RNA–Protein interactions for RNA: ENST00000622179.4

SIRPA-204, Transcript of signal regulatory protein alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SIRPA, Length 4,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-204ENST00000622179 FSD1Q9BTV5 496 aa16.07■□□□□ 0.16
SIRPA-204ENST00000622179 KDM5AP29375 1690 aaKnown RBP16.07■□□□□ 0.16
SIRPA-204ENST00000622179 PHF14O94880 888 aa16.06■□□□□ 0.16
SIRPA-204ENST00000622179 C16orf71Q8IYS4 520 aaPredicted RBP16.06■□□□□ 0.16
SIRPA-204ENST00000622179 CROCC2H7BZ55 1655 aa16.06■□□□□ 0.16
SIRPA-204ENST00000622179 H3BQV1 296 aa16.06■□□□□ 0.16
SIRPA-204ENST00000622179 IFFO2Q5TF58 517 aa16.06■□□□□ 0.16
SIRPA-204ENST00000622179 ANXA1P04083 346 aa16.06■□□□□ 0.16
SIRPA-204ENST00000622179 TATP17735 454 aaPredicted RBP16.06■□□□□ 0.16
SIRPA-204ENST00000622179 FAM184AQ8NB25 1140 aa16.05■□□□□ 0.16
SIRPA-204ENST00000622179 ZFYVE16Q7Z3T8 1539 aa16.05■□□□□ 0.16
SIRPA-204ENST00000622179 MX1P20591 662 aa16.05■□□□□ 0.16
SIRPA-204ENST00000622179 IL13P35225 146 aa16.05■□□□□ 0.16
SIRPA-204ENST00000622179 MTHFSDQ2M296 383 aaKnown RBP16.05■□□□□ 0.16
SIRPA-204ENST00000622179 RNF214Q8ND24 703 aa16.05■□□□□ 0.16
SIRPA-204ENST00000622179 PTPRCP08575 1304 aa16.04■□□□□ 0.16
SIRPA-204ENST00000622179 RNF20Q5VTR2 975 aa16.04■□□□□ 0.16
SIRPA-204ENST00000622179 SMC5Q8IY18 1101 aa16.04■□□□□ 0.16
SIRPA-204ENST00000622179 UPF3BQ9BZI7 483 aaKnown RBP16.04■□□□□ 0.16
SIRPA-204ENST00000622179 IQGAP3Q86VI3 1631 aa16.04■□□□□ 0.16
SIRPA-204ENST00000622179 HTATSF1O43719 755 aaKnown RBP16.04■□□□□ 0.16
SIRPA-204ENST00000622179 TRPM1Q7Z4N2 1603 aa16.04■□□□□ 0.16
SIRPA-204ENST00000622179 CWC27Q6UX04 472 aaKnown RBP16.04■□□□□ 0.16
SIRPA-204ENST00000622179 KCNH5Q8NCM2 988 aa16.04■□□□□ 0.16
SIRPA-204ENST00000622179 TOMM22Q9NS69 142 aa16.03■□□□□ 0.16
SIRPA-204ENST00000622179 ARID3AQ99856 593 aa16.03■□□□□ 0.16
SIRPA-204ENST00000622179 PLXNC1O60486 1568 aa16.03■□□□□ 0.16
SIRPA-204ENST00000622179 NASPP49321 788 aaPredicted RBP16.03■□□□□ 0.16
SIRPA-204ENST00000622179 DNAJC2Q99543 621 aaKnown RBP16.02■□□□□ 0.16
SIRPA-204ENST00000622179 RBM42Q9BTD8 480 aaKnown RBP16.02■□□□□ 0.16
SIRPA-204ENST00000622179 ZBTB7BO15156 539 aaPredicted RBP16.02■□□□□ 0.15
SIRPA-204ENST00000622179 STRN4Q9NRL3 753 aa16.02■□□□□ 0.15
SIRPA-204ENST00000622179 FOSBP53539 338 aa16.02■□□□□ 0.15
SIRPA-204ENST00000622179 CIZ1Q9ULV3 898 aaPredicted RBP16.02■□□□□ 0.15
SIRPA-204ENST00000622179 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.01■□□□□ 0.15
SIRPA-204ENST00000622179 SYNMO15061 1565 aa16.01■□□□□ 0.15
SIRPA-204ENST00000622179 ZFYVE9O95405 1425 aa16.01■□□□□ 0.15
SIRPA-204ENST00000622179 AACSQ86V21 672 aa16.01■□□□□ 0.15
SIRPA-204ENST00000622179 MCM2P49736 904 aa16.01■□□□□ 0.15
SIRPA-204ENST00000622179 MAP3K19Q56UN5 1328 aa16.01■□□□□ 0.15
SIRPA-204ENST00000622179 MYOM2P54296 1465 aa16.01■□□□□ 0.15
SIRPA-204ENST00000622179 DDX54Q8TDD1 881 aaKnown RBP16.01■□□□□ 0.15
SIRPA-204ENST00000622179 EYA1Q99502 592 aa16.01■□□□□ 0.15
SIRPA-204ENST00000622179 TNPO1Q92973 898 aaKnown RBP16■□□□□ 0.15
SIRPA-204ENST00000622179 TTC22Q5TAA0 569 aa16■□□□□ 0.15
SIRPA-204ENST00000622179 SSFA2P28290 1259 aa16■□□□□ 0.15
SIRPA-204ENST00000622179 CABP4P57796 275 aa16■□□□□ 0.15
SIRPA-204ENST00000622179 CHAF1AQ13111 956 aaPredicted RBP16■□□□□ 0.15
SIRPA-204ENST00000622179 ANKRD44Q8N8A2 993 aa16■□□□□ 0.15
SIRPA-204ENST00000622179 CWC22Q9HCG8 908 aaKnown RBP15.99■□□□□ 0.15
SIRPA-204ENST00000622179 NEO1Q92859 1461 aa15.99■□□□□ 0.15
SIRPA-204ENST00000622179 GOLGA6L6A8MZA4 724 aa15.99■□□□□ 0.15
SIRPA-204ENST00000622179 SDSP20132 328 aa15.99■□□□□ 0.15
SIRPA-204ENST00000622179 UNC13BO14795 1591 aa15.99■□□□□ 0.15
SIRPA-204ENST00000622179 CLTCL1P53675 1640 aa15.99■□□□□ 0.15
SIRPA-204ENST00000622179 PI4KAP2A4QPH2 592 aa15.99■□□□□ 0.15
SIRPA-204ENST00000622179 SF3A1Q15459 793 aaKnown RBP15.99■□□□□ 0.15
SIRPA-204ENST00000622179 ERC1Q8IUD2 1116 aa15.99■□□□□ 0.15
SIRPA-204ENST00000622179 PI4KAP1Q8N8J0 262 aa15.99■□□□□ 0.15
SIRPA-204ENST00000622179 DNAAF4Q8WXU2 420 aa15.99■□□□□ 0.15
SIRPA-204ENST00000622179 GRPEL1Q9HAV7 217 aa15.98■□□□□ 0.15
SIRPA-204ENST00000622179 TTC21AQ8NDW8 1320 aa15.98■□□□□ 0.15
SIRPA-204ENST00000622179 KCNA6P17658 529 aa15.98■□□□□ 0.15
SIRPA-204ENST00000622179 GTF2E1P29083 439 aaPredicted RBP15.98■□□□□ 0.15
SIRPA-204ENST00000622179 TOM1L2Q6ZVM7 507 aa15.98■□□□□ 0.15
SIRPA-204ENST00000622179 KIF1BPQ96EK5 621 aa15.98■□□□□ 0.15
SIRPA-204ENST00000622179 PLEKHF1Q96S99 279 aa15.98■□□□□ 0.15
SIRPA-204ENST00000622179 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.98■□□□□ 0.15
SIRPA-204ENST00000622179 SPG7Q9UQ90 795 aa15.98■□□□□ 0.15
SIRPA-204ENST00000622179 KIF3AQ9Y496 699 aa15.98■□□□□ 0.15
SIRPA-204ENST00000622179 APPP05067 770 aa15.97■□□□□ 0.15
SIRPA-204ENST00000622179 MLH3Q9UHC1 1453 aa15.97■□□□□ 0.15
SIRPA-204ENST00000622179 FIBPO43427 364 aa15.97■□□□□ 0.15
SIRPA-204ENST00000622179 G2E3Q7L622 706 aa15.96■□□□□ 0.15
SIRPA-204ENST00000622179 PPP1R42Q7Z4L9 355 aa15.96■□□□□ 0.15
SIRPA-204ENST00000622179 EDC4Q6P2E9 1401 aaKnown RBP15.96■□□□□ 0.15
SIRPA-204ENST00000622179 WASHC4Q2M389 1173 aa15.96■□□□□ 0.15
SIRPA-204ENST00000622179 PRDM11Q9NQV5 511 aa15.96■□□□□ 0.15
SIRPA-204ENST00000622179 LARP6Q9BRS8 491 aaKnown RBP15.95■□□□□ 0.14
SIRPA-204ENST00000622179 DCTPP1Q9H773 170 aa15.95■□□□□ 0.14
SIRPA-204ENST00000622179 CEP85Q6P2H3 762 aa15.95■□□□□ 0.14
SIRPA-204ENST00000622179 BICD2Q8TD16 824 aa15.95■□□□□ 0.14
SIRPA-204ENST00000622179 LRRC59Q96AG4 307 aaKnown RBP15.95■□□□□ 0.14
SIRPA-204ENST00000622179 TET3O43151 1660 aa15.95■□□□□ 0.14
SIRPA-204ENST00000622179 KIF1BO60333 1816 aa15.95■□□□□ 0.14
SIRPA-204ENST00000622179 NRDCO43847 1150 aa15.95■□□□□ 0.14
SIRPA-204ENST00000622179 AMOTQ4VCS5 1084 aa15.94■□□□□ 0.14
SIRPA-204ENST00000622179 DBF4Q9UBU7 674 aaPredicted RBP15.94■□□□□ 0.14
SIRPA-204ENST00000622179 FLT4P35916 1363 aa15.94■□□□□ 0.14
SIRPA-204ENST00000622179 LTKP29376 864 aa15.94■□□□□ 0.14
SIRPA-204ENST00000622179 STK3Q13188 491 aa15.94■□□□□ 0.14
SIRPA-204ENST00000622179 CYP46A1Q9Y6A2 500 aa15.94■□□□□ 0.14
SIRPA-204ENST00000622179 PSMA5P28066 241 aa15.94■□□□□ 0.14
SIRPA-204ENST00000622179 OTUD7AQ8TE49 926 aaPredicted RBP15.94■□□□□ 0.14
SIRPA-204ENST00000622179 JAKMIP1Q96N16 626 aaKnown RBP15.94■□□□□ 0.14
SIRPA-204ENST00000622179 CHPF2Q9P2E5 772 aa15.94■□□□□ 0.14
SIRPA-204ENST00000622179 FAM177BA6PVY3 158 aa15.93■□□□□ 0.14
SIRPA-204ENST00000622179 PTCD1O75127 700 aaKnown RBP15.93■□□□□ 0.14
SIRPA-204ENST00000622179 PDE1AP54750 535 aa15.93■□□□□ 0.14
SIRPA-204ENST00000622179 PLEKHM2Q8IWE5 1019 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms