RNA–Protein interactions for RNA: ENST00000622973.1

CDHR1-204, Transcript of cadherin related family member 1, humanhuman

TSL 5

Gene CDHR1, Length 700 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR1-204ENST00000622973 EIF4A2Q14240 407 aaKnown RBP15.23■□□□□ 0.03
CDHR1-204ENST00000622973 RGPD3A6NKT7 1758 aaPredicted RBP15.23■□□□□ 0.03
CDHR1-204ENST00000622973 RGPD4Q7Z3J3 1758 aa15.23■□□□□ 0.03
CDHR1-204ENST00000622973 EP400Q96L91 3159 aa15.23■□□□□ 0.03
CDHR1-204ENST00000622973 MARCH10Q8NA82 808 aaPredicted RBP15.22■□□□□ 0.03
CDHR1-204ENST00000622973 EYA1Q99502 592 aa15.22■□□□□ 0.03
CDHR1-204ENST00000622973 SPG7Q9UQ90 795 aa15.22■□□□□ 0.03
CDHR1-204ENST00000622973 COL3A1P02461 1466 aaPredicted RBP15.21■□□□□ 0.03
CDHR1-204ENST00000622973 PCDH11XQ9BZA7 1347 aa15.21■□□□□ 0.03
CDHR1-204ENST00000622973 PCDH11YQ9BZA8 1340 aa15.21■□□□□ 0.03
CDHR1-204ENST00000622973 MEGF6O75095 1541 aa15.21■□□□□ 0.03
CDHR1-204ENST00000622973 DIAPH1O60610 1272 aaKnown RBP15.2■□□□□ 0.02
CDHR1-204ENST00000622973 HMGB2P26583 209 aaKnown RBP15.2■□□□□ 0.02
CDHR1-204ENST00000622973 IL13P35225 146 aa15.2■□□□□ 0.02
CDHR1-204ENST00000622973 BCL11BQ9C0K0 894 aaPredicted RBP15.2■□□□□ 0.02
CDHR1-204ENST00000622973 SBF2Q86WG5 1849 aa15.2■□□□□ 0.02
CDHR1-204ENST00000622973 DDX10Q13206 875 aaKnown RBP15.19■□□□□ 0.02
CDHR1-204ENST00000622973 AMOTQ4VCS5 1084 aa15.19■□□□□ 0.02
CDHR1-204ENST00000622973 DEFB132Q7Z7B7 95 aa15.19■□□□□ 0.02
CDHR1-204ENST00000622973 SHANK3Q9BYB0 1731 aa15.19■□□□□ 0.02
CDHR1-204ENST00000622973 TNS1Q9HBL0 1735 aaKnown RBP15.19■□□□□ 0.02
CDHR1-204ENST00000622973 PPP2R1AP30153 589 aa15.18■□□□□ 0.02
CDHR1-204ENST00000622973 EN1Q05925 392 aaPredicted RBP15.18■□□□□ 0.02
CDHR1-204ENST00000622973 NUDCQ9Y266 331 aa15.18■□□□□ 0.02
CDHR1-204ENST00000622973 NHSQ6T4R5 1651 aa15.18■□□□□ 0.02
CDHR1-204ENST00000622973 SYTL4Q96C24 671 aaPredicted RBP15.17■□□□□ 0.02
CDHR1-204ENST00000622973 ACSBG1Q96GR2 724 aa15.17■□□□□ 0.02
CDHR1-204ENST00000622973 PLEKHO1Q53GL0 409 aaPredicted RBP15.16■□□□□ 0.02
CDHR1-204ENST00000622973 NBPF14Q5TI25 921 aa15.16■□□□□ 0.02
CDHR1-204ENST00000622973 MYBBP1AQ9BQG0 1328 aaKnown RBP15.16■□□□□ 0.02
CDHR1-204ENST00000622973 HSP90AB1P08238 724 aaKnown RBP15.15■□□□□ 0.02
CDHR1-204ENST00000622973 NKX1-1Q15270 411 aaPredicted RBP15.15■□□□□ 0.02
CDHR1-204ENST00000622973 U2SURPO15042 1029 aaKnown RBP15.14■□□□□ 0.01
CDHR1-204ENST00000622973 PLSCR1O15162 318 aa15.14■□□□□ 0.01
CDHR1-204ENST00000622973 EZH2Q15910 746 aaKnown RBP15.14■□□□□ 0.01
CDHR1-204ENST00000622973 SULT6B1Q6IMI4 303 aa15.14■□□□□ 0.01
CDHR1-204ENST00000622973 C1orf141Q5JVX7 400 aa15.13■□□□□ 0.01
CDHR1-204ENST00000622973 IFNL2Q8IZJ0 200 aa15.13■□□□□ 0.01
CDHR1-204ENST00000622973 PNNQ9H307 717 aaKnown RBP15.13■□□□□ 0.01
CDHR1-204ENST00000622973 NEFMP07197 916 aa15.12■□□□□ 0.01
CDHR1-204ENST00000622973 PRKRIP1Q9H875 184 aaPredicted RBP15.12■□□□□ 0.01
CDHR1-204ENST00000622973 FCHSD2O94868 740 aa15.11■□□□□ 0.01
CDHR1-204ENST00000622973 CAMKK2Q96RR4 588 aa15.11■□□□□ 0.01
CDHR1-204ENST00000622973 KAT6BQ8WYB5 2073 aa15.11■□□□□ 0.01
CDHR1-204ENST00000622973 KCNQ2O43526 872 aa15.1■□□□□ 0.01
CDHR1-204ENST00000622973 PRIM1P49642 420 aaKnown RBP15.1■□□□□ 0.01
CDHR1-204ENST00000622973 RREB1Q92766 1687 aa15.09■□□□□ 0.01
CDHR1-204ENST00000622973 DOT1LQ8TEK3 1739 aa15.09■□□□□ 0.01
CDHR1-204ENST00000622973 ZNF530Q6P9A1 599 aaPredicted RBP15.09■□□□□ 0.01
CDHR1-204ENST00000622973 DCAF5Q96JK2 942 aa15.09■□□□□ 0.01
CDHR1-204ENST00000622973 CYP27B1O15528 508 aa15.08■□□□□ 0
CDHR1-204ENST00000622973 HMOX1P09601 288 aa15.08■□□□□ 0
CDHR1-204ENST00000622973 PHKG2P15735 406 aa15.08■□□□□ 0
CDHR1-204ENST00000622973 ADAMTS7Q9UKP4 1686 aa15.07■□□□□ 0
CDHR1-204ENST00000622973 ERVV-2B6SEH9 535 aa15.07■□□□□ 0
CDHR1-204ENST00000622973 MPRIPQ6WCQ1 1025 aa15.07■□□□□ 0
CDHR1-204ENST00000622973 GAS2L2Q8NHY3 880 aa15.07■□□□□ 0
CDHR1-204ENST00000622973 BTAF1O14981 1849 aa15.06■□□□□ 0
CDHR1-204ENST00000622973 U2AF1L5P0DN76 240 aaPredicted RBP15.06■□□□□ 0
CDHR1-204ENST00000622973 U2AF1Q01081 240 aaKnown RBP eCLIP15.06■□□□□ 0
CDHR1-204ENST00000622973 AKAP4Q5JQC9 854 aa15.06■□□□□ 0
CDHR1-204ENST00000622973 AEBP1Q8IUX7 1158 aa15.06■□□□□ 0
CDHR1-204ENST00000622973 SMARCC1Q92922 1105 aaPredicted RBP15.06■□□□□ 0
CDHR1-204ENST00000622973 TMOD3Q9NYL9 352 aa15.06■□□□□ 0
CDHR1-204ENST00000622973 TXNRD1Q16881 649 aa15.05■□□□□ -0
CDHR1-204ENST00000622973 STK32BQ9NY57 414 aa15.05■□□□□ -0
CDHR1-204ENST00000622973 ZNF831Q5JPB2 1677 aa15.05■□□□□ -0
CDHR1-204ENST00000622973 MRC1P22897 1456 aa15.04■□□□□ -0
CDHR1-204ENST00000622973 SLC27A3Q5K4L6 730 aa15.04■□□□□ -0
CDHR1-204ENST00000622973 RSPH6AQ9H0K4 717 aa15.04■□□□□ -0
CDHR1-204ENST00000622973 ITGB4P16144 1822 aa15.03■□□□□ -0
CDHR1-204ENST00000622973 SCN11AQ9UI33 1791 aa15.03■□□□□ -0
CDHR1-204ENST00000622973 LY75O60449 1722 aa15.03■□□□□ -0
CDHR1-204ENST00000622973 TOGARAM1Q9Y4F4 1720 aa15.03■□□□□ -0
CDHR1-204ENST00000622973 ANP32CO43423 234 aa15.03■□□□□ -0
CDHR1-204ENST00000622973 HTATSF1O43719 755 aaKnown RBP15.03■□□□□ -0
CDHR1-204ENST00000622973 CABP4P57796 275 aa15.03■□□□□ -0
CDHR1-204ENST00000622973 PTF1AQ7RTS3 328 aa15.03■□□□□ -0
CDHR1-204ENST00000622973 R3HDM1Q15032 1099 aaKnown RBP15.02■□□□□ -0
CDHR1-204ENST00000622973 NUP188Q5SRE5 1749 aa15.01□□□□□ -0.01
CDHR1-204ENST00000622973 PSDA5PKW4 1024 aaPredicted RBP15.01□□□□□ -0.01
CDHR1-204ENST00000622973 MAP3K5Q99683 1374 aa15□□□□□ -0.01
CDHR1-204ENST00000622973 CICQ96RK0 1608 aaPredicted RBP15□□□□□ -0.01
CDHR1-204ENST00000622973 CCNL1Q9UK58 526 aaPredicted RBP15□□□□□ -0.01
CDHR1-204ENST00000622973 KDM6AO15550 1401 aaPredicted RBP15□□□□□ -0.01
CDHR1-204ENST00000622973 GNAT3A8MTJ3 354 aa14.99□□□□□ -0.01
CDHR1-204ENST00000622973 PRKAR2BP31323 418 aa14.99□□□□□ -0.01
CDHR1-204ENST00000622973 WDR43Q15061 677 aaKnown RBP eCLIP14.99□□□□□ -0.01
CDHR1-204ENST00000622973 RTF1Q92541 710 aaKnown RBP14.99□□□□□ -0.01
CDHR1-204ENST00000622973 CEMIPQ8WUJ3 1361 aa14.98□□□□□ -0.01
CDHR1-204ENST00000622973 MTHFSDQ2M296 383 aaKnown RBP14.98□□□□□ -0.01
CDHR1-204ENST00000622973 PIGBQ92521 554 aa14.98□□□□□ -0.01
CDHR1-204ENST00000622973 PALLDQ8WX93 1383 aa14.98□□□□□ -0.01
CDHR1-204ENST00000622973 MAPK8IP3Q9UPT6 1336 aa14.97□□□□□ -0.01
CDHR1-204ENST00000622973 VIRMAQ69YN4 1812 aaKnown RBP14.97□□□□□ -0.01
CDHR1-204ENST00000622973 PAPPAQ13219 1627 aa14.97□□□□□ -0.01
CDHR1-204ENST00000622973 SLC15A2Q16348 729 aa14.97□□□□□ -0.01
CDHR1-204ENST00000622973 PROM2Q8N271 834 aa14.97□□□□□ -0.01
CDHR1-204ENST00000622973 PLEKHF1Q96S99 279 aa14.97□□□□□ -0.01
CDHR1-204ENST00000622973 QSER1Q2KHR3 1735 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms