RNA–Protein interactions for RNA: ENST00000626119.2

COPS7A-222, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3 BASIC

Gene COPS7A, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-222ENST00000626119 PTPRCP08575 1304 aa25.28■■□□□ 1.64
COPS7A-222ENST00000626119 HOXC9P31274 260 aa25.28■■□□□ 1.64
COPS7A-222ENST00000626119 MCM10Q7L590 875 aa25.28■■□□□ 1.64
COPS7A-222ENST00000626119 MTHFSDQ2M296 383 aaKnown RBP25.27■■□□□ 1.64
COPS7A-222ENST00000626119 INTS3Q68E01 1043 aaKnown RBP25.26■■□□□ 1.63
COPS7A-222ENST00000626119 NBR1Q14596 966 aa25.25■■□□□ 1.63
COPS7A-222ENST00000626119 SOS1Q07889 1333 aaPredicted RBP25.24■■□□□ 1.63
COPS7A-222ENST00000626119 BABAM1Q9NWV8 329 aa25.24■■□□□ 1.63
COPS7A-222ENST00000626119 NPHP4O75161 1426 aaPredicted RBP25.24■■□□□ 1.63
COPS7A-222ENST00000626119 CHD1LQ86WJ1 897 aa25.23■■□□□ 1.63
COPS7A-222ENST00000626119 SEC24BO95487 1268 aa25.23■■□□□ 1.63
COPS7A-222ENST00000626119 BECN1Q14457 450 aa25.23■■□□□ 1.63
COPS7A-222ENST00000626119 KCNH5Q8NCM2 988 aa25.21■■□□□ 1.63
COPS7A-222ENST00000626119 TBC1D32Q96NH3 1257 aa25.21■■□□□ 1.63
COPS7A-222ENST00000626119 TSPYL4Q9UJ04 414 aa25.2■■□□□ 1.62
COPS7A-222ENST00000626119 NWD1Q149M9 1564 aa25.2■■□□□ 1.62
COPS7A-222ENST00000626119 LRRC37A3O60309 1634 aa25.19■■□□□ 1.62
COPS7A-222ENST00000626119 GNAT3A8MTJ3 354 aa25.19■■□□□ 1.62
COPS7A-222ENST00000626119 IP6K1Q92551 441 aa25.18■■□□□ 1.62
COPS7A-222ENST00000626119 PSME1Q06323 249 aa25.17■■□□□ 1.62
COPS7A-222ENST00000626119 RGS12O14924 1447 aa25.17■■□□□ 1.62
COPS7A-222ENST00000626119 PHRF1Q9P1Y6 1649 aaKnown RBP25.16■■□□□ 1.62
COPS7A-222ENST00000626119 FOXO3O43524 673 aa25.16■■□□□ 1.62
COPS7A-222ENST00000626119 RPAP2Q8IXW5 612 aaPredicted RBP25.16■■□□□ 1.62
COPS7A-222ENST00000626119 NFAT5O94916 1531 aa25.15■■□□□ 1.62
COPS7A-222ENST00000626119 MAP3K5Q99683 1374 aa25.15■■□□□ 1.62
COPS7A-222ENST00000626119 ESCO1Q5FWF5 840 aa25.15■■□□□ 1.62
COPS7A-222ENST00000626119 BMP2KLQ5H9B9 411 aa25.15■■□□□ 1.62
COPS7A-222ENST00000626119 NUTM2GQ5VZR2 741 aa25.14■■□□□ 1.62
COPS7A-222ENST00000626119 ANKRD45Q5TZF3 282 aa25.13■■□□□ 1.61
COPS7A-222ENST00000626119 C14orf37Q86TY3 774 aa25.13■■□□□ 1.61
COPS7A-222ENST00000626119 SIRT2Q8IXJ6 389 aa25.13■■□□□ 1.61
COPS7A-222ENST00000626119 LNPKQ9C0E8 428 aa25.13■■□□□ 1.61
COPS7A-222ENST00000626119 LTN1O94822 1766 aa25.13■■□□□ 1.61
COPS7A-222ENST00000626119 EIF5BO60841 1220 aaKnown RBP25.13■■□□□ 1.61
COPS7A-222ENST00000626119 KRT24Q2M2I5 525 aa25.13■■□□□ 1.61
COPS7A-222ENST00000626119 SLC4A2P04920 1241 aa25.12■■□□□ 1.61
COPS7A-222ENST00000626119 DCTPP1Q9H773 170 aa25.11■■□□□ 1.61
COPS7A-222ENST00000626119 C1orf115Q9H7X2 142 aa25.11■■□□□ 1.61
COPS7A-222ENST00000626119 SLC4A3P48751 1232 aa25.1■■□□□ 1.61
COPS7A-222ENST00000626119 ANKRD44Q8N8A2 993 aa25.1■■□□□ 1.61
COPS7A-222ENST00000626119 CCT4P50991 539 aaKnown RBP25.1■■□□□ 1.61
COPS7A-222ENST00000626119 STK31Q9BXU1 1019 aa25.1■■□□□ 1.61
COPS7A-222ENST00000626119 CHMP4AQ9BY43 222 aa25.1■■□□□ 1.61
COPS7A-222ENST00000626119 TAF7Q15545 349 aaPredicted RBP25.09■■□□□ 1.61
COPS7A-222ENST00000626119 CCDC30Q5VVM6 783 aa25.08■■□□□ 1.61
COPS7A-222ENST00000626119 C22orf23Q9BZE7 217 aa25.08■■□□□ 1.61
COPS7A-222ENST00000626119 MIS18AQ9NYP9 233 aa25.07■■□□□ 1.6
COPS7A-222ENST00000626119 MSH6P52701 1360 aa25.06■■□□□ 1.6
COPS7A-222ENST00000626119 SLIT3O75094 1523 aa25.06■■□□□ 1.6
COPS7A-222ENST00000626119 ATP10DQ9P241 1426 aa25.06■■□□□ 1.6
COPS7A-222ENST00000626119 IL17REQ8NFR9 667 aa25.05■■□□□ 1.6
COPS7A-222ENST00000626119 CACNA1FO60840 1977 aa25.05■■□□□ 1.6
COPS7A-222ENST00000626119 LTV1Q96GA3 475 aaPredicted RBP25.05■■□□□ 1.6
COPS7A-222ENST00000626119 KIF1AQ12756 1690 aa25.04■■□□□ 1.6
COPS7A-222ENST00000626119 CEMIPQ8WUJ3 1361 aa25.04■■□□□ 1.6
COPS7A-222ENST00000626119 MST1RQ04912 1400 aa25.03■■□□□ 1.6
COPS7A-222ENST00000626119 HMMRO75330 724 aa25.03■■□□□ 1.6
COPS7A-222ENST00000626119 DEKP35659 375 aaKnown RBP25.03■■□□□ 1.6
COPS7A-222ENST00000626119 CEP85Q6P2H3 762 aa25.03■■□□□ 1.6
COPS7A-222ENST00000626119 MFAP1P55081 439 aaKnown RBP25.02■■□□□ 1.6
COPS7A-222ENST00000626119 NFKBIBQ15653 356 aa25.01■■□□□ 1.59
COPS7A-222ENST00000626119 RBM33Q96EV2 1170 aaKnown RBP25.01■■□□□ 1.59
COPS7A-222ENST00000626119 NCAPD2Q15021 1401 aa25.01■■□□□ 1.59
COPS7A-222ENST00000626119 GCP02774 474 aa25■■□□□ 1.59
COPS7A-222ENST00000626119 RBM25P49756 843 aaKnown RBP25■■□□□ 1.59
COPS7A-222ENST00000626119 AMOTQ4VCS5 1084 aa25■■□□□ 1.59
COPS7A-222ENST00000626119 ARHGEF25Q86VW2 580 aa25■■□□□ 1.59
COPS7A-222ENST00000626119 C19orf44Q9H6X5 657 aa25■■□□□ 1.59
COPS7A-222ENST00000626119 HOXB7P09629 217 aa25■■□□□ 1.59
COPS7A-222ENST00000626119 NBPF6Q5VWK0 638 aa25■■□□□ 1.59
COPS7A-222ENST00000626119 PROSER2Q86WR7 435 aaPredicted RBP25■■□□□ 1.59
COPS7A-222ENST00000626119 NBPF4Q96M43 638 aa25■■□□□ 1.59
COPS7A-222ENST00000626119 FAM208AQ9UK61 1670 aaKnown RBP24.99■■□□□ 1.59
COPS7A-222ENST00000626119 MED1Q15648 1581 aaPredicted RBP24.99■■□□□ 1.59
COPS7A-222ENST00000626119 PXDNLA1KZ92 1463 aa24.99■■□□□ 1.59
COPS7A-222ENST00000626119 PLEKHO1Q53GL0 409 aaPredicted RBP24.98■■□□□ 1.59
COPS7A-222ENST00000626119 ORAI2Q96SN7 254 aa24.98■■□□□ 1.59
COPS7A-222ENST00000626119 NCOA3Q9Y6Q9 1424 aa24.98■■□□□ 1.59
COPS7A-222ENST00000626119 FLIIQ13045 1269 aa24.98■■□□□ 1.59
COPS7A-222ENST00000626119 MEIS3Q99687 375 aa24.98■■□□□ 1.59
COPS7A-222ENST00000626119 OVOS2A0A0G2JMS6 1433 aa24.97■■□□□ 1.59
COPS7A-222ENST00000626119 AKAP4Q5JQC9 854 aa24.97■■□□□ 1.59
COPS7A-222ENST00000626119 G2E3Q7L622 706 aa24.97■■□□□ 1.59
COPS7A-222ENST00000626119 TBC1D2Q9BYX2 928 aa24.97■■□□□ 1.59
COPS7A-222ENST00000626119 TRPM3Q9HCF6 1732 aaPredicted RBP24.96■■□□□ 1.59
COPS7A-222ENST00000626119 GNAI3P08754 354 aa24.96■■□□□ 1.59
COPS7A-222ENST00000626119 C1orf167Q5SNV9 1468 aa24.96■■□□□ 1.59
COPS7A-222ENST00000626119 LMO7Q8WWI1 1683 aa24.95■■□□□ 1.58
COPS7A-222ENST00000626119 GNAI2P04899 355 aa24.95■■□□□ 1.58
COPS7A-222ENST00000626119 PLEKHM2Q8IWE5 1019 aa24.95■■□□□ 1.58
COPS7A-222ENST00000626119 USHBP1Q8N6Y0 703 aa24.95■■□□□ 1.58
COPS7A-222ENST00000626119 DCCP43146 1447 aa24.94■■□□□ 1.58
COPS7A-222ENST00000626119 KRT28Q7Z3Y7 464 aa24.94■■□□□ 1.58
COPS7A-222ENST00000626119 LMTK3Q96Q04 1460 aa24.94■■□□□ 1.58
COPS7A-222ENST00000626119 CDC45O75419 566 aa24.93■■□□□ 1.58
COPS7A-222ENST00000626119 FKBP5Q13451 457 aaPredicted RBP24.93■■□□□ 1.58
COPS7A-222ENST00000626119 SLC4A10Q6U841 1118 aa24.93■■□□□ 1.58
COPS7A-222ENST00000626119 N4BP2Q86UW6 1770 aaPredicted RBP24.93■■□□□ 1.58
COPS7A-222ENST00000626119 CAMTA1Q9Y6Y1 1673 aa24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms