RNA–Protein interactions for RNA: ENST00000622836.1

PCDHGC3-208, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-208ENST00000622836 EZH2Q15910 746 aaKnown RBP18.91■□□□□ 0.62
PCDHGC3-208ENST00000622836 KAT6BQ8WYB5 2073 aa18.91■□□□□ 0.62
PCDHGC3-208ENST00000622836 SBF2Q86WG5 1849 aa18.9■□□□□ 0.62
PCDHGC3-208ENST00000622836 PTF1AQ7RTS3 328 aa18.89■□□□□ 0.61
PCDHGC3-208ENST00000622836 CAMKK2Q96RR4 588 aa18.89■□□□□ 0.61
PCDHGC3-208ENST00000622836 PCDH11XQ9BZA7 1347 aa18.89■□□□□ 0.61
PCDHGC3-208ENST00000622836 PCDH11YQ9BZA8 1340 aa18.89■□□□□ 0.61
PCDHGC3-208ENST00000622836 KCNQ2O43526 872 aa18.88■□□□□ 0.61
PCDHGC3-208ENST00000622836 SYTL4Q96C24 671 aaPredicted RBP18.88■□□□□ 0.61
PCDHGC3-208ENST00000622836 SPG7Q9UQ90 795 aa18.88■□□□□ 0.61
PCDHGC3-208ENST00000622836 IGSF1Q8N6C5 1336 aa18.88■□□□□ 0.61
PCDHGC3-208ENST00000622836 PARD3Q8TEW0 1356 aa18.88■□□□□ 0.61
PCDHGC3-208ENST00000622836 NCAPD2Q15021 1401 aa18.87■□□□□ 0.61
PCDHGC3-208ENST00000622836 IL13P35225 146 aa18.85■□□□□ 0.61
PCDHGC3-208ENST00000622836 DDX10Q13206 875 aaKnown RBP18.85■□□□□ 0.61
PCDHGC3-208ENST00000622836 NHSQ6T4R5 1651 aa18.85■□□□□ 0.61
PCDHGC3-208ENST00000622836 SHANK3Q9BYB0 1731 aa18.84■□□□□ 0.61
PCDHGC3-208ENST00000622836 PLSCR1O15162 318 aa18.84■□□□□ 0.61
PCDHGC3-208ENST00000622836 DIAPH1O60610 1272 aaKnown RBP18.84■□□□□ 0.61
PCDHGC3-208ENST00000622836 SULT6B1Q6IMI4 303 aa18.84■□□□□ 0.61
PCDHGC3-208ENST00000622836 CFAP53Q96M91 514 aa18.83■□□□□ 0.6
PCDHGC3-208ENST00000622836 CYP27B1O15528 508 aa18.82■□□□□ 0.6
PCDHGC3-208ENST00000622836 PRIM1P49642 420 aaKnown RBP18.82■□□□□ 0.6
PCDHGC3-208ENST00000622836 AEBP1Q8IUX7 1158 aa18.82■□□□□ 0.6
PCDHGC3-208ENST00000622836 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.82■□□□□ 0.6
PCDHGC3-208ENST00000622836 PKD1L3Q7Z443 1732 aa18.81■□□□□ 0.6
PCDHGC3-208ENST00000622836 DOT1LQ8TEK3 1739 aa18.81■□□□□ 0.6
PCDHGC3-208ENST00000622836 PLEKHO1Q53GL0 409 aaPredicted RBP18.81■□□□□ 0.6
PCDHGC3-208ENST00000622836 NBPF14Q5TI25 921 aa18.81■□□□□ 0.6
PCDHGC3-208ENST00000622836 PSDA5PKW4 1024 aaPredicted RBP18.8■□□□□ 0.6
PCDHGC3-208ENST00000622836 U2SURPO15042 1029 aaKnown RBP18.8■□□□□ 0.6
PCDHGC3-208ENST00000622836 PPP2R1AP30153 589 aa18.8■□□□□ 0.6
PCDHGC3-208ENST00000622836 IFNL2Q8IZJ0 200 aa18.8■□□□□ 0.6
PCDHGC3-208ENST00000622836 RGPD3A6NKT7 1758 aaPredicted RBP18.79■□□□□ 0.6
PCDHGC3-208ENST00000622836 RGPD4Q7Z3J3 1758 aa18.79■□□□□ 0.6
PCDHGC3-208ENST00000622836 HMOX1P09601 288 aa18.79■□□□□ 0.6
PCDHGC3-208ENST00000622836 AMOTQ4VCS5 1084 aa18.79■□□□□ 0.6
PCDHGC3-208ENST00000622836 PLEKHG2Q9H7P9 1386 aa18.79■□□□□ 0.6
PCDHGC3-208ENST00000622836 RREB1Q92766 1687 aa18.79■□□□□ 0.6
PCDHGC3-208ENST00000622836 BTAF1O14981 1849 aa18.79■□□□□ 0.6
PCDHGC3-208ENST00000622836 R3HDM1Q15032 1099 aaKnown RBP18.78■□□□□ 0.6
PCDHGC3-208ENST00000622836 TXNRD1Q16881 649 aa18.78■□□□□ 0.6
PCDHGC3-208ENST00000622836 PHKG2P15735 406 aa18.77■□□□□ 0.6
PCDHGC3-208ENST00000622836 ZNF530Q6P9A1 599 aaPredicted RBP18.77■□□□□ 0.6
PCDHGC3-208ENST00000622836 NUP188Q5SRE5 1749 aa18.77■□□□□ 0.59
PCDHGC3-208ENST00000622836 C1orf141Q5JVX7 400 aa18.76■□□□□ 0.59
PCDHGC3-208ENST00000622836 MPRIPQ6WCQ1 1025 aa18.76■□□□□ 0.59
PCDHGC3-208ENST00000622836 NUDCQ9Y266 331 aa18.76■□□□□ 0.59
PCDHGC3-208ENST00000622836 KDRP35968 1356 aa18.76■□□□□ 0.59
PCDHGC3-208ENST00000622836 NKX1-1Q15270 411 aaPredicted RBP18.75■□□□□ 0.59
PCDHGC3-208ENST00000622836 PROM2Q8N271 834 aa18.75■□□□□ 0.59
PCDHGC3-208ENST00000622836 COL3A1P02461 1466 aaPredicted RBP18.75■□□□□ 0.59
PCDHGC3-208ENST00000622836 HSP90AB1P08238 724 aaKnown RBP18.74■□□□□ 0.59
PCDHGC3-208ENST00000622836 RALBP1Q15311 655 aa18.72■□□□□ 0.59
PCDHGC3-208ENST00000622836 TMOD3Q9NYL9 352 aa18.72■□□□□ 0.59
PCDHGC3-208ENST00000622836 DCAF5Q96JK2 942 aa18.71■□□□□ 0.59
PCDHGC3-208ENST00000622836 STK32BQ9NY57 414 aa18.71■□□□□ 0.59
PCDHGC3-208ENST00000622836 U2AF1L5P0DN76 240 aaPredicted RBP18.7■□□□□ 0.58
PCDHGC3-208ENST00000622836 U2AF1Q01081 240 aaKnown RBP eCLIP18.7■□□□□ 0.58
PCDHGC3-208ENST00000622836 SLC27A3Q5K4L6 730 aa18.7■□□□□ 0.58
PCDHGC3-208ENST00000622836 ANO8Q9HCE9 1232 aaPredicted RBP18.7■□□□□ 0.58
PCDHGC3-208ENST00000622836 TOGARAM1Q9Y4F4 1720 aa18.7■□□□□ 0.58
PCDHGC3-208ENST00000622836 PIGBQ92521 554 aa18.69■□□□□ 0.58
PCDHGC3-208ENST00000622836 CCNL1Q9UK58 526 aaPredicted RBP18.69■□□□□ 0.58
PCDHGC3-208ENST00000622836 ITGB4P16144 1822 aa18.68■□□□□ 0.58
PCDHGC3-208ENST00000622836 ZNF316A6NFI3 1004 aaPredicted RBP18.68■□□□□ 0.58
PCDHGC3-208ENST00000622836 SMARCC1Q92922 1105 aaPredicted RBP18.68■□□□□ 0.58
PCDHGC3-208ENST00000622836 PALLDQ8WX93 1383 aa18.68■□□□□ 0.58
PCDHGC3-208ENST00000622836 ERVV-2B6SEH9 535 aa18.67■□□□□ 0.58
PCDHGC3-208ENST00000622836 KCNQ4P56696 695 aa18.67■□□□□ 0.58
PCDHGC3-208ENST00000622836 CABP4P57796 275 aa18.67■□□□□ 0.58
PCDHGC3-208ENST00000622836 AKAP4Q5JQC9 854 aa18.67■□□□□ 0.58
PCDHGC3-208ENST00000622836 LRRC4BQ9NT99 713 aa18.67■□□□□ 0.58
PCDHGC3-208ENST00000622836 PRKAR2BP31323 418 aa18.66■□□□□ 0.58
PCDHGC3-208ENST00000622836 SLC15A2Q16348 729 aa18.66■□□□□ 0.58
PCDHGC3-208ENST00000622836 MTHFSDQ2M296 383 aaKnown RBP18.66■□□□□ 0.58
PCDHGC3-208ENST00000622836 KDM6AO15550 1401 aaPredicted RBP18.65■□□□□ 0.58
PCDHGC3-208ENST00000622836 GAS2L2Q8NHY3 880 aa18.64■□□□□ 0.57
PCDHGC3-208ENST00000622836 MYBBP1AQ9BQG0 1328 aaKnown RBP18.64■□□□□ 0.57
PCDHGC3-208ENST00000622836 LY75O60449 1722 aa18.63■□□□□ 0.57
PCDHGC3-208ENST00000622836 RSPH6AQ9H0K4 717 aa18.63■□□□□ 0.57
PCDHGC3-208ENST00000622836 ASAP1Q9ULH1 1129 aa18.63■□□□□ 0.57
PCDHGC3-208ENST00000622836 FCHSD2O94868 740 aa18.62■□□□□ 0.57
PCDHGC3-208ENST00000622836 NEFMP07197 916 aa18.62■□□□□ 0.57
PCDHGC3-208ENST00000622836 HMGB2P26583 209 aaKnown RBP18.62■□□□□ 0.57
PCDHGC3-208ENST00000622836 ZNF827Q17R98 1081 aa18.61■□□□□ 0.57
PCDHGC3-208ENST00000622836 NFATC2IPQ8NCF5 419 aa18.61■□□□□ 0.57
PCDHGC3-208ENST00000622836 ATG3Q9NT62 314 aa18.61■□□□□ 0.57
PCDHGC3-208ENST00000622836 SRCAPQ6ZRS2 3230 aa18.61■□□□□ 0.57
PCDHGC3-208ENST00000622836 PAPPAQ13219 1627 aa18.6■□□□□ 0.57
PCDHGC3-208ENST00000622836 RNMTO43148 476 aaKnown RBP18.6■□□□□ 0.57
PCDHGC3-208ENST00000622836 LGR6Q9HBX8 967 aa18.6■□□□□ 0.57
PCDHGC3-208ENST00000622836 TFCP2L1Q9NZI6 479 aa18.6■□□□□ 0.57
PCDHGC3-208ENST00000622836 MAP3K5Q99683 1374 aa18.59■□□□□ 0.57
PCDHGC3-208ENST00000622836 LOC102724428A0A0B4J2F2 783 aa18.59■□□□□ 0.57
PCDHGC3-208ENST00000622836 GNAT3A8MTJ3 354 aa18.59■□□□□ 0.57
PCDHGC3-208ENST00000622836 SIK1P57059 783 aa18.59■□□□□ 0.57
PCDHGC3-208ENST00000622836 PHACTR3Q96KR7 559 aa18.59■□□□□ 0.57
PCDHGC3-208ENST00000622836 RBM42Q9BTD8 480 aaKnown RBP18.59■□□□□ 0.57
PCDHGC3-208ENST00000622836 PRKRIP1Q9H875 184 aaPredicted RBP18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms