RNA–Protein interactions for RNA: ENST00000620789.4

LITAF-220, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-220ENST00000620789 TRIM37O94972 964 aa24.65■■□□□ 1.54
LITAF-220ENST00000620789 SF3B2Q13435 895 aaKnown RBP24.65■■□□□ 1.54
LITAF-220ENST00000620789 PKD1L3Q7Z443 1732 aa24.65■■□□□ 1.54
LITAF-220ENST00000620789 TNS1Q9HBL0 1735 aaKnown RBP24.65■■□□□ 1.54
LITAF-220ENST00000620789 SBF2Q86WG5 1849 aa24.64■■□□□ 1.54
LITAF-220ENST00000620789 DDX54Q8TDD1 881 aaKnown RBP24.64■■□□□ 1.54
LITAF-220ENST00000620789 RALBP1Q15311 655 aa24.63■■□□□ 1.53
LITAF-220ENST00000620789 CFAP53Q96M91 514 aa24.63■■□□□ 1.53
LITAF-220ENST00000620789 PLEKHG2Q9H7P9 1386 aa24.63■■□□□ 1.53
LITAF-220ENST00000620789 KDRP35968 1356 aa24.62■■□□□ 1.53
LITAF-220ENST00000620789 AEBP1Q8IUX7 1158 aa24.61■■□□□ 1.53
LITAF-220ENST00000620789 PCDH11XQ9BZA7 1347 aa24.61■■□□□ 1.53
LITAF-220ENST00000620789 PCDH11YQ9BZA8 1340 aa24.61■■□□□ 1.53
LITAF-220ENST00000620789 SULT6B1Q6IMI4 303 aa24.6■■□□□ 1.53
LITAF-220ENST00000620789 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.59■■□□□ 1.53
LITAF-220ENST00000620789 SPG7Q9UQ90 795 aa24.59■■□□□ 1.53
LITAF-220ENST00000620789 BAG6P46379 1132 aa24.58■■□□□ 1.53
LITAF-220ENST00000620789 NHSQ6T4R5 1651 aa24.58■■□□□ 1.53
LITAF-220ENST00000620789 DEFB132Q7Z7B7 95 aa24.57■■□□□ 1.52
LITAF-220ENST00000620789 CYP27B1O15528 508 aa24.56■■□□□ 1.52
LITAF-220ENST00000620789 BCL11BQ9C0K0 894 aaPredicted RBP24.56■■□□□ 1.52
LITAF-220ENST00000620789 U2SURPO15042 1029 aaKnown RBP24.55■■□□□ 1.52
LITAF-220ENST00000620789 APBA3O96018 575 aa24.55■■□□□ 1.52
LITAF-220ENST00000620789 ACSBG1Q96GR2 724 aa24.55■■□□□ 1.52
LITAF-220ENST00000620789 HMOX1P09601 288 aa24.54■■□□□ 1.52
LITAF-220ENST00000620789 PTF1AQ7RTS3 328 aa24.54■■□□□ 1.52
LITAF-220ENST00000620789 DOT1LQ8TEK3 1739 aa24.54■■□□□ 1.52
LITAF-220ENST00000620789 KCNQ2O43526 872 aa24.53■■□□□ 1.52
LITAF-220ENST00000620789 PLEKHO1Q53GL0 409 aaPredicted RBP24.53■■□□□ 1.52
LITAF-220ENST00000620789 PRKRIP1Q9H875 184 aaPredicted RBP24.53■■□□□ 1.52
LITAF-220ENST00000620789 NUDCQ9Y266 331 aa24.53■■□□□ 1.52
LITAF-220ENST00000620789 MYBBP1AQ9BQG0 1328 aaKnown RBP24.53■■□□□ 1.52
LITAF-220ENST00000620789 AMOTQ4VCS5 1084 aa24.52■■□□□ 1.52
LITAF-220ENST00000620789 EN1Q05925 392 aaPredicted RBP24.51■■□□□ 1.51
LITAF-220ENST00000620789 IFNL2Q8IZJ0 200 aa24.5■■□□□ 1.51
LITAF-220ENST00000620789 PHKG2P15735 406 aa24.49■■□□□ 1.51
LITAF-220ENST00000620789 NKX1-1Q15270 411 aaPredicted RBP24.49■■□□□ 1.51
LITAF-220ENST00000620789 RGPD3A6NKT7 1758 aaPredicted RBP24.49■■□□□ 1.51
LITAF-220ENST00000620789 RGPD4Q7Z3J3 1758 aa24.49■■□□□ 1.51
LITAF-220ENST00000620789 CAMKK2Q96RR4 588 aa24.48■■□□□ 1.51
LITAF-220ENST00000620789 BTAF1O14981 1849 aa24.47■■□□□ 1.51
LITAF-220ENST00000620789 TOGARAM1Q9Y4F4 1720 aa24.47■■□□□ 1.51
LITAF-220ENST00000620789 PRIM1P49642 420 aaKnown RBP24.47■■□□□ 1.51
LITAF-220ENST00000620789 ZNF530Q6P9A1 599 aaPredicted RBP24.47■■□□□ 1.51
LITAF-220ENST00000620789 KAT6BQ8WYB5 2073 aa24.47■■□□□ 1.51
LITAF-220ENST00000620789 PLSCR1O15162 318 aa24.46■■□□□ 1.51
LITAF-220ENST00000620789 U2AF1L5P0DN76 240 aaPredicted RBP24.46■■□□□ 1.51
LITAF-220ENST00000620789 U2AF1Q01081 240 aaKnown RBP eCLIP24.46■■□□□ 1.51
LITAF-220ENST00000620789 EZH2Q15910 746 aaKnown RBP24.46■■□□□ 1.51
LITAF-220ENST00000620789 SYTL4Q96C24 671 aaPredicted RBP24.46■■□□□ 1.51
LITAF-220ENST00000620789 RREB1Q92766 1687 aa24.44■■□□□ 1.5
LITAF-220ENST00000620789 RSPH6AQ9H0K4 717 aa24.44■■□□□ 1.5
LITAF-220ENST00000620789 HSP90AB1P08238 724 aaKnown RBP24.43■■□□□ 1.5
LITAF-220ENST00000620789 C1orf141Q5JVX7 400 aa24.43■■□□□ 1.5
LITAF-220ENST00000620789 ITGB4P16144 1822 aa24.41■■□□□ 1.5
LITAF-220ENST00000620789 FCHSD2O94868 740 aa24.41■■□□□ 1.5
LITAF-220ENST00000620789 PRKAR2BP31323 418 aa24.41■■□□□ 1.5
LITAF-220ENST00000620789 MTHFSDQ2M296 383 aaKnown RBP24.4■■□□□ 1.5
LITAF-220ENST00000620789 DCAF5Q96JK2 942 aa24.4■■□□□ 1.5
LITAF-220ENST00000620789 KDM6AO15550 1401 aaPredicted RBP24.39■■□□□ 1.5
LITAF-220ENST00000620789 AKAP4Q5JQC9 854 aa24.39■■□□□ 1.49
LITAF-220ENST00000620789 NUP188Q5SRE5 1749 aa24.38■■□□□ 1.49
LITAF-220ENST00000620789 MPRIPQ6WCQ1 1025 aa24.38■■□□□ 1.49
LITAF-220ENST00000620789 ANP32CO43423 234 aa24.37■■□□□ 1.49
LITAF-220ENST00000620789 TXNRD1Q16881 649 aa24.36■■□□□ 1.49
LITAF-220ENST00000620789 PROM2Q8N271 834 aa24.36■■□□□ 1.49
LITAF-220ENST00000620789 GAS2L2Q8NHY3 880 aa24.36■■□□□ 1.49
LITAF-220ENST00000620789 PHACTR3Q96KR7 559 aa24.36■■□□□ 1.49
LITAF-220ENST00000620789 ERVV-2B6SEH9 535 aa24.35■■□□□ 1.49
LITAF-220ENST00000620789 TMOD3Q9NYL9 352 aa24.35■■□□□ 1.49
LITAF-220ENST00000620789 SCN11AQ9UI33 1791 aa24.34■■□□□ 1.49
LITAF-220ENST00000620789 PIGBQ92521 554 aa24.34■■□□□ 1.49
LITAF-220ENST00000620789 LY75O60449 1722 aa24.33■■□□□ 1.49
LITAF-220ENST00000620789 ADAMTS7Q9UKP4 1686 aa24.32■■□□□ 1.48
LITAF-220ENST00000620789 MAP3K5Q99683 1374 aa24.31■■□□□ 1.48
LITAF-220ENST00000620789 CABP4P57796 275 aa24.3■■□□□ 1.48
LITAF-220ENST00000620789 PLEKHF1Q96S99 279 aa24.3■■□□□ 1.48
LITAF-220ENST00000620789 PNNQ9H307 717 aaKnown RBP24.3■■□□□ 1.48
LITAF-220ENST00000620789 VIRMAQ69YN4 1812 aaKnown RBP24.3■■□□□ 1.48
LITAF-220ENST00000620789 PALLDQ8WX93 1383 aa24.29■■□□□ 1.48
LITAF-220ENST00000620789 GNAT3A8MTJ3 354 aa24.29■■□□□ 1.48
LITAF-220ENST00000620789 RNMTO43148 476 aaKnown RBP24.29■■□□□ 1.48
LITAF-220ENST00000620789 NEFMP07197 916 aa24.29■■□□□ 1.48
LITAF-220ENST00000620789 WDR43Q15061 677 aaKnown RBP eCLIP24.29■■□□□ 1.48
LITAF-220ENST00000620789 LGR6Q9HBX8 967 aa24.29■■□□□ 1.48
LITAF-220ENST00000620789 MRC1P22897 1456 aa24.28■■□□□ 1.48
LITAF-220ENST00000620789 SLC27A3Q5K4L6 730 aa24.28■■□□□ 1.48
LITAF-220ENST00000620789 SMARCC1Q92922 1105 aaPredicted RBP24.28■■□□□ 1.48
LITAF-220ENST00000620789 NBPF14Q5TI25 921 aa24.27■■□□□ 1.48
LITAF-220ENST00000620789 LRRC4BQ9NT99 713 aa24.27■■□□□ 1.48
LITAF-220ENST00000620789 PAPPAQ13219 1627 aa24.26■■□□□ 1.47
LITAF-220ENST00000620789 NFATC2IPQ8NCF5 419 aa24.26■■□□□ 1.47
LITAF-220ENST00000620789 SLC52A2Q9HAB3 445 aa24.26■■□□□ 1.47
LITAF-220ENST00000620789 ATG3Q9NT62 314 aa24.25■■□□□ 1.47
LITAF-220ENST00000620789 ASAP1Q9ULH1 1129 aa24.25■■□□□ 1.47
LITAF-220ENST00000620789 MAPK8IP3Q9UPT6 1336 aa24.25■■□□□ 1.47
LITAF-220ENST00000620789 CCDC184Q52MB2 194 aa24.24■■□□□ 1.47
LITAF-220ENST00000620789 ANO8Q9HCE9 1232 aaPredicted RBP24.24■■□□□ 1.47
LITAF-220ENST00000620789 CCNL1Q9UK58 526 aaPredicted RBP24.24■■□□□ 1.47
LITAF-220ENST00000620789 R3HDM1Q15032 1099 aaKnown RBP24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms