RNA–Protein interactions for RNA: ENST00000619785.1

SENP3-210, Transcript of SUMO specific peptidase 3, humanhuman

TSL 3

Gene SENP3, Length 634 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-210ENST00000619785 SEPT12Q8IYM1 358 aa11.05□□□□□ -0.64
SENP3-210ENST00000619785 SPATA31E1Q6ZUB1 1445 aa11.04□□□□□ -0.64
SENP3-210ENST00000619785 RGPD3A6NKT7 1758 aaPredicted RBP11.04□□□□□ -0.64
SENP3-210ENST00000619785 RGPD4Q7Z3J3 1758 aa11.04□□□□□ -0.64
SENP3-210ENST00000619785 APBB1O00213 710 aa11.04□□□□□ -0.64
SENP3-210ENST00000619785 FOXO3O43524 673 aa11.04□□□□□ -0.64
SENP3-210ENST00000619785 EN1Q05925 392 aaPredicted RBP11.04□□□□□ -0.64
SENP3-210ENST00000619785 ESCO1Q5FWF5 840 aa11.04□□□□□ -0.64
SENP3-210ENST00000619785 C3orf67Q6ZVT6 689 aa11.04□□□□□ -0.64
SENP3-210ENST00000619785 SIRT1Q96EB6 747 aa11.04□□□□□ -0.64
SENP3-210ENST00000619785 PIK3C2GO75747 1445 aa11.03□□□□□ -0.64
SENP3-210ENST00000619785 RRBP1Q9P2E9 1410 aaKnown RBP11.03□□□□□ -0.64
SENP3-210ENST00000619785 PHF14O94880 888 aa11.03□□□□□ -0.64
SENP3-210ENST00000619785 KRT27Q7Z3Y8 459 aa11.03□□□□□ -0.64
SENP3-210ENST00000619785 GPCPD1Q9NPB8 672 aa11.03□□□□□ -0.64
SENP3-210ENST00000619785 EVX2Q03828 476 aa11.02□□□□□ -0.65
SENP3-210ENST00000619785 CDHR5Q9HBB8 845 aa11.02□□□□□ -0.65
SENP3-210ENST00000619785 ANO8Q9HCE9 1232 aaPredicted RBP11.02□□□□□ -0.65
SENP3-210ENST00000619785 PODXL2Q9NZ53 605 aa11.02□□□□□ -0.65
SENP3-210ENST00000619785 MDM2Q00987 491 aaPredicted RBP11.01□□□□□ -0.65
SENP3-210ENST00000619785 SH3D19Q5HYK7 790 aa11.01□□□□□ -0.65
SENP3-210ENST00000619785 REPIN1Q9BWE0 567 aaKnown RBP11.01□□□□□ -0.65
SENP3-210ENST00000619785 ARHGEF10O15013 1369 aa11.01□□□□□ -0.65
SENP3-210ENST00000619785 PARD3Q8TEW0 1356 aa11.01□□□□□ -0.65
SENP3-210ENST00000619785 DLC1Q96QB1 1528 aa11□□□□□ -0.65
SENP3-210ENST00000619785 BAG6P46379 1132 aa11□□□□□ -0.65
SENP3-210ENST00000619785 SF3B2Q13435 895 aaKnown RBP11□□□□□ -0.65
SENP3-210ENST00000619785 DCBLD2Q96PD2 775 aa11□□□□□ -0.65
SENP3-210ENST00000619785 COLQQ9Y215 455 aaPredicted RBP11□□□□□ -0.65
SENP3-210ENST00000619785 ANKRD30BQ9BXX2 1392 aa11□□□□□ -0.65
SENP3-210ENST00000619785 PLEKHH1Q9ULM0 1364 aa11□□□□□ -0.65
SENP3-210ENST00000619785 ANKARQ7Z5J8 1434 aa11□□□□□ -0.65
SENP3-210ENST00000619785 SLC34A2O95436 690 aa10.99□□□□□ -0.65
SENP3-210ENST00000619785 C1orf115Q9H7X2 142 aa10.99□□□□□ -0.65
SENP3-210ENST00000619785 YTHDC2Q9H6S0 1430 aaKnown RBP10.99□□□□□ -0.65
SENP3-210ENST00000619785 SSTR3P32745 418 aaPredicted RBP10.98□□□□□ -0.65
SENP3-210ENST00000619785 XPCQ01831 940 aaPredicted RBP10.98□□□□□ -0.65
SENP3-210ENST00000619785 SLC39A7Q92504 469 aa10.98□□□□□ -0.65
SENP3-210ENST00000619785 NPDC1Q9NQX5 325 aaPredicted RBP10.98□□□□□ -0.65
SENP3-210ENST00000619785 PHRF1Q9P1Y6 1649 aaKnown RBP10.98□□□□□ -0.65
SENP3-210ENST00000619785 A6NJR5 290 aa10.97□□□□□ -0.65
SENP3-210ENST00000619785 KRT28Q7Z3Y7 464 aa10.97□□□□□ -0.65
SENP3-210ENST00000619785 SLAIN1Q8ND83 568 aa10.97□□□□□ -0.65
SENP3-210ENST00000619785 SBF2Q86WG5 1849 aa10.97□□□□□ -0.65
SENP3-210ENST00000619785 CHD4Q14839 1912 aa10.96□□□□□ -0.65
SENP3-210ENST00000619785 CASZ1Q86V15 1759 aa10.96□□□□□ -0.65
SENP3-210ENST00000619785 ITSN1Q15811 1721 aa10.96□□□□□ -0.65
SENP3-210ENST00000619785 ADGRF5Q8IZF2 1346 aa10.96□□□□□ -0.65
SENP3-210ENST00000619785 PSDA5PKW4 1024 aaPredicted RBP10.96□□□□□ -0.65
SENP3-210ENST00000619785 FAM83GA6ND36 823 aa10.96□□□□□ -0.65
SENP3-210ENST00000619785 SKIV2LQ15477 1246 aaKnown RBP10.96□□□□□ -0.65
SENP3-210ENST00000619785 TYW1BQ6NUM6 668 aa10.96□□□□□ -0.65
SENP3-210ENST00000619785 WAPLQ7Z5K2 1190 aa10.96□□□□□ -0.65
SENP3-210ENST00000619785 PARP4Q9UKK3 1724 aaKnown RBP10.95□□□□□ -0.66
SENP3-210ENST00000619785 SPATA31A5Q5VU36 1347 aa10.95□□□□□ -0.66
SENP3-210ENST00000619785 SPATA31A7Q8IWB4 1347 aa10.95□□□□□ -0.66
SENP3-210ENST00000619785 CLUAP1Q96AJ1 413 aa10.95□□□□□ -0.66
SENP3-210ENST00000619785 CAMKK2Q96RR4 588 aa10.95□□□□□ -0.66
SENP3-210ENST00000619785 TMUB1Q9BVT8 246 aa10.95□□□□□ -0.66
SENP3-210ENST00000619785 PCDHGA10Q9Y5H3 936 aa10.95□□□□□ -0.66
SENP3-210ENST00000619785 PEAK1Q9H792 1746 aa10.95□□□□□ -0.66
SENP3-210ENST00000619785 OATP04181 439 aa10.94□□□□□ -0.66
SENP3-210ENST00000619785 PSME1Q06323 249 aa10.94□□□□□ -0.66
SENP3-210ENST00000619785 TSR1Q2NL82 804 aaKnown RBP10.94□□□□□ -0.66
SENP3-210ENST00000619785 FBXW7Q969H0 707 aa10.94□□□□□ -0.66
SENP3-210ENST00000619785 BEGAINQ9BUH8 593 aa10.94□□□□□ -0.66
SENP3-210ENST00000619785 LMO7Q8WWI1 1683 aa10.94□□□□□ -0.66
SENP3-210ENST00000619785 ADGRB1O14514 1584 aa10.94□□□□□ -0.66
SENP3-210ENST00000619785 TRAK2O60296 914 aa10.93□□□□□ -0.66
SENP3-210ENST00000619785 C7P10643 843 aa10.93□□□□□ -0.66
SENP3-210ENST00000619785 NINLQ9Y2I6 1382 aa10.92□□□□□ -0.66
SENP3-210ENST00000619785 MCM6Q14566 821 aa10.92□□□□□ -0.66
SENP3-210ENST00000619785 PELP1Q8IZL8 1130 aaKnown RBP10.92□□□□□ -0.66
SENP3-210ENST00000619785 CABLES1Q8TDN4 633 aa10.92□□□□□ -0.66
SENP3-210ENST00000619785 PHOX2BQ99453 314 aa10.92□□□□□ -0.66
SENP3-210ENST00000619785 TULP4Q9NRJ4 1543 aa10.92□□□□□ -0.66
SENP3-210ENST00000619785 TOPAZ1Q8N9V7 1692 aa10.92□□□□□ -0.66
SENP3-210ENST00000619785 GABBR2O75899 941 aa10.91□□□□□ -0.66
SENP3-210ENST00000619785 R3HDM1Q15032 1099 aaKnown RBP10.91□□□□□ -0.66
SENP3-210ENST00000619785 CAMTA1Q9Y6Y1 1673 aa10.91□□□□□ -0.66
SENP3-210ENST00000619785 WNK3Q9BYP7 1800 aa10.91□□□□□ -0.66
SENP3-210ENST00000619785 RAD21O60216 631 aa10.9□□□□□ -0.66
SENP3-210ENST00000619785 FAM98CQ17RN3 349 aaKnown RBP10.9□□□□□ -0.66
SENP3-210ENST00000619785 METTL3Q86U44 580 aaKnown RBP10.9□□□□□ -0.66
SENP3-210ENST00000619785 C14orf93Q9H972 538 aaKnown RBP10.9□□□□□ -0.66
SENP3-210ENST00000619785 PCDHGA4Q9Y5G9 962 aa10.9□□□□□ -0.66
SENP3-210ENST00000619785 SPATA31A1Q5TZJ5 1347 aa10.89□□□□□ -0.67
SENP3-210ENST00000619785 EZH2Q15910 746 aaKnown RBP10.89□□□□□ -0.67
SENP3-210ENST00000619785 FAM217BQ9NTX9 383 aaPredicted RBP10.89□□□□□ -0.67
SENP3-210ENST00000619785 POLR3EQ9NVU0 708 aa10.89□□□□□ -0.67
SENP3-210ENST00000619785 BTG4Q9NY30 223 aa10.89□□□□□ -0.67
SENP3-210ENST00000619785 NRKQ7Z2Y5 1582 aa10.89□□□□□ -0.67
SENP3-210ENST00000619785 UTRNP46939 3433 aa10.89□□□□□ -0.67
SENP3-210ENST00000619785 ATP7BP35670 1465 aa10.88□□□□□ -0.67
SENP3-210ENST00000619785 FAM161AQ3B820 660 aa10.88□□□□□ -0.67
SENP3-210ENST00000619785 FAM196AQ6ZSG2 479 aa10.88□□□□□ -0.67
SENP3-210ENST00000619785 ARHGEF28Q8N1W1 1705 aaKnown RBP10.88□□□□□ -0.67
SENP3-210ENST00000619785 YY1P25490 414 aa10.87□□□□□ -0.67
SENP3-210ENST00000619785 TRIM26Q12899 539 aaPredicted RBP10.87□□□□□ -0.67
SENP3-210ENST00000619785 TMEM132EQ6IEE7 984 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms