q92551	441 aa		32.57	■■■□□ 2.8
CCZ1B-215	ENST00000626257	CIZ1	Q9ULV3	898 aa	Predicted RBP	32.57	■■■□□ 2.8
CCZ1B-215	ENST00000626257	USP26	Q9BXU7	913 aa		32.54	■■■□□ 2.8
CCZ1B-215	ENST00000626257	SETD1B	Q9UPS6	1966 aa	Known RBP	32.53	■■■□□ 2.8
CCZ1B-215	ENST00000626257	NFAT5	O94916	1531 aa		32.53	■■■□□ 2.8
CCZ1B-215	ENST00000626257	GNAI3	P08754	354 aa		32.53	■■■□□ 2.8
CCZ1B-215	ENST00000626257	CACNA1F	O60840	1977 aa		32.52	■■■□□ 2.8
CCZ1B-215	ENST00000626257	CASC1	Q6TDU7	716 aa		32.52	■■■□□ 2.8
CCZ1B-215	ENST00000626257	HSP90AA1	P07900	732 aa	Known RBP	32.51	■■■□□ 2.8
CCZ1B-215	ENST00000626257	OSBPL3	Q9H4L5	887 aa		32.51	■■■□□ 2.79

Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms