RNA–Protein interactions for RNA: ENST00000622134.4

COL25A1-209, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 4,819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-209ENST00000622134 NCBP3Q53F19 620 aaKnown RBP12.45□□□□□ -0.42
COL25A1-209ENST00000622134 RNF214Q8ND24 703 aa12.45□□□□□ -0.42
COL25A1-209ENST00000622134 SCAF11Q99590 1463 aaKnown RBP12.45□□□□□ -0.42
COL25A1-209ENST00000622134 POLD1P28340 1107 aa12.45□□□□□ -0.42
COL25A1-209ENST00000622134 IKQ13123 557 aaPredicted RBP12.45□□□□□ -0.42
COL25A1-209ENST00000622134 SMAP1Q8IYB5 467 aaPredicted RBP12.45□□□□□ -0.42
COL25A1-209ENST00000622134 GTPBP4Q9BZE4 634 aaKnown RBP12.45□□□□□ -0.42
COL25A1-209ENST00000622134 HSP90B2PQ58FF3 399 aa12.45□□□□□ -0.42
COL25A1-209ENST00000622134 FMNL2Q96PY5 1086 aa12.45□□□□□ -0.42
COL25A1-209ENST00000622134 CEP126Q9P2H0 1117 aa12.45□□□□□ -0.42
COL25A1-209ENST00000622134 ABCC11Q96J66 1382 aa12.45□□□□□ -0.42
COL25A1-209ENST00000622134 CNTROBQ8N137 903 aa12.45□□□□□ -0.42
COL25A1-209ENST00000622134 KCNA6P17658 529 aa12.44□□□□□ -0.42
COL25A1-209ENST00000622134 HSPA2P54652 639 aa12.44□□□□□ -0.42
COL25A1-209ENST00000622134 RRS1Q15050 365 aaKnown RBP12.44□□□□□ -0.42
COL25A1-209ENST00000622134 LEKR1Q6ZMV7 388 aa12.44□□□□□ -0.42
COL25A1-209ENST00000622134 PDE3AQ14432 1141 aa12.44□□□□□ -0.42
COL25A1-209ENST00000622134 TTC39AQ5SRH9 613 aa12.44□□□□□ -0.42
COL25A1-209ENST00000622134 LARP1Q6PKG0 1096 aaKnown RBP12.44□□□□□ -0.42
COL25A1-209ENST00000622134 HOMER1Q86YM7 354 aa12.44□□□□□ -0.42
COL25A1-209ENST00000622134 SURF6O75683 361 aaKnown RBP12.44□□□□□ -0.42
COL25A1-209ENST00000622134 CBX1P83916 185 aa12.44□□□□□ -0.42
COL25A1-209ENST00000622134 PUS7Q96PZ0 661 aaKnown RBP12.44□□□□□ -0.42
COL25A1-209ENST00000622134 ADGRF5Q8IZF2 1346 aa12.44□□□□□ -0.42
COL25A1-209ENST00000622134 INTS3Q68E01 1043 aaKnown RBP12.44□□□□□ -0.42
COL25A1-209ENST00000622134 CCDC112Q8NEF3 446 aa12.44□□□□□ -0.42
COL25A1-209ENST00000622134 TPD52L1Q16890 204 aaPredicted RBP12.43□□□□□ -0.42
COL25A1-209ENST00000622134 SLF2Q8IX21 1173 aa12.43□□□□□ -0.42
COL25A1-209ENST00000622134 DEF6Q9H4E7 631 aa12.43□□□□□ -0.42
COL25A1-209ENST00000622134 CGNQ9P2M7 1197 aaKnown RBP12.43□□□□□ -0.42
COL25A1-209ENST00000622134 TAF7Q15545 349 aaPredicted RBP12.43□□□□□ -0.42
COL25A1-209ENST00000622134 RPGRQ92834 1020 aaKnown RBP12.43□□□□□ -0.42
COL25A1-209ENST00000622134 C8orf37Q96NL8 207 aa12.43□□□□□ -0.42
COL25A1-209ENST00000622134 SYCP2Q9BX26 1530 aa12.43□□□□□ -0.42
COL25A1-209ENST00000622134 NOL8Q76FK4 1167 aaKnown RBP12.43□□□□□ -0.42
COL25A1-209ENST00000622134 CCAR2Q8N163 923 aaKnown RBP12.43□□□□□ -0.42
COL25A1-209ENST00000622134 HOOK1Q9UJC3 728 aaKnown RBP12.43□□□□□ -0.42
COL25A1-209ENST00000622134 SLC4A2P04920 1241 aa12.42□□□□□ -0.42
COL25A1-209ENST00000622134 CEP170Q5SW79 1584 aa12.42□□□□□ -0.42
COL25A1-209ENST00000622134 CTTNBP2Q8WZ74 1663 aa12.42□□□□□ -0.42
COL25A1-209ENST00000622134 PSMA5P28066 241 aa12.42□□□□□ -0.42
COL25A1-209ENST00000622134 DDB1Q16531 1140 aa12.42□□□□□ -0.42
COL25A1-209ENST00000622134 ANO2Q9NQ90 1003 aa12.42□□□□□ -0.42
COL25A1-209ENST00000622134 ADAMTS8Q9UP79 889 aa12.42□□□□□ -0.42
COL25A1-209ENST00000622134 CFAP74Q9C0B2 1584 aa12.42□□□□□ -0.42
COL25A1-209ENST00000622134 USP8P40818 1118 aa12.42□□□□□ -0.42
COL25A1-209ENST00000622134 RBM5P52756 815 aaKnown RBP eCLIP12.42□□□□□ -0.42
COL25A1-209ENST00000622134 CCDC70Q6NSX1 233 aa12.42□□□□□ -0.42
COL25A1-209ENST00000622134 ZNF287Q9HBT7 754 aa12.42□□□□□ -0.42
COL25A1-209ENST00000622134 FSD1Q9BTV5 496 aa12.41□□□□□ -0.42
COL25A1-209ENST00000622134 ACEP12821 1306 aa12.41□□□□□ -0.42
COL25A1-209ENST00000622134 TRPM2O94759 1503 aa12.41□□□□□ -0.42
COL25A1-209ENST00000622134 RDXP35241 583 aaKnown RBP12.41□□□□□ -0.42
COL25A1-209ENST00000622134 NCKAP5LQ9HCH0 1330 aa12.41□□□□□ -0.42
COL25A1-209ENST00000622134 RABEP1Q15276 862 aa12.41□□□□□ -0.42
COL25A1-209ENST00000622134 MPRIPQ6WCQ1 1025 aa12.41□□□□□ -0.42
COL25A1-209ENST00000622134 PRIMPOLQ96LW4 560 aa12.41□□□□□ -0.42
COL25A1-209ENST00000622134 PRPF40AO75400 957 aaKnown RBP12.41□□□□□ -0.42
COL25A1-209ENST00000622134 DNAJC2Q99543 621 aaKnown RBP12.41□□□□□ -0.42
COL25A1-209ENST00000622134 AKAP2Q9Y2D5 859 aa12.41□□□□□ -0.42
COL25A1-209ENST00000622134 WWC2Q6AWC2 1192 aa12.4□□□□□ -0.42
COL25A1-209ENST00000622134 XRCC6P12956 609 aaKnown RBP eCLIP12.4□□□□□ -0.42
COL25A1-209ENST00000622134 MYL6BP14649 208 aa12.4□□□□□ -0.42
COL25A1-209ENST00000622134 SHANK2Q9UPX8 1470 aa12.4□□□□□ -0.42
COL25A1-209ENST00000622134 IFIT1P09914 478 aaKnown RBP12.4□□□□□ -0.42
COL25A1-209ENST00000622134 RFC4P35249 363 aa12.4□□□□□ -0.42
COL25A1-209ENST00000622134 BICDL1Q6ZP65 573 aa12.4□□□□□ -0.42
COL25A1-209ENST00000622134 ANKRD24Q8TF21 1146 aa12.4□□□□□ -0.42
COL25A1-209ENST00000622134 TRAPPC8Q9Y2L5 1435 aa12.4□□□□□ -0.42
COL25A1-209ENST00000622134 FYB1O15117 783 aa12.4□□□□□ -0.43
COL25A1-209ENST00000622134 PTCD1O75127 700 aaKnown RBP12.4□□□□□ -0.43
COL25A1-209ENST00000622134 DHX8Q14562 1220 aaKnown RBP12.4□□□□□ -0.43
COL25A1-209ENST00000622134 MCM2P49736 904 aa12.39□□□□□ -0.43
COL25A1-209ENST00000622134 EXOSC9Q06265 439 aaKnown RBP12.39□□□□□ -0.43
COL25A1-209ENST00000622134 PPP1R42Q7Z4L9 355 aa12.39□□□□□ -0.43
COL25A1-209ENST00000622134 ST5P78524 1137 aa12.39□□□□□ -0.43
COL25A1-209ENST00000622134 CAVIN4Q5BKX8 364 aa12.39□□□□□ -0.43
COL25A1-209ENST00000622134 NME9Q86XW9 330 aa12.39□□□□□ -0.43
COL25A1-209ENST00000622134 CCP110O43303 1012 aa12.39□□□□□ -0.43
COL25A1-209ENST00000622134 CDC45O75419 566 aa12.39□□□□□ -0.43
COL25A1-209ENST00000622134 ERCC4Q92889 916 aaPredicted RBP12.39□□□□□ -0.43
COL25A1-209ENST00000622134 K7ELQ4 463 aaPredicted RBP12.39□□□□□ -0.43
COL25A1-209ENST00000622134 ZCRB1Q8TBF4 217 aaKnown RBP12.39□□□□□ -0.43
COL25A1-209ENST00000622134 HYPKQ9NX55 129 aa12.39□□□□□ -0.43
COL25A1-209ENST00000622134 PDZRN3Q9UPQ7 1066 aa12.39□□□□□ -0.43
COL25A1-209ENST00000622134 CNKSR2Q8WXI2 1034 aa12.38□□□□□ -0.43
COL25A1-209ENST00000622134 ANKRD36BQ8N2N9 1353 aa12.38□□□□□ -0.43
COL25A1-209ENST00000622134 DNAJC5Q9H3Z4 198 aa12.38□□□□□ -0.43
COL25A1-209ENST00000622134 FOXD4L6Q3SYB3 417 aaPredicted RBP12.38□□□□□ -0.43
COL25A1-209ENST00000622134 FOXD4L3Q6VB84 417 aaPredicted RBP12.38□□□□□ -0.43
COL25A1-209ENST00000622134 CDCA7LQ96GN5 454 aa12.38□□□□□ -0.43
COL25A1-209ENST00000622134 TIGD1Q96MW7 591 aa12.38□□□□□ -0.43
COL25A1-209ENST00000622134 KIF20AO95235 890 aa12.37□□□□□ -0.43
COL25A1-209ENST00000622134 SAMD1Q6SPF0 538 aaPredicted RBP12.37□□□□□ -0.43
COL25A1-209ENST00000622134 ANKRD20A12PQ8NF67 263 aa12.37□□□□□ -0.43
COL25A1-209ENST00000622134 GCC1Q96CN9 775 aa12.37□□□□□ -0.43
COL25A1-209ENST00000622134 TSR1Q2NL82 804 aaKnown RBP12.37□□□□□ -0.43
COL25A1-209ENST00000622134 CDC5LQ99459 802 aaKnown RBP12.37□□□□□ -0.43
COL25A1-209ENST00000622134 ZFYVE16Q7Z3T8 1539 aa12.37□□□□□ -0.43
COL25A1-209ENST00000622134 TERF1P54274 439 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms