RNA–Protein interactions for RNA: ENST00000626021.2

PTP4A1-205, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 2,203 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-205ENST00000626021 COG6Q9Y2V7 657 aa5.25□□□□□ -1.57
PTP4A1-205ENST00000626021 MAP2P11137 1827 aaKnown RBP5.25□□□□□ -1.57
PTP4A1-205ENST00000626021 IBTKQ9P2D0 1353 aaPredicted RBP5.24□□□□□ -1.57
PTP4A1-205ENST00000626021 CFAP70Q5T0N1 1121 aa5.24□□□□□ -1.57
PTP4A1-205ENST00000626021 SMC5Q8IY18 1101 aa5.24□□□□□ -1.57
PTP4A1-205ENST00000626021 PPP1R9BQ96SB3 815 aa5.24□□□□□ -1.57
PTP4A1-205ENST00000626021 MAP7D2Q96T17 732 aa5.24□□□□□ -1.57
PTP4A1-205ENST00000626021 PANK2Q9BZ23 570 aa5.24□□□□□ -1.57
PTP4A1-205ENST00000626021 PCDHB15Q9Y5E8 787 aa5.24□□□□□ -1.57
PTP4A1-205ENST00000626021 ADAMTSL3P82987 1691 aa5.24□□□□□ -1.57
PTP4A1-205ENST00000626021 SLIT1O75093 1534 aa5.24□□□□□ -1.57
PTP4A1-205ENST00000626021 IQSEC2Q5JU85 1478 aa5.24□□□□□ -1.57
PTP4A1-205ENST00000626021 YTHDC2Q9H6S0 1430 aaKnown RBP5.24□□□□□ -1.57
PTP4A1-205ENST00000626021 RBM25P49756 843 aaKnown RBP5.24□□□□□ -1.57
PTP4A1-205ENST00000626021 LSM11P83369 360 aaKnown RBP eCLIP5.24□□□□□ -1.57
PTP4A1-205ENST00000626021 CCDC173Q0VFZ6 552 aa5.24□□□□□ -1.57
PTP4A1-205ENST00000626021 CLEC17AQ6ZS10 378 aa5.24□□□□□ -1.57
PTP4A1-205ENST00000626021 HSCBQ8IWL3 235 aa5.24□□□□□ -1.57
PTP4A1-205ENST00000626021 PANK1Q8TE04 598 aa5.24□□□□□ -1.57
PTP4A1-205ENST00000626021 TRIM44Q96DX7 344 aaPredicted RBP5.24□□□□□ -1.57
PTP4A1-205ENST00000626021 RIMS2Q9UQ26 1411 aa5.23□□□□□ -1.57
PTP4A1-205ENST00000626021 NSD2O96028 1365 aa5.23□□□□□ -1.57
PTP4A1-205ENST00000626021 CANXP27824 592 aaKnown RBP5.23□□□□□ -1.57
PTP4A1-205ENST00000626021 HDAC1Q13547 482 aaPredicted RBP5.23□□□□□ -1.57
PTP4A1-205ENST00000626021 HS1BP3Q53T59 392 aa5.23□□□□□ -1.57
PTP4A1-205ENST00000626021 CCDC146Q8IYE0 955 aa5.23□□□□□ -1.57
PTP4A1-205ENST00000626021 RUNDC1Q96C34 613 aa5.23□□□□□ -1.57
PTP4A1-205ENST00000626021 GBP4Q96PP9 640 aa5.23□□□□□ -1.57
PTP4A1-205ENST00000626021 ATP7BP35670 1465 aa5.23□□□□□ -1.57
PTP4A1-205ENST00000626021 ARHGAP23Q9P227 1491 aa5.23□□□□□ -1.57
PTP4A1-205ENST00000626021 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.23□□□□□ -1.57
PTP4A1-205ENST00000626021 VGFO15240 615 aaPredicted RBP5.23□□□□□ -1.57
PTP4A1-205ENST00000626021 OFD1O75665 1012 aa5.23□□□□□ -1.57
PTP4A1-205ENST00000626021 ECM2O94769 699 aaPredicted RBP5.23□□□□□ -1.57
PTP4A1-205ENST00000626021 CALD1Q05682 793 aaKnown RBP5.23□□□□□ -1.57
PTP4A1-205ENST00000626021 RAB3GAP1Q15042 981 aa5.23□□□□□ -1.57
PTP4A1-205ENST00000626021 Q6ZNB5 142 aa5.23□□□□□ -1.57
PTP4A1-205ENST00000626021 CD163L1Q9NR16 1453 aa5.23□□□□□ -1.57
PTP4A1-205ENST00000626021 CHD2O14647 1828 aaKnown RBP5.22□□□□□ -1.57
PTP4A1-205ENST00000626021 RGPD8O14715 1765 aaPredicted RBP5.22□□□□□ -1.57
PTP4A1-205ENST00000626021 DLG5Q8TDM6 1919 aa5.22□□□□□ -1.57
PTP4A1-205ENST00000626021 MARF1Q9Y4F3 1742 aaKnown RBP5.22□□□□□ -1.57
PTP4A1-205ENST00000626021 COL3A1P02461 1466 aaPredicted RBP5.22□□□□□ -1.57
PTP4A1-205ENST00000626021 IDI1Q13907 227 aa5.22□□□□□ -1.57
PTP4A1-205ENST00000626021 MVPQ14764 893 aaKnown RBP5.22□□□□□ -1.57
PTP4A1-205ENST00000626021 ANKRD36BQ8N2N9 1353 aa5.22□□□□□ -1.57
PTP4A1-205ENST00000626021 ERBB4Q15303 1308 aa5.22□□□□□ -1.57
PTP4A1-205ENST00000626021 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.21□□□□□ -1.57
PTP4A1-205ENST00000626021 NSD3Q9BZ95 1437 aa5.21□□□□□ -1.57
PTP4A1-205ENST00000626021 TNRQ92752 1358 aa5.21□□□□□ -1.57
PTP4A1-205ENST00000626021 LRRC7Q96NW7 1537 aa5.21□□□□□ -1.57
PTP4A1-205ENST00000626021 CEP170BQ9Y4F5 1589 aaPredicted RBP5.21□□□□□ -1.58
PTP4A1-205ENST00000626021 FAM135BQ49AJ0 1406 aa5.21□□□□□ -1.58
PTP4A1-205ENST00000626021 RLBP1P12271 317 aa5.21□□□□□ -1.58
PTP4A1-205ENST00000626021 ZKSCAN2Q63HK3 967 aa5.21□□□□□ -1.58
PTP4A1-205ENST00000626021 MTERF4Q7Z6M4 381 aaKnown RBP5.21□□□□□ -1.58
PTP4A1-205ENST00000626021 ZSCAN30Q86W11 494 aa5.21□□□□□ -1.58
PTP4A1-205ENST00000626021 TNPO1Q92973 898 aaKnown RBP5.21□□□□□ -1.58
PTP4A1-205ENST00000626021 GZF1Q9H116 711 aaPredicted RBP5.21□□□□□ -1.58
PTP4A1-205ENST00000626021 SETD1BQ9UPS6 1966 aaKnown RBP5.21□□□□□ -1.58
PTP4A1-205ENST00000626021 ABCC11Q96J66 1382 aa5.21□□□□□ -1.58
PTP4A1-205ENST00000626021 KIF16BQ96L93 1317 aa5.21□□□□□ -1.58
PTP4A1-205ENST00000626021 PBX2P40425 430 aa5.2□□□□□ -1.58
PTP4A1-205ENST00000626021 GAS2L3Q86XJ1 694 aa5.2□□□□□ -1.58
PTP4A1-205ENST00000626021 DZIP1LQ8IYY4 767 aaKnown RBP5.2□□□□□ -1.58
PTP4A1-205ENST00000626021 DDX19BQ9UMR2 479 aa5.2□□□□□ -1.58
PTP4A1-205ENST00000626021 ATAD2Q6PL18 1390 aa5.2□□□□□ -1.58
PTP4A1-205ENST00000626021 ZNF500O60304 480 aaPredicted RBP5.2□□□□□ -1.58
PTP4A1-205ENST00000626021 KLHL40Q2TBA0 621 aa5.2□□□□□ -1.58
PTP4A1-205ENST00000626021 KIAA1211Q6ZU35 1233 aa5.2□□□□□ -1.58
PTP4A1-205ENST00000626021 CFAP44Q96MT7 982 aa5.2□□□□□ -1.58
PTP4A1-205ENST00000626021 RGPD1P0DJD0 1748 aa5.19□□□□□ -1.58
PTP4A1-205ENST00000626021 GOLGA6L22H0YM25 854 aa5.19□□□□□ -1.58
PTP4A1-205ENST00000626021 RIOK3O14730 519 aaKnown RBP5.19□□□□□ -1.58
PTP4A1-205ENST00000626021 PYGBP11216 843 aa5.19□□□□□ -1.58
PTP4A1-205ENST00000626021 MCM5P33992 734 aa5.19□□□□□ -1.58
PTP4A1-205ENST00000626021 MFAP1P55081 439 aaKnown RBP5.19□□□□□ -1.58
PTP4A1-205ENST00000626021 ZNF445P59923 1031 aa5.19□□□□□ -1.58
PTP4A1-205ENST00000626021 PDAP1Q13442 181 aaKnown RBP5.19□□□□□ -1.58
PTP4A1-205ENST00000626021 LAPTM4AQ15012 233 aa5.19□□□□□ -1.58
PTP4A1-205ENST00000626021 TCP11L2Q8N4U5 519 aa5.19□□□□□ -1.58
PTP4A1-205ENST00000626021 ANP32BQ92688 251 aaKnown RBP5.19□□□□□ -1.58
PTP4A1-205ENST00000626021 CARD14Q9BXL6 1004 aa5.19□□□□□ -1.58
PTP4A1-205ENST00000626021 EVC2Q86UK5 1308 aa5.19□□□□□ -1.58
PTP4A1-205ENST00000626021 ADAMTS13Q76LX8 1427 aa5.19□□□□□ -1.58
PTP4A1-205ENST00000626021 RGL2O15211 777 aa5.19□□□□□ -1.58
PTP4A1-205ENST00000626021 CHGAP10645 457 aaKnown RBP5.19□□□□□ -1.58
PTP4A1-205ENST00000626021 MSNP26038 577 aaKnown RBP5.19□□□□□ -1.58
PTP4A1-205ENST00000626021 PDLIM2Q96JY6 352 aa5.19□□□□□ -1.58
PTP4A1-205ENST00000626021 IL16Q14005 1332 aa5.18□□□□□ -1.58
PTP4A1-205ENST00000626021 PLEKHG1Q9ULL1 1385 aa5.18□□□□□ -1.58
PTP4A1-205ENST00000626021 FBXO31Q5XUX0 539 aaPredicted RBP5.18□□□□□ -1.58
PTP4A1-205ENST00000626021 SPRYD3Q8NCJ5 442 aa5.18□□□□□ -1.58
PTP4A1-205ENST00000626021 NOL7Q9UMY1 257 aaKnown RBP5.18□□□□□ -1.58
PTP4A1-205ENST00000626021 TNNQ9UQP3 1299 aa5.18□□□□□ -1.58
PTP4A1-205ENST00000626021 PTCH1Q13635 1447 aa5.18□□□□□ -1.58
PTP4A1-205ENST00000626021 AK9Q5TCS8 1911 aa5.18□□□□□ -1.58
PTP4A1-205ENST00000626021 A0A1W2PP64 1363 aa5.18□□□□□ -1.58
PTP4A1-205ENST00000626021 TMEM2Q9UHN6 1383 aa5.18□□□□□ -1.58
PTP4A1-205ENST00000626021 A0A0G2JS52 829 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms