RNA–Protein interactions for RNA: ENST00000624931.1

PCF11-207, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

Gene PCF11, Length 1,720 nt, Biotype TEC, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-207ENST00000624931 KIAA0232Q92628 1395 aa22.47■■□□□ 1.19
PCF11-207ENST00000624931 PIP4K2BP78356 416 aa22.45■■□□□ 1.19
PCF11-207ENST00000624931 NBPF6Q5VWK0 638 aa22.45■■□□□ 1.19
PCF11-207ENST00000624931 ANKRD24Q8TF21 1146 aa22.45■■□□□ 1.19
PCF11-207ENST00000624931 NBPF4Q96M43 638 aa22.45■■□□□ 1.19
PCF11-207ENST00000624931 PHLPP1O60346 1717 aa22.44■■□□□ 1.18
PCF11-207ENST00000624931 THUMPD2Q9BTF0 503 aaKnown RBP22.43■■□□□ 1.18
PCF11-207ENST00000624931 CAMTA1Q9Y6Y1 1673 aa22.43■■□□□ 1.18
PCF11-207ENST00000624931 NCBP3Q53F19 620 aaKnown RBP22.43■■□□□ 1.18
PCF11-207ENST00000624931 COL16A1Q07092 1604 aaPredicted RBP22.42■■□□□ 1.18
PCF11-207ENST00000624931 CPDO75976 1380 aa22.42■■□□□ 1.18
PCF11-207ENST00000624931 WDR63Q8IWG1 891 aa22.42■■□□□ 1.18
PCF11-207ENST00000624931 HAP1P54257 671 aaPredicted RBP22.41■■□□□ 1.18
PCF11-207ENST00000624931 FAM83GA6ND36 823 aa22.4■■□□□ 1.18
PCF11-207ENST00000624931 UBAP1LF5GYI3 381 aa22.4■■□□□ 1.18
PCF11-207ENST00000624931 LMO7Q8WWI1 1683 aa22.4■■□□□ 1.18
PCF11-207ENST00000624931 ERBB3P21860 1342 aa22.4■■□□□ 1.18
PCF11-207ENST00000624931 TOM1O60784 492 aa22.4■■□□□ 1.18
PCF11-207ENST00000624931 ABCC6O95255 1503 aa22.39■■□□□ 1.17
PCF11-207ENST00000624931 VIRMAQ69YN4 1812 aaKnown RBP22.39■■□□□ 1.17
PCF11-207ENST00000624931 DCTN1Q14203 1278 aa22.38■■□□□ 1.17
PCF11-207ENST00000624931 MTHFSDQ2M296 383 aaKnown RBP22.38■■□□□ 1.17
PCF11-207ENST00000624931 PRDM11Q9NQV5 511 aa22.38■■□□□ 1.17
PCF11-207ENST00000624931 COL22A1Q8NFW1 1626 aaPredicted RBP22.37■■□□□ 1.17
PCF11-207ENST00000624931 SKAP1Q86WV1 359 aa22.37■■□□□ 1.17
PCF11-207ENST00000624931 NCAPD2Q15021 1401 aa22.37■■□□□ 1.17
PCF11-207ENST00000624931 BECN1Q14457 450 aa22.37■■□□□ 1.17
PCF11-207ENST00000624931 IL27Q8NEV9 243 aa22.37■■□□□ 1.17
PCF11-207ENST00000624931 TSR2Q969E8 191 aaKnown RBP22.37■■□□□ 1.17
PCF11-207ENST00000624931 FAM208AQ9UK61 1670 aaKnown RBP22.36■■□□□ 1.17
PCF11-207ENST00000624931 RGS3P49796 1198 aa22.34■■□□□ 1.17
PCF11-207ENST00000624931 CLUAP1Q96AJ1 413 aa22.34■■□□□ 1.17
PCF11-207ENST00000624931 CSB-PGBD3P0DP91 1061 aa22.33■■□□□ 1.17
PCF11-207ENST00000624931 MCM10Q7L590 875 aa22.33■■□□□ 1.17
PCF11-207ENST00000624931 NLRP2Q9NX02 1062 aa22.33■■□□□ 1.17
PCF11-207ENST00000624931 CERKQ8TCT0 537 aa22.32■■□□□ 1.16
PCF11-207ENST00000624931 IL16Q14005 1332 aa22.32■■□□□ 1.16
PCF11-207ENST00000624931 BCAR3O75815 825 aa22.31■■□□□ 1.16
PCF11-207ENST00000624931 LMOD3Q0VAK6 560 aa22.31■■□□□ 1.16
PCF11-207ENST00000624931 MYH16Q9H6N6 1097 aa22.31■■□□□ 1.16
PCF11-207ENST00000624931 FRAT1Q92837 279 aaPredicted RBP22.31■■□□□ 1.16
PCF11-207ENST00000624931 SLC4A3P48751 1232 aa22.3■■□□□ 1.16
PCF11-207ENST00000624931 GAS2L2Q8NHY3 880 aa22.3■■□□□ 1.16
PCF11-207ENST00000624931 COL5A2P05997 1499 aaPredicted RBP22.3■■□□□ 1.16
PCF11-207ENST00000624931 CANXP27824 592 aaKnown RBP22.29■■□□□ 1.16
PCF11-207ENST00000624931 MEGF6O75095 1541 aa22.28■■□□□ 1.16
PCF11-207ENST00000624931 IGHDP01880 384 aa22.27■■□□□ 1.16
PCF11-207ENST00000624931 EXOSC9Q06265 439 aaKnown RBP22.27■■□□□ 1.16
PCF11-207ENST00000624931 LRRC37A3O60309 1634 aa22.27■■□□□ 1.16
PCF11-207ENST00000624931 UPF2Q9HAU5 1272 aaKnown RBP22.26■■□□□ 1.15
PCF11-207ENST00000624931 MAP3K5Q99683 1374 aa22.26■■□□□ 1.15
PCF11-207ENST00000624931 CRB1P82279 1406 aa22.25■■□□□ 1.15
PCF11-207ENST00000624931 ZNF853P0CG23 659 aa22.25■■□□□ 1.15
PCF11-207ENST00000624931 STRN4Q9NRL3 753 aa22.25■■□□□ 1.15
PCF11-207ENST00000624931 COL14A1Q05707 1796 aaKnown RBP22.25■■□□□ 1.15
PCF11-207ENST00000624931 WDR17Q8IZU2 1322 aa22.24■■□□□ 1.15
PCF11-207ENST00000624931 MBIPQ9NS73 344 aa22.24■■□□□ 1.15
PCF11-207ENST00000624931 IFT57Q9NWB7 429 aa22.24■■□□□ 1.15
PCF11-207ENST00000624931 GNAT3A8MTJ3 354 aa22.23■■□□□ 1.15
PCF11-207ENST00000624931 CALD1Q05682 793 aaKnown RBP22.23■■□□□ 1.15
PCF11-207ENST00000624931 ZNF530Q6P9A1 599 aaPredicted RBP22.23■■□□□ 1.15
PCF11-207ENST00000624931 FRAT2O75474 233 aaPredicted RBP22.23■■□□□ 1.15
PCF11-207ENST00000624931 RTF1Q92541 710 aaKnown RBP22.23■■□□□ 1.15
PCF11-207ENST00000624931 NUTM2BA6NNL0 878 aaPredicted RBP22.22■■□□□ 1.15
PCF11-207ENST00000624931 NUTM2EB1AL46 878 aaPredicted RBP22.22■■□□□ 1.15
PCF11-207ENST00000624931 CT47B1P0C2W7 299 aaPredicted RBP22.22■■□□□ 1.15
PCF11-207ENST00000624931 GNAI1P63096 354 aa22.22■■□□□ 1.15
PCF11-207ENST00000624931 PLEKHO1Q53GL0 409 aaPredicted RBP22.22■■□□□ 1.15
PCF11-207ENST00000624931 LARP1Q6PKG0 1096 aaKnown RBP22.22■■□□□ 1.15
PCF11-207ENST00000624931 TOM1L2Q6ZVM7 507 aa22.22■■□□□ 1.15
PCF11-207ENST00000624931 NUTM2AQ8IVF1 878 aaPredicted RBP22.22■■□□□ 1.15
PCF11-207ENST00000624931 PLCH1Q4KWH8 1693 aa22.21■■□□□ 1.15
PCF11-207ENST00000624931 ADAMTS2O95450 1211 aa22.21■■□□□ 1.15
PCF11-207ENST00000624931 RARSP54136 660 aaKnown RBP22.21■■□□□ 1.15
PCF11-207ENST00000624931 RWDD1Q9H446 243 aaPredicted RBP22.21■■□□□ 1.15
PCF11-207ENST00000624931 BTG4Q9NY30 223 aa22.21■■□□□ 1.15
PCF11-207ENST00000624931 RAPGEF4Q8WZA2 1011 aa22.2■■□□□ 1.14
PCF11-207ENST00000624931 CFAP44Q96MT7 982 aa22.2■■□□□ 1.14
PCF11-207ENST00000624931 BCL2L13Q9BXK5 485 aa22.2■■□□□ 1.14
PCF11-207ENST00000624931 IL17REQ8NFR9 667 aa22.2■■□□□ 1.14
PCF11-207ENST00000624931 COG6Q9Y2V7 657 aa22.2■■□□□ 1.14
PCF11-207ENST00000624931 MIS18AQ9NYP9 233 aa22.19■■□□□ 1.14
PCF11-207ENST00000624931 TATP17735 454 aaPredicted RBP22.18■■□□□ 1.14
PCF11-207ENST00000624931 EVA1CP58658 441 aa22.18■■□□□ 1.14
PCF11-207ENST00000624931 PKD1L3Q7Z443 1732 aa22.18■■□□□ 1.14
PCF11-207ENST00000624931 AMOTQ4VCS5 1084 aa22.17■■□□□ 1.14
PCF11-207ENST00000624931 BRPF3Q9ULD4 1205 aa22.17■■□□□ 1.14
PCF11-207ENST00000624931 HTATSF1O43719 755 aaKnown RBP22.17■■□□□ 1.14
PCF11-207ENST00000624931 TSPYL6Q8N831 410 aa22.17■■□□□ 1.14
PCF11-207ENST00000624931 LGR6Q9HBX8 967 aa22.17■■□□□ 1.14
PCF11-207ENST00000624931 PARP4Q9UKK3 1724 aaKnown RBP22.16■■□□□ 1.14
PCF11-207ENST00000624931 AKAP4Q5JQC9 854 aa22.16■■□□□ 1.14
PCF11-207ENST00000624931 L1TD1Q5T7N2 865 aaKnown RBP22.16■■□□□ 1.14
PCF11-207ENST00000624931 FAM43AQ8N2R8 423 aa22.16■■□□□ 1.14
PCF11-207ENST00000624931 PANK1Q8TE04 598 aa22.16■■□□□ 1.14
PCF11-207ENST00000624931 CHL1O00533 1208 aa22.15■■□□□ 1.14
PCF11-207ENST00000624931 KRT24Q2M2I5 525 aa22.15■■□□□ 1.14
PCF11-207ENST00000624931 MPRIPQ6WCQ1 1025 aa22.15■■□□□ 1.14
PCF11-207ENST00000624931 OVOS2A0A0G2JMS6 1433 aa22.15■■□□□ 1.14
PCF11-207ENST00000624931 NRAPQ86VF7 1730 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms