RNA–Protein interactions for RNA: ENST00000623321.3

ATRX-211, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 1,860 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-211ENST00000623321 GAS2L2Q8NHY3 880 aa19.48■□□□□ 0.71
ATRX-211ENST00000623321 DLG5Q8TDM6 1919 aa19.47■□□□□ 0.71
ATRX-211ENST00000623321 RGPD2P0DJD1 1756 aa19.47■□□□□ 0.71
ATRX-211ENST00000623321 KDM2BQ8NHM5 1336 aa19.47■□□□□ 0.71
ATRX-211ENST00000623321 CERKQ8TCT0 537 aa19.46■□□□□ 0.71
ATRX-211ENST00000623321 PHLPP1O60346 1717 aa19.46■□□□□ 0.71
ATRX-211ENST00000623321 CAMTA1Q9Y6Y1 1673 aa19.45■□□□□ 0.7
ATRX-211ENST00000623321 COL22A1Q8NFW1 1626 aaPredicted RBP19.44■□□□□ 0.7
ATRX-211ENST00000623321 COL16A1Q07092 1604 aaPredicted RBP19.44■□□□□ 0.7
ATRX-211ENST00000623321 CSB-PGBD3P0DP91 1061 aa19.43■□□□□ 0.7
ATRX-211ENST00000623321 C20orf194Q5TEA3 1177 aa19.43■□□□□ 0.7
ATRX-211ENST00000623321 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.43■□□□□ 0.7
ATRX-211ENST00000623321 FAM83GA6ND36 823 aa19.43■□□□□ 0.7
ATRX-211ENST00000623321 THUMPD2Q9BTF0 503 aaKnown RBP19.43■□□□□ 0.7
ATRX-211ENST00000623321 NLRP2Q9NX02 1062 aa19.43■□□□□ 0.7
ATRX-211ENST00000623321 LMO7Q8WWI1 1683 aa19.43■□□□□ 0.7
ATRX-211ENST00000623321 HTATSF1O43719 755 aaKnown RBP19.42■□□□□ 0.7
ATRX-211ENST00000623321 FAM208AQ9UK61 1670 aaKnown RBP19.42■□□□□ 0.7
ATRX-211ENST00000623321 CENPQQ7L2Z9 268 aaPredicted RBP19.41■□□□□ 0.7
ATRX-211ENST00000623321 IFT57Q9NWB7 429 aa19.41■□□□□ 0.7
ATRX-211ENST00000623321 DEKP35659 375 aaKnown RBP19.41■□□□□ 0.7
ATRX-211ENST00000623321 DCTN1Q14203 1278 aa19.41■□□□□ 0.7
ATRX-211ENST00000623321 RTF1Q92541 710 aaKnown RBP19.41■□□□□ 0.7
ATRX-211ENST00000623321 GNAI1P63096 354 aa19.4■□□□□ 0.7
ATRX-211ENST00000623321 AMOTQ4VCS5 1084 aa19.4■□□□□ 0.7
ATRX-211ENST00000623321 PLEKHO1Q53GL0 409 aaPredicted RBP19.4■□□□□ 0.7
ATRX-211ENST00000623321 TSR2Q969E8 191 aaKnown RBP19.4■□□□□ 0.7
ATRX-211ENST00000623321 GNAT3A8MTJ3 354 aa19.39■□□□□ 0.7
ATRX-211ENST00000623321 ZNF853P0CG23 659 aa19.39■□□□□ 0.7
ATRX-211ENST00000623321 NBR1Q14596 966 aa19.39■□□□□ 0.7
ATRX-211ENST00000623321 WDR17Q8IZU2 1322 aa19.39■□□□□ 0.69
ATRX-211ENST00000623321 MCM10Q7L590 875 aa19.39■□□□□ 0.69
ATRX-211ENST00000623321 CFAP44Q96MT7 982 aa19.39■□□□□ 0.69
ATRX-211ENST00000623321 LAS1LQ9Y4W2 734 aaKnown RBP19.39■□□□□ 0.69
ATRX-211ENST00000623321 NPM2Q86SE8 214 aaKnown RBP19.38■□□□□ 0.69
ATRX-211ENST00000623321 COL5A2P05997 1499 aaPredicted RBP19.38■□□□□ 0.69
ATRX-211ENST00000623321 RAPGEF4Q8WZA2 1011 aa19.37■□□□□ 0.69
ATRX-211ENST00000623321 MAP3K5Q99683 1374 aa19.37■□□□□ 0.69
ATRX-211ENST00000623321 CT47B1P0C2W7 299 aaPredicted RBP19.37■□□□□ 0.69
ATRX-211ENST00000623321 EVA1CP58658 441 aa19.36■□□□□ 0.69
ATRX-211ENST00000623321 EXOSC9Q06265 439 aaKnown RBP19.36■□□□□ 0.69
ATRX-211ENST00000623321 TOM1L2Q6ZVM7 507 aa19.35■□□□□ 0.69
ATRX-211ENST00000623321 TATP17735 454 aaPredicted RBP19.35■□□□□ 0.69
ATRX-211ENST00000623321 PLEKHG2Q9H7P9 1386 aa19.35■□□□□ 0.69
ATRX-211ENST00000623321 CRB1P82279 1406 aa19.34■□□□□ 0.69
ATRX-211ENST00000623321 RTL5Q5HYW3 569 aaPredicted RBP19.34■□□□□ 0.69
ATRX-211ENST00000623321 AKAP4Q5JQC9 854 aa19.34■□□□□ 0.69
ATRX-211ENST00000623321 ZNF530Q6P9A1 599 aaPredicted RBP19.34■□□□□ 0.69
ATRX-211ENST00000623321 MBIPQ9NS73 344 aa19.34■□□□□ 0.69
ATRX-211ENST00000623321 COL14A1Q05707 1796 aaKnown RBP19.34■□□□□ 0.69
ATRX-211ENST00000623321 CHL1O00533 1208 aa19.33■□□□□ 0.69
ATRX-211ENST00000623321 DDRGK1Q96HY6 314 aa19.33■□□□□ 0.69
ATRX-211ENST00000623321 BTG4Q9NY30 223 aa19.33■□□□□ 0.69
ATRX-211ENST00000623321 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.33■□□□□ 0.691e-8■■■■□ 24.8
ATRX-211ENST00000623321 IL17REQ8NFR9 667 aa19.33■□□□□ 0.68
ATRX-211ENST00000623321 CARD10Q9BWT7 1032 aa19.33■□□□□ 0.68
ATRX-211ENST00000623321 STRN4Q9NRL3 753 aa19.33■□□□□ 0.68
ATRX-211ENST00000623321 C1orf141Q5JVX7 400 aa19.32■□□□□ 0.68
ATRX-211ENST00000623321 RARSP54136 660 aaKnown RBP19.31■□□□□ 0.68
ATRX-211ENST00000623321 LARP1Q6PKG0 1096 aaKnown RBP19.31■□□□□ 0.68
ATRX-211ENST00000623321 SPG7Q9UQ90 795 aa19.31■□□□□ 0.68
ATRX-211ENST00000623321 BCAR3O75815 825 aa19.31■□□□□ 0.68
ATRX-211ENST00000623321 SKAP1Q86WV1 359 aa19.31■□□□□ 0.68
ATRX-211ENST00000623321 MEGF6O75095 1541 aa19.3■□□□□ 0.68
ATRX-211ENST00000623321 CEMIPQ8WUJ3 1361 aa19.29■□□□□ 0.68
ATRX-211ENST00000623321 JCADQ9P266 1359 aa19.29■□□□□ 0.68
ATRX-211ENST00000623321 NUTM2BA6NNL0 878 aaPredicted RBP19.28■□□□□ 0.68
ATRX-211ENST00000623321 NUTM2EB1AL46 878 aaPredicted RBP19.28■□□□□ 0.68
ATRX-211ENST00000623321 ADAMTS2O95450 1211 aa19.28■□□□□ 0.68
ATRX-211ENST00000623321 NUTM2AQ8IVF1 878 aaPredicted RBP19.28■□□□□ 0.68
ATRX-211ENST00000623321 ZNF428Q96B54 188 aa19.28■□□□□ 0.68
ATRX-211ENST00000623321 LRRC37A3O60309 1634 aa19.28■□□□□ 0.68
ATRX-211ENST00000623321 BABAM1Q9NWV8 329 aa19.28■□□□□ 0.68
ATRX-211ENST00000623321 TAF7Q15545 349 aaPredicted RBP19.27■□□□□ 0.68
ATRX-211ENST00000623321 LGR6Q9HBX8 967 aa19.27■□□□□ 0.68
ATRX-211ENST00000623321 FAM161AQ3B820 660 aa19.26■□□□□ 0.67
ATRX-211ENST00000623321 USP35Q9P2H5 1018 aa19.26■□□□□ 0.67
ATRX-211ENST00000623321 TSPYL4Q9UJ04 414 aa19.26■□□□□ 0.67
ATRX-211ENST00000623321 VIRMAQ69YN4 1812 aaKnown RBP19.26■□□□□ 0.67
ATRX-211ENST00000623321 VAMP4O75379 141 aa19.26■□□□□ 0.67
ATRX-211ENST00000623321 MPRIPQ6WCQ1 1025 aa19.26■□□□□ 0.67
ATRX-211ENST00000623321 OVOS2A0A0G2JMS6 1433 aa19.26■□□□□ 0.67
ATRX-211ENST00000623321 RNMTO43148 476 aaKnown RBP19.25■□□□□ 0.67
ATRX-211ENST00000623321 IL2RBP14784 551 aa19.25■□□□□ 0.67
ATRX-211ENST00000623321 IFNL2Q8IZJ0 200 aa19.25■□□□□ 0.67
ATRX-211ENST00000623321 MIS18AQ9NYP9 233 aa19.25■□□□□ 0.67
ATRX-211ENST00000623321 PHKG2P15735 406 aa19.24■□□□□ 0.67
ATRX-211ENST00000623321 PDE3AQ14432 1141 aa19.24■□□□□ 0.67
ATRX-211ENST00000623321 TWISTNBQ3B726 338 aaPredicted RBP19.24■□□□□ 0.67
ATRX-211ENST00000623321 TSPYL6Q8N831 410 aa19.24■□□□□ 0.67
ATRX-211ENST00000623321 C8orf58Q8NAV2 365 aa19.24■□□□□ 0.67
ATRX-211ENST00000623321 PKD1L3Q7Z443 1732 aa19.24■□□□□ 0.67
ATRX-211ENST00000623321 PARP4Q9UKK3 1724 aaKnown RBP19.24■□□□□ 0.67
ATRX-211ENST00000623321 ALDH1L2Q3SY69 923 aa19.24■□□□□ 0.67
ATRX-211ENST00000623321 C8orf34Q49A92 452 aa19.24■□□□□ 0.67
ATRX-211ENST00000623321 ZCRB1Q8TBF4 217 aaKnown RBP19.23■□□□□ 0.67
ATRX-211ENST00000623321 SSH1Q8WYL5 1049 aa19.23■□□□□ 0.67
ATRX-211ENST00000623321 BCL2L13Q9BXK5 485 aa19.23■□□□□ 0.67
ATRX-211ENST00000623321 ELL2O00472 640 aaPredicted RBP19.22■□□□□ 0.67
ATRX-211ENST00000623321 TEFQ10587 303 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms