RNA–Protein interactions for RNA: ENST00000618608.1

LINC01828-207, Transcript of long intergenic non-protein coding RNA 1828, humanhuman

TSL 5

Gene LINC01828, Length 615 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01828-207ENST00000618608 HTRA3P83110 453 aa13.06□□□□□ -0.32
LINC01828-207ENST00000618608 FSTL1Q12841 308 aa13.05□□□□□ -0.32
LINC01828-207ENST00000618608 C16orf71Q8IYS4 520 aaPredicted RBP13.05□□□□□ -0.32
LINC01828-207ENST00000618608 ERBB3P21860 1342 aa13.05□□□□□ -0.32
LINC01828-207ENST00000618608 KIAA1551Q9HCM1 1747 aa13.05□□□□□ -0.32
LINC01828-207ENST00000618608 UBR3Q6ZT12 1888 aa13.04□□□□□ -0.32
LINC01828-207ENST00000618608 KCNQ4P56696 695 aa13.04□□□□□ -0.32
LINC01828-207ENST00000618608 STAC3Q96MF2 364 aa13.04□□□□□ -0.32
LINC01828-207ENST00000618608 CCNL1Q9UK58 526 aaPredicted RBP13.04□□□□□ -0.32
LINC01828-207ENST00000618608 TOGARAM1Q9Y4F4 1720 aa13.04□□□□□ -0.32
LINC01828-207ENST00000618608 ANKRD36BQ8N2N9 1353 aa13.04□□□□□ -0.32
LINC01828-207ENST00000618608 N4BP2Q86UW6 1770 aaPredicted RBP13.04□□□□□ -0.32
LINC01828-207ENST00000618608 BRCA1P38398 1863 aaKnown RBP13.04□□□□□ -0.32
LINC01828-207ENST00000618608 SOX12O15370 315 aa13.03□□□□□ -0.32
LINC01828-207ENST00000618608 DCAF11Q8TEB1 546 aa13.03□□□□□ -0.32
LINC01828-207ENST00000618608 NMRK2Q9NPI5 230 aa13.03□□□□□ -0.32
LINC01828-207ENST00000618608 MON2Q7Z3U7 1717 aa13.02□□□□□ -0.32
LINC01828-207ENST00000618608 ARFGEF1Q9Y6D6 1849 aa13.02□□□□□ -0.32
LINC01828-207ENST00000618608 HSPA1AP0DMV8 641 aaKnown RBP13.02□□□□□ -0.33
LINC01828-207ENST00000618608 HSPA1BP0DMV9 641 aaKnown RBP13.02□□□□□ -0.33
LINC01828-207ENST00000618608 FLAD1Q8NFF5 587 aa13.02□□□□□ -0.33
LINC01828-207ENST00000618608 SYTL4Q96C24 671 aaPredicted RBP13.02□□□□□ -0.33
LINC01828-207ENST00000618608 NLRP2Q9NX02 1062 aa13.02□□□□□ -0.33
LINC01828-207ENST00000618608 KDM2AQ9Y2K7 1162 aa13.02□□□□□ -0.33
LINC01828-207ENST00000618608 NSD2O96028 1365 aa13.02□□□□□ -0.33
LINC01828-207ENST00000618608 PLEKHG2Q9H7P9 1386 aa13.02□□□□□ -0.33
LINC01828-207ENST00000618608 C10orf71Q711Q0 1435 aa13.02□□□□□ -0.33
LINC01828-207ENST00000618608 C4BP0C0L5 1744 aa13.02□□□□□ -0.33
LINC01828-207ENST00000618608 HMGB2P26583 209 aaKnown RBP13□□□□□ -0.33
LINC01828-207ENST00000618608 CABP2Q9NPB3 220 aa13□□□□□ -0.33
LINC01828-207ENST00000618608 USP47Q96K76 1375 aa12.99□□□□□ -0.33
LINC01828-207ENST00000618608 CABP1Q9NZU7 370 aa12.99□□□□□ -0.33
LINC01828-207ENST00000618608 TTC21AQ8NDW8 1320 aa12.98□□□□□ -0.33
LINC01828-207ENST00000618608 NSD3Q9BZ95 1437 aa12.97□□□□□ -0.33
LINC01828-207ENST00000618608 TTC21BQ7Z4L5 1316 aa12.97□□□□□ -0.33
LINC01828-207ENST00000618608 PRIM1P49642 420 aaKnown RBP12.97□□□□□ -0.33
LINC01828-207ENST00000618608 DDX54Q8TDD1 881 aaKnown RBP12.97□□□□□ -0.33
LINC01828-207ENST00000618608 PXDNLA1KZ92 1463 aa12.97□□□□□ -0.33
LINC01828-207ENST00000618608 CENPJQ9HC77 1338 aaPredicted RBP12.96□□□□□ -0.33
LINC01828-207ENST00000618608 KCPQ6ZWJ8 1503 aa12.96□□□□□ -0.33
LINC01828-207ENST00000618608 SBF1O95248 1867 aa12.95□□□□□ -0.34
LINC01828-207ENST00000618608 KDM2BQ8NHM5 1336 aa12.95□□□□□ -0.34
LINC01828-207ENST00000618608 ANKRD24Q8TF21 1146 aa12.95□□□□□ -0.34
LINC01828-207ENST00000618608 RGPD2P0DJD1 1756 aa12.94□□□□□ -0.34
LINC01828-207ENST00000618608 SMC1BQ8NDV3 1235 aa12.94□□□□□ -0.34
LINC01828-207ENST00000618608 ZNF692Q9BU19 519 aaPredicted RBP12.94□□□□□ -0.34
LINC01828-207ENST00000618608 ITGB4P16144 1822 aa12.93□□□□□ -0.34
LINC01828-207ENST00000618608 BCS1LQ9Y276 419 aa12.92□□□□□ -0.34
LINC01828-207ENST00000618608 RAB3GAP2Q9H2M9 1393 aa12.92□□□□□ -0.34
LINC01828-207ENST00000618608 AK7Q96M32 723 aa12.91□□□□□ -0.34
LINC01828-207ENST00000618608 ARHGAP27Q6ZUM4 889 aa12.9□□□□□ -0.34
LINC01828-207ENST00000618608 USP31Q70CQ4 1352 aa12.9□□□□□ -0.34
LINC01828-207ENST00000618608 KTN1Q86UP2 1357 aaKnown RBP12.9□□□□□ -0.34
LINC01828-207ENST00000618608 PALLDQ8WX93 1383 aa12.9□□□□□ -0.34
LINC01828-207ENST00000618608 C4AP0C0L4 1744 aa12.89□□□□□ -0.35
LINC01828-207ENST00000618608 PHF14O94880 888 aa12.89□□□□□ -0.35
LINC01828-207ENST00000618608 FAM161AQ3B820 660 aa12.89□□□□□ -0.35
LINC01828-207ENST00000618608 C9orf131Q5VYM1 1079 aa12.89□□□□□ -0.35
LINC01828-207ENST00000618608 MAP2P11137 1827 aaKnown RBP12.89□□□□□ -0.35
LINC01828-207ENST00000618608 MEGF6O75095 1541 aa12.88□□□□□ -0.35
LINC01828-207ENST00000618608 TIAM2Q8IVF5 1701 aa12.88□□□□□ -0.35
LINC01828-207ENST00000618608 TGFB2P61812 414 aa12.88□□□□□ -0.35
LINC01828-207ENST00000618608 EVC2Q86UK5 1308 aa12.88□□□□□ -0.35
LINC01828-207ENST00000618608 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.87□□□□□ -0.35
LINC01828-207ENST00000618608 SSFA2P28290 1259 aa12.87□□□□□ -0.35
LINC01828-207ENST00000618608 RRAGCQ9HB90 399 aa12.87□□□□□ -0.35
LINC01828-207ENST00000618608 NBPF1Q3BBV0 1214 aa12.86□□□□□ -0.35
LINC01828-207ENST00000618608 ZCRB1Q8TBF4 217 aaKnown RBP12.86□□□□□ -0.35
LINC01828-207ENST00000618608 PRDM10Q9NQV6 1147 aa12.86□□□□□ -0.35
LINC01828-207ENST00000618608 FCHSD2O94868 740 aa12.85□□□□□ -0.35
LINC01828-207ENST00000618608 AMIGO3Q86WK7 504 aa12.85□□□□□ -0.35
LINC01828-207ENST00000618608 CCDC88AQ3V6T2 1871 aa12.85□□□□□ -0.35
LINC01828-207ENST00000618608 MMP10P09238 476 aa12.84□□□□□ -0.35
LINC01828-207ENST00000618608 RNF181Q9P0P0 153 aa12.84□□□□□ -0.35
LINC01828-207ENST00000618608 ZC3H4Q9UPT8 1303 aaKnown RBP12.84□□□□□ -0.35
LINC01828-207ENST00000618608 VIRMAQ69YN4 1812 aaKnown RBP12.83□□□□□ -0.35
LINC01828-207ENST00000618608 A0A0G2JLW4 131 aa12.83□□□□□ -0.36
LINC01828-207ENST00000618608 PDE4DIPQ5VU43 2346 aa12.82□□□□□ -0.36
LINC01828-207ENST00000618608 FOXN1O15353 648 aa12.82□□□□□ -0.36
LINC01828-207ENST00000618608 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.82□□□□□ -0.36
LINC01828-207ENST00000618608 CGNL1Q0VF96 1302 aa12.82□□□□□ -0.36
LINC01828-207ENST00000618608 IP6K1Q92551 441 aa12.81□□□□□ -0.36
LINC01828-207ENST00000618608 SMARCC1Q92922 1105 aaPredicted RBP12.81□□□□□ -0.36
LINC01828-207ENST00000618608 LTV1Q96GA3 475 aaPredicted RBP12.81□□□□□ -0.36
LINC01828-207ENST00000618608 DPEP1P16444 411 aa12.8□□□□□ -0.36
LINC01828-207ENST00000618608 MLLT1Q03111 559 aaPredicted RBP12.8□□□□□ -0.36
LINC01828-207ENST00000618608 SMIM5Q71RC9 77 aa12.8□□□□□ -0.36
LINC01828-207ENST00000618608 NME9Q86XW9 330 aa12.8□□□□□ -0.36
LINC01828-207ENST00000618608 AIDAQ96BJ3 306 aa12.8□□□□□ -0.36
LINC01828-207ENST00000618608 CCDC87Q9NVE4 849 aa12.8□□□□□ -0.36
LINC01828-207ENST00000618608 SBNO2Q9Y2G9 1366 aa12.8□□□□□ -0.36
LINC01828-207ENST00000618608 CTCFP49711 727 aaPredicted RBP12.79□□□□□ -0.36
LINC01828-207ENST00000618608 MPRIPQ6WCQ1 1025 aa12.79□□□□□ -0.36
LINC01828-207ENST00000618608 DCAF5Q96JK2 942 aa12.79□□□□□ -0.36
LINC01828-207ENST00000618608 PCDH11XQ9BZA7 1347 aa12.79□□□□□ -0.36
LINC01828-207ENST00000618608 PCDH11YQ9BZA8 1340 aa12.79□□□□□ -0.36
LINC01828-207ENST00000618608 COL5A3P25940 1745 aaPredicted RBP12.79□□□□□ -0.36
LINC01828-207ENST00000618608 CD163L1Q9NR16 1453 aa12.78□□□□□ -0.36
LINC01828-207ENST00000618608 GNPATO15228 680 aa12.78□□□□□ -0.36
LINC01828-207ENST00000618608 VEGFAP15692 232 aaPredicted RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms