RNA–Protein interactions for RNA: ENST00000619707.4

C9orf72-206, Transcript of chromosome 9 open reading frame 72, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf72, Length 3,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-206ENST00000619707 TWISTNBQ3B726 338 aaPredicted RBP10.63□□□□□ -0.71
C9orf72-206ENST00000619707 HDGFL2Q7Z4V5 671 aaPredicted RBP10.63□□□□□ -0.71
C9orf72-206ENST00000619707 ZFYVE9O95405 1425 aa10.63□□□□□ -0.71
C9orf72-206ENST00000619707 ZDHHC9Q9Y397 364 aa10.63□□□□□ -0.71
C9orf72-206ENST00000619707 CAMSAP1Q5T5Y3 1602 aa10.62□□□□□ -0.71
C9orf72-206ENST00000619707 GGT6Q6P531 493 aa10.62□□□□□ -0.71
C9orf72-206ENST00000619707 C16orf71Q8IYS4 520 aaPredicted RBP10.62□□□□□ -0.71
C9orf72-206ENST00000619707 RNF214Q8ND24 703 aa10.62□□□□□ -0.71
C9orf72-206ENST00000619707 ARID3AQ99856 593 aa10.62□□□□□ -0.71
C9orf72-206ENST00000619707 SDSP20132 328 aa10.62□□□□□ -0.71
C9orf72-206ENST00000619707 MBIPQ9NS73 344 aa10.62□□□□□ -0.71
C9orf72-206ENST00000619707 HMOX1P09601 288 aa10.61□□□□□ -0.71
C9orf72-206ENST00000619707 FOXD4L5Q5VV16 416 aaPredicted RBP10.61□□□□□ -0.71
C9orf72-206ENST00000619707 FOXD4L4Q8WXT5 416 aaPredicted RBP10.61□□□□□ -0.71
C9orf72-206ENST00000619707 PRDM4Q9UKN5 801 aa10.61□□□□□ -0.71
C9orf72-206ENST00000619707 CDC42BPGQ6DT37 1551 aa10.61□□□□□ -0.71
C9orf72-206ENST00000619707 KIAA2012Q0VF49 1180 aa10.61□□□□□ -0.71
C9orf72-206ENST00000619707 PHACTR3Q96KR7 559 aa10.61□□□□□ -0.71
C9orf72-206ENST00000619707 KIF24Q5T7B8 1368 aa10.61□□□□□ -0.71
C9orf72-206ENST00000619707 KIDINS220Q9ULH0 1771 aa10.61□□□□□ -0.71
C9orf72-206ENST00000619707 MINK1Q8N4C8 1332 aaPredicted RBP10.61□□□□□ -0.71
C9orf72-206ENST00000619707 PRDM10Q9NQV6 1147 aa10.61□□□□□ -0.71
C9orf72-206ENST00000619707 SMAP1Q8IYB5 467 aaPredicted RBP10.6□□□□□ -0.71
C9orf72-206ENST00000619707 OTUD7AQ8TE49 926 aaPredicted RBP10.6□□□□□ -0.71
C9orf72-206ENST00000619707 SYAP1Q96A49 352 aaPredicted RBP10.6□□□□□ -0.71
C9orf72-206ENST00000619707 CHAMP1Q96JM3 812 aa10.6□□□□□ -0.71
C9orf72-206ENST00000619707 TSPY26PQ9H489 355 aa10.6□□□□□ -0.71
C9orf72-206ENST00000619707 NSFL1CQ9UNZ2 370 aaKnown RBP10.6□□□□□ -0.71
C9orf72-206ENST00000619707 APBB1O00213 710 aa10.6□□□□□ -0.71
C9orf72-206ENST00000619707 DNTTIP2Q5QJE6 756 aaKnown RBP10.6□□□□□ -0.71
C9orf72-206ENST00000619707 ERC2O15083 957 aa10.6□□□□□ -0.71
C9orf72-206ENST00000619707 ANKRD44Q8N8A2 993 aa10.6□□□□□ -0.71
C9orf72-206ENST00000619707 ZNF853P0CG23 659 aa10.59□□□□□ -0.71
C9orf72-206ENST00000619707 C8orf58Q8NAV2 365 aa10.59□□□□□ -0.71
C9orf72-206ENST00000619707 SENP3Q9H4L4 574 aaPredicted RBP10.59□□□□□ -0.71
C9orf72-206ENST00000619707 KNDC1Q76NI1 1749 aa10.59□□□□□ -0.71
C9orf72-206ENST00000619707 LMOD3Q0VAK6 560 aa10.59□□□□□ -0.71
C9orf72-206ENST00000619707 RPAP2Q8IXW5 612 aaPredicted RBP10.59□□□□□ -0.71
C9orf72-206ENST00000619707 CD163L1Q9NR16 1453 aa10.59□□□□□ -0.71
C9orf72-206ENST00000619707 NEXMIFQ5QGS0 1516 aa10.58□□□□□ -0.72
C9orf72-206ENST00000619707 SMARCA5O60264 1052 aaPredicted RBP10.58□□□□□ -0.72
C9orf72-206ENST00000619707 PHF14O94880 888 aa10.58□□□□□ -0.72
C9orf72-206ENST00000619707 NEK4P51957 841 aa10.58□□□□□ -0.72
C9orf72-206ENST00000619707 POLKQ9UBT6 870 aa10.58□□□□□ -0.72
C9orf72-206ENST00000619707 MCM2P49736 904 aa10.58□□□□□ -0.72
C9orf72-206ENST00000619707 TMX3Q96JJ7 454 aa10.58□□□□□ -0.72
C9orf72-206ENST00000619707 PRAM1Q96QH2 718 aa10.58□□□□□ -0.72
C9orf72-206ENST00000619707 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.58□□□□□ -0.72
C9orf72-206ENST00000619707 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.57□□□□□ -0.72
C9orf72-206ENST00000619707 KIF20BQ96Q89 1820 aa10.57□□□□□ -0.72
C9orf72-206ENST00000619707 YEATS2Q9ULM3 1422 aa10.57□□□□□ -0.72
C9orf72-206ENST00000619707 BRD1O95696 1058 aa10.57□□□□□ -0.72
C9orf72-206ENST00000619707 CEP85Q6P2H3 762 aa10.57□□□□□ -0.72
C9orf72-206ENST00000619707 ZFP91Q96JP5 570 aaPredicted RBP10.57□□□□□ -0.72
C9orf72-206ENST00000619707 CCDC94Q9BW85 323 aaPredicted RBP10.57□□□□□ -0.72
C9orf72-206ENST00000619707 ATP10DQ9P241 1426 aa10.57□□□□□ -0.72
C9orf72-206ENST00000619707 FBLN1P23142 703 aa10.56□□□□□ -0.72
C9orf72-206ENST00000619707 MYRIPQ8NFW9 859 aa10.56□□□□□ -0.72
C9orf72-206ENST00000619707 CABP1Q9NZU7 370 aa10.56□□□□□ -0.72
C9orf72-206ENST00000619707 HECW2Q9P2P5 1572 aa10.56□□□□□ -0.72
C9orf72-206ENST00000619707 ZBTB7CA1YPR0 619 aa10.56□□□□□ -0.72
C9orf72-206ENST00000619707 ABCC3O15438 1527 aa10.56□□□□□ -0.72
C9orf72-206ENST00000619707 HSP90B1P14625 803 aaKnown RBP10.56□□□□□ -0.72
C9orf72-206ENST00000619707 MCCP23508 829 aa10.55□□□□□ -0.72
C9orf72-206ENST00000619707 CDK19Q9BWU1 502 aa10.55□□□□□ -0.72
C9orf72-206ENST00000619707 FRMPD1Q5SYB0 1578 aa10.55□□□□□ -0.72
C9orf72-206ENST00000619707 PTPRMP28827 1452 aa10.55□□□□□ -0.72
C9orf72-206ENST00000619707 RIMS2Q9UQ26 1411 aa10.55□□□□□ -0.72
C9orf72-206ENST00000619707 HMGN5P82970 282 aaKnown RBP10.55□□□□□ -0.72
C9orf72-206ENST00000619707 PRIMPOLQ96LW4 560 aa10.55□□□□□ -0.72
C9orf72-206ENST00000619707 PIK3C2BO00750 1634 aa10.55□□□□□ -0.72
C9orf72-206ENST00000619707 ASXL2Q76L83 1435 aa10.55□□□□□ -0.72
C9orf72-206ENST00000619707 YTHDC2Q9H6S0 1430 aaKnown RBP10.55□□□□□ -0.72
C9orf72-206ENST00000619707 CLTCQ00610 1675 aaKnown RBP10.55□□□□□ -0.72
C9orf72-206ENST00000619707 FAM184AQ8NB25 1140 aa10.55□□□□□ -0.72
C9orf72-206ENST00000619707 HMMRO75330 724 aa10.54□□□□□ -0.72
C9orf72-206ENST00000619707 FAM83GA6ND36 823 aa10.54□□□□□ -0.72
C9orf72-206ENST00000619707 NOL8Q76FK4 1167 aaKnown RBP10.54□□□□□ -0.72
C9orf72-206ENST00000619707 RTL1A6NKG5 1358 aa10.54□□□□□ -0.72
C9orf72-206ENST00000619707 MSH6P52701 1360 aa10.54□□□□□ -0.72
C9orf72-206ENST00000619707 IL13P35225 146 aa10.53□□□□□ -0.72
C9orf72-206ENST00000619707 CUL4AQ13619 759 aa10.53□□□□□ -0.72
C9orf72-206ENST00000619707 UVSSAQ2YD98 709 aa10.53□□□□□ -0.72
C9orf72-206ENST00000619707 PIBF1Q8WXW3 757 aa10.53□□□□□ -0.72
C9orf72-206ENST00000619707 INTS4Q96HW7 963 aaKnown RBP10.53□□□□□ -0.72
C9orf72-206ENST00000619707 EMILIN1Q9Y6C2 1016 aa10.53□□□□□ -0.72
C9orf72-206ENST00000619707 FOXD4L6Q3SYB3 417 aaPredicted RBP10.53□□□□□ -0.72
C9orf72-206ENST00000619707 FOXD4L3Q6VB84 417 aaPredicted RBP10.53□□□□□ -0.72
C9orf72-206ENST00000619707 BBXQ8WY36 941 aaPredicted RBP10.53□□□□□ -0.72
C9orf72-206ENST00000619707 PDE1AP54750 535 aa10.53□□□□□ -0.72
C9orf72-206ENST00000619707 NOLC1Q14978 699 aaKnown RBP eCLIP10.53□□□□□ -0.72
C9orf72-206ENST00000619707 MPNDQ8N594 471 aa10.53□□□□□ -0.72
C9orf72-206ENST00000619707 MEIS3Q99687 375 aa10.53□□□□□ -0.72
C9orf72-206ENST00000619707 ARHGEF40Q8TER5 1519 aa10.53□□□□□ -0.72
C9orf72-206ENST00000619707 DCTN1Q14203 1278 aa10.52□□□□□ -0.73
C9orf72-206ENST00000619707 CNPY4Q8N129 248 aa10.52□□□□□ -0.73
C9orf72-206ENST00000619707 USP25Q9UHP3 1055 aa10.52□□□□□ -0.73
C9orf72-206ENST00000619707 ZNF830Q96NB3 372 aaPredicted RBP10.52□□□□□ -0.73
C9orf72-206ENST00000619707 OSBPL3Q9H4L5 887 aa10.52□□□□□ -0.73
C9orf72-206ENST00000619707 GDPD2Q9HCC8 539 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms