RNA–Protein interactions for RNA: ENST00000624720.1

USB1-216, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

Gene USB1, Length 2,895 nt, Biotype TEC, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-216ENST00000624720 CARD14Q9BXL6 1004 aa11.21□□□□□ -0.61
USB1-216ENST00000624720 FER1L4A9Z1Z3 1794 aa11.21□□□□□ -0.62
USB1-216ENST00000624720 BRD1O95696 1058 aa11.21□□□□□ -0.62
USB1-216ENST00000624720 MS4A1P11836 297 aa11.21□□□□□ -0.62
USB1-216ENST00000624720 ATL2Q8NHH9 583 aa11.21□□□□□ -0.62
USB1-216ENST00000624720 MED4Q9NPJ6 270 aa11.21□□□□□ -0.62
USB1-216ENST00000624720 RIPOR2Q9Y4F9 1068 aa11.21□□□□□ -0.62
USB1-216ENST00000624720 PPP1R12AO14974 1030 aaPredicted RBP11.2□□□□□ -0.62
USB1-216ENST00000624720 GUCY2CP25092 1073 aa11.2□□□□□ -0.62
USB1-216ENST00000624720 CCT2P78371 535 aaKnown RBP11.2□□□□□ -0.62
USB1-216ENST00000624720 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.2□□□□□ -0.62
USB1-216ENST00000624720 PTPRMP28827 1452 aa11.2□□□□□ -0.62
USB1-216ENST00000624720 NEUROD2Q15784 382 aa11.2□□□□□ -0.62
USB1-216ENST00000624720 NOL10Q9BSC4 688 aaKnown RBP11.2□□□□□ -0.62
USB1-216ENST00000624720 GRPEL1Q9HAV7 217 aa11.2□□□□□ -0.62
USB1-216ENST00000624720 EIF3AQ14152 1382 aaKnown RBP11.2□□□□□ -0.62
USB1-216ENST00000624720 EIF2AK4Q9P2K8 1649 aaKnown RBP11.19□□□□□ -0.62
USB1-216ENST00000624720 GABPB1Q06547 395 aaPredicted RBP11.19□□□□□ -0.62
USB1-216ENST00000624720 MSL3Q8N5Y2 521 aaKnown RBP11.19□□□□□ -0.62
USB1-216ENST00000624720 RPS6KL1Q9Y6S9 549 aa11.19□□□□□ -0.62
USB1-216ENST00000624720 SYNMO15061 1565 aa11.19□□□□□ -0.62
USB1-216ENST00000624720 MYBBP1AQ9BQG0 1328 aaKnown RBP11.19□□□□□ -0.62
USB1-216ENST00000624720 KLHL33A6NCF5 533 aa11.19□□□□□ -0.62
USB1-216ENST00000624720 C1QTNF12Q5T7M4 302 aa11.19□□□□□ -0.62
USB1-216ENST00000624720 SASS6Q6UVJ0 657 aa11.19□□□□□ -0.62
USB1-216ENST00000624720 C1orf115Q9H7X2 142 aa11.19□□□□□ -0.62
USB1-216ENST00000624720 ISY1Q9ULR0 285 aaKnown RBP11.19□□□□□ -0.62
USB1-216ENST00000624720 SUFUQ9UMX1 484 aa11.19□□□□□ -0.62
USB1-216ENST00000624720 PNISRQ8TF01 805 aaKnown RBP11.18□□□□□ -0.62
USB1-216ENST00000624720 CAMSAP1Q5T5Y3 1602 aa11.18□□□□□ -0.62
USB1-216ENST00000624720 RIMS1Q86UR5 1692 aaKnown RBP11.18□□□□□ -0.62
USB1-216ENST00000624720 LTKP29376 864 aa11.18□□□□□ -0.62
USB1-216ENST00000624720 GGNBP2Q9H3C7 697 aa11.18□□□□□ -0.62
USB1-216ENST00000624720 PLEKHH1Q9ULM0 1364 aa11.17□□□□□ -0.62
USB1-216ENST00000624720 SPDYE4A6NLX3 237 aa11.17□□□□□ -0.62
USB1-216ENST00000624720 PROCA1Q8NCQ7 364 aaPredicted RBP11.17□□□□□ -0.62
USB1-216ENST00000624720 KDM4CQ9H3R0 1056 aa11.17□□□□□ -0.62
USB1-216ENST00000624720 IPO7O95373 1038 aaKnown RBP11.17□□□□□ -0.62
USB1-216ENST00000624720 NLRP13Q86W25 1043 aa11.17□□□□□ -0.62
USB1-216ENST00000624720 ERVK-7P63135 1459 aa11.16□□□□□ -0.62
USB1-216ENST00000624720 COQ9O75208 318 aa11.16□□□□□ -0.62
USB1-216ENST00000624720 PIK3C2GO75747 1445 aa11.16□□□□□ -0.62
USB1-216ENST00000624720 SSFA2P28290 1259 aa11.16□□□□□ -0.62
USB1-216ENST00000624720 CSPP1Q1MSJ5 1256 aa11.16□□□□□ -0.62
USB1-216ENST00000624720 SDR16C5Q8N3Y7 309 aa11.16□□□□□ -0.62
USB1-216ENST00000624720 TNPO1Q92973 898 aaKnown RBP11.16□□□□□ -0.62
USB1-216ENST00000624720 MKL1Q969V6 931 aa11.16□□□□□ -0.62
USB1-216ENST00000624720 TMX1Q9H3N1 280 aa11.16□□□□□ -0.62
USB1-216ENST00000624720 UPF2Q9HAU5 1272 aaKnown RBP11.16□□□□□ -0.62
USB1-216ENST00000624720 CABP1Q9NZU7 370 aa11.16□□□□□ -0.62
USB1-216ENST00000624720 ADAMTS8Q9UP79 889 aa11.16□□□□□ -0.62
USB1-216ENST00000624720 CLTCQ00610 1675 aaKnown RBP11.16□□□□□ -0.62
USB1-216ENST00000624720 LMTK2Q8IWU2 1503 aa11.16□□□□□ -0.62
USB1-216ENST00000624720 PPP2R1AP30153 589 aa11.15□□□□□ -0.62
USB1-216ENST00000624720 MORC1Q86VD1 984 aa11.15□□□□□ -0.62
USB1-216ENST00000624720 JMYQ8N9B5 988 aa11.15□□□□□ -0.62
USB1-216ENST00000624720 CDCA7LQ96GN5 454 aa11.15□□□□□ -0.62
USB1-216ENST00000624720 RPGRIP1LQ68CZ1 1315 aa11.15□□□□□ -0.62
USB1-216ENST00000624720 KIF1BO60333 1816 aa11.15□□□□□ -0.62
USB1-216ENST00000624720 ADGRB3O60242 1522 aa11.15□□□□□ -0.62
USB1-216ENST00000624720 CTAGE5O15320 804 aa11.15□□□□□ -0.62
USB1-216ENST00000624720 RBM5P52756 815 aaKnown RBP eCLIP11.15□□□□□ -0.62
USB1-216ENST00000624720 ZRSR2Q15696 482 aaKnown RBP11.15□□□□□ -0.62
USB1-216ENST00000624720 CDK19Q9BWU1 502 aa11.15□□□□□ -0.62
USB1-216ENST00000624720 TOMM22Q9NS69 142 aa11.15□□□□□ -0.62
USB1-216ENST00000624720 TNRQ92752 1358 aa11.15□□□□□ -0.62
USB1-216ENST00000624720 NINLQ9Y2I6 1382 aa11.15□□□□□ -0.62
USB1-216ENST00000624720 PAX7P23759 505 aa11.14□□□□□ -0.63
USB1-216ENST00000624720 BECN1Q14457 450 aa11.14□□□□□ -0.63
USB1-216ENST00000624720 NUCKS1Q9H1E3 243 aaKnown RBP11.14□□□□□ -0.63
USB1-216ENST00000624720 CXorf56Q9H5V9 222 aa11.14□□□□□ -0.63
USB1-216ENST00000624720 ANAPC4Q9UJX5 808 aa11.14□□□□□ -0.63
USB1-216ENST00000624720 RIMS2Q9UQ26 1411 aa11.14□□□□□ -0.63
USB1-216ENST00000624720 KIF3CO14782 793 aa11.14□□□□□ -0.63
USB1-216ENST00000624720 LIG1P18858 919 aa11.14□□□□□ -0.63
USB1-216ENST00000624720 WDR43Q15061 677 aaKnown RBP eCLIP11.14□□□□□ -0.63
USB1-216ENST00000624720 NME8Q8N427 588 aa11.14□□□□□ -0.63
USB1-216ENST00000624720 SMC3Q9UQE7 1217 aa11.14□□□□□ -0.63
USB1-216ENST00000624720 RRP7AQ9Y3A4 280 aaKnown RBP11.14□□□□□ -0.63
USB1-216ENST00000624720 METP08581 1390 aa11.14□□□□□ -0.63
USB1-216ENST00000624720 SF3A1Q15459 793 aaKnown RBP11.14□□□□□ -0.63
USB1-216ENST00000624720 FAM212AQ96EL1 285 aa11.14□□□□□ -0.63
USB1-216ENST00000624720 TRERF1Q96PN7 1200 aa11.14□□□□□ -0.63
USB1-216ENST00000624720 GZF1Q9H116 711 aaPredicted RBP11.14□□□□□ -0.63
USB1-216ENST00000624720 EVC2Q86UK5 1308 aa11.13□□□□□ -0.63
USB1-216ENST00000624720 TPM3P06753 285 aa11.13□□□□□ -0.63
USB1-216ENST00000624720 SPINK5Q9NQ38 1064 aaPredicted RBP11.13□□□□□ -0.63
USB1-216ENST00000624720 NUB1Q9Y5A7 615 aa11.13□□□□□ -0.63
USB1-216ENST00000624720 PREX1Q8TCU6 1659 aa11.12□□□□□ -0.63
USB1-216ENST00000624720 SUDS3Q9H7L9 328 aaPredicted RBP11.12□□□□□ -0.63
USB1-216ENST00000624720 ZRANB1Q9UGI0 708 aa11.12□□□□□ -0.63
USB1-216ENST00000624720 NSD3Q9BZ95 1437 aa11.12□□□□□ -0.63
USB1-216ENST00000624720 SLFN14P0C7P3 912 aa11.12□□□□□ -0.63
USB1-216ENST00000624720 GET4Q7L5D6 327 aaPredicted RBP11.12□□□□□ -0.63
USB1-216ENST00000624720 RASSF4Q9H2L5 321 aa11.12□□□□□ -0.63
USB1-216ENST00000624720 PPP2R5AQ15172 486 aa11.11□□□□□ -0.63
USB1-216ENST00000624720 NUTM2GQ5VZR2 741 aa11.11□□□□□ -0.63
USB1-216ENST00000624720 ZNF710Q8N1W2 664 aa11.11□□□□□ -0.63
USB1-216ENST00000624720 PIK3C2BO00750 1634 aa11.11□□□□□ -0.63
USB1-216ENST00000624720 H0YHG0 523 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms