RNA–Protein interactions for RNA: ENST00000618553.1

APOBEC3A-205, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3A, Length 1,103 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-205ENST00000618553 FAM9BQ8IZU0 186 aa17.45■□□□□ 0.38
APOBEC3A-205ENST00000618553 LRP5O75197 1615 aa17.45■□□□□ 0.38
APOBEC3A-205ENST00000618553 PITPNM1O00562 1244 aa17.44■□□□□ 0.38
APOBEC3A-205ENST00000618553 PIP4P2Q8N4L2 257 aa17.44■□□□□ 0.38
APOBEC3A-205ENST00000618553 ONECUT3O60422 494 aaPredicted RBP17.43■□□□□ 0.38
APOBEC3A-205ENST00000618553 FCHSD2O94868 740 aa17.43■□□□□ 0.38
APOBEC3A-205ENST00000618553 VPS72Q15906 364 aa17.43■□□□□ 0.38
APOBEC3A-205ENST00000618553 PSDA5PKW4 1024 aaPredicted RBP17.42■□□□□ 0.38
APOBEC3A-205ENST00000618553 FAM83GA6ND36 823 aa17.42■□□□□ 0.38
APOBEC3A-205ENST00000618553 U2AF1L5P0DN76 240 aaPredicted RBP17.42■□□□□ 0.38
APOBEC3A-205ENST00000618553 U2AF1Q01081 240 aaKnown RBP eCLIP17.42■□□□□ 0.38
APOBEC3A-205ENST00000618553 SF3B2Q13435 895 aaKnown RBP17.42■□□□□ 0.38
APOBEC3A-205ENST00000618553 CHRNA2Q15822 529 aa17.42■□□□□ 0.38
APOBEC3A-205ENST00000618553 ANKRD24Q8TF21 1146 aa17.42■□□□□ 0.38
APOBEC3A-205ENST00000618553 RSPH6AQ9H0K4 717 aa17.42■□□□□ 0.38
APOBEC3A-205ENST00000618553 U2SURPO15042 1029 aaKnown RBP17.41■□□□□ 0.38
APOBEC3A-205ENST00000618553 KRT27Q7Z3Y8 459 aa17.41■□□□□ 0.38
APOBEC3A-205ENST00000618553 EYA1Q99502 592 aa17.41■□□□□ 0.38
APOBEC3A-205ENST00000618553 CCDC9Q9Y3X0 531 aaKnown RBP17.41■□□□□ 0.38
APOBEC3A-205ENST00000618553 WDR17Q8IZU2 1322 aa17.41■□□□□ 0.38
APOBEC3A-205ENST00000618553 PLEKHF1Q96S99 279 aa17.4■□□□□ 0.38
APOBEC3A-205ENST00000618553 PNNQ9H307 717 aaKnown RBP17.4■□□□□ 0.38
APOBEC3A-205ENST00000618553 ZBTB7CA1YPR0 619 aa17.39■□□□□ 0.37
APOBEC3A-205ENST00000618553 WNK3Q9BYP7 1800 aa17.39■□□□□ 0.37
APOBEC3A-205ENST00000618553 RUNDC1Q96C34 613 aa17.38■□□□□ 0.37
APOBEC3A-205ENST00000618553 NBPF6Q5VWK0 638 aa17.37■□□□□ 0.37
APOBEC3A-205ENST00000618553 NGEFQ8N5V2 710 aa17.37■□□□□ 0.37
APOBEC3A-205ENST00000618553 NBPF4Q96M43 638 aa17.37■□□□□ 0.37
APOBEC3A-205ENST00000618553 PARP4Q9UKK3 1724 aaKnown RBP17.37■□□□□ 0.37
APOBEC3A-205ENST00000618553 CRB1P82279 1406 aa17.37■□□□□ 0.37
APOBEC3A-205ENST00000618553 PKD1L3Q7Z443 1732 aa17.36■□□□□ 0.37
APOBEC3A-205ENST00000618553 SULT6B1Q6IMI4 303 aa17.36■□□□□ 0.37
APOBEC3A-205ENST00000618553 LTV1Q96GA3 475 aaPredicted RBP17.36■□□□□ 0.37
APOBEC3A-205ENST00000618553 DLG5Q8TDM6 1919 aa17.35■□□□□ 0.37
APOBEC3A-205ENST00000618553 FAM98CQ17RN3 349 aaKnown RBP17.35■□□□□ 0.37
APOBEC3A-205ENST00000618553 FAM182BQ5T319 152 aa17.35■□□□□ 0.37
APOBEC3A-205ENST00000618553 AEBP1Q8IUX7 1158 aa17.35■□□□□ 0.37
APOBEC3A-205ENST00000618553 BTG4Q9NY30 223 aa17.35■□□□□ 0.37
APOBEC3A-205ENST00000618553 HMOX1P09601 288 aa17.34■□□□□ 0.37
APOBEC3A-205ENST00000618553 PRKAR2BP31323 418 aa17.34■□□□□ 0.37
APOBEC3A-205ENST00000618553 CARD10Q9BWT7 1032 aa17.34■□□□□ 0.37
APOBEC3A-205ENST00000618553 A0A0G2JS52 829 aa17.33■□□□□ 0.36
APOBEC3A-205ENST00000618553 BAG6P46379 1132 aa17.33■□□□□ 0.36
APOBEC3A-205ENST00000618553 MYT1Q01538 1121 aa17.33■□□□□ 0.36
APOBEC3A-205ENST00000618553 EN1Q05925 392 aaPredicted RBP17.33■□□□□ 0.36
APOBEC3A-205ENST00000618553 MKRN4PQ13434 485 aaPredicted RBP17.33■□□□□ 0.36
APOBEC3A-205ENST00000618553 ZBED9Q6R2W3 1325 aa17.32■□□□□ 0.36
APOBEC3A-205ENST00000618553 MAPK8IP3Q9UPT6 1336 aa17.31■□□□□ 0.36
APOBEC3A-205ENST00000618553 TNS1Q9HBL0 1735 aaKnown RBP17.31■□□□□ 0.36
APOBEC3A-205ENST00000618553 CSB-PGBD3P0DP91 1061 aa17.31■□□□□ 0.36
APOBEC3A-205ENST00000618553 HNRNPUQ00839 825 aaKnown RBP eCLIP17.31■□□□□ 0.36
APOBEC3A-205ENST00000618553 CCDC146Q8IYE0 955 aa17.31■□□□□ 0.36
APOBEC3A-205ENST00000618553 TCP11L2Q8N4U5 519 aa17.31■□□□□ 0.36
APOBEC3A-205ENST00000618553 NLRP2Q9NX02 1062 aa17.31■□□□□ 0.36
APOBEC3A-205ENST00000618553 MEGF6O75095 1541 aa17.31■□□□□ 0.36
APOBEC3A-205ENST00000618553 OVOS2A0A0G2JMS6 1433 aa17.3■□□□□ 0.36
APOBEC3A-205ENST00000618553 DISP2A7MBM2 1401 aa17.3■□□□□ 0.36
APOBEC3A-205ENST00000618553 APAF1O14727 1248 aa17.3■□□□□ 0.36
APOBEC3A-205ENST00000618553 CCDC27Q2M243 656 aa17.3■□□□□ 0.36
APOBEC3A-205ENST00000618553 LARP1Q6PKG0 1096 aaKnown RBP17.3■□□□□ 0.36
APOBEC3A-205ENST00000618553 SHANK3Q9BYB0 1731 aa17.3■□□□□ 0.36
APOBEC3A-205ENST00000618553 ADAMTS7Q9UKP4 1686 aa17.29■□□□□ 0.36
APOBEC3A-205ENST00000618553 NEFMP07197 916 aa17.29■□□□□ 0.36
APOBEC3A-205ENST00000618553 FXR2P51116 673 aaKnown RBP eCLIP17.29■□□□□ 0.36
APOBEC3A-205ENST00000618553 R3HDM1Q15032 1099 aaKnown RBP17.29■□□□□ 0.36
APOBEC3A-205ENST00000618553 TOM1L2Q6ZVM7 507 aa17.29■□□□□ 0.36
APOBEC3A-205ENST00000618553 USHBP1Q8N6Y0 703 aa17.29■□□□□ 0.36
APOBEC3A-205ENST00000618553 PHACTR3Q96KR7 559 aa17.29■□□□□ 0.36
APOBEC3A-205ENST00000618553 ZNF521Q96K83 1311 aa17.28■□□□□ 0.36
APOBEC3A-205ENST00000618553 TMPOP42166 694 aaKnown RBP17.28■□□□□ 0.36
APOBEC3A-205ENST00000618553 EVA1CP58658 441 aa17.28■□□□□ 0.36
APOBEC3A-205ENST00000618553 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.28■□□□□ 0.36
APOBEC3A-205ENST00000618553 LRRC37A3O60309 1634 aa17.28■□□□□ 0.36
APOBEC3A-205ENST00000618553 NFE2L2Q16236 605 aa17.27■□□□□ 0.36
APOBEC3A-205ENST00000618553 STRN4Q9NRL3 753 aa17.27■□□□□ 0.36
APOBEC3A-205ENST00000618553 THSD7AQ9UPZ6 1657 aa17.26■□□□□ 0.35
APOBEC3A-205ENST00000618553 VIRMAQ69YN4 1812 aaKnown RBP17.26■□□□□ 0.35
APOBEC3A-205ENST00000618553 SPATA31A1Q5TZJ5 1347 aa17.26■□□□□ 0.35
APOBEC3A-205ENST00000618553 SPATA31A5Q5VU36 1347 aa17.26■□□□□ 0.35
APOBEC3A-205ENST00000618553 SPATA31A7Q8IWB4 1347 aa17.26■□□□□ 0.35
APOBEC3A-205ENST00000618553 AMOTQ4VCS5 1084 aa17.26■□□□□ 0.35
APOBEC3A-205ENST00000618553 SP7Q8TDD2 431 aaPredicted RBP17.26■□□□□ 0.35
APOBEC3A-205ENST00000618553 THRAP3Q9Y2W1 955 aaKnown RBP17.26■□□□□ 0.35
APOBEC3A-205ENST00000618553 SPDYE2BA6NHP3 402 aa17.25■□□□□ 0.35
APOBEC3A-205ENST00000618553 SPDYE6P0CI01 402 aa17.25■□□□□ 0.35
APOBEC3A-205ENST00000618553 EZH2Q15910 746 aaKnown RBP17.25■□□□□ 0.35
APOBEC3A-205ENST00000618553 SPDYE2Q495Y8 402 aa17.25■□□□□ 0.35
APOBEC3A-205ENST00000618553 GAS2L2Q8NHY3 880 aa17.25■□□□□ 0.35
APOBEC3A-205ENST00000618553 RAPGEF4Q8WZA2 1011 aa17.25■□□□□ 0.35
APOBEC3A-205ENST00000618553 YTHDC1Q96MU7 727 aaKnown RBP17.24■□□□□ 0.35
APOBEC3A-205ENST00000618553 IL2RBP14784 551 aa17.23■□□□□ 0.35
APOBEC3A-205ENST00000618553 TATP17735 454 aaPredicted RBP17.23■□□□□ 0.35
APOBEC3A-205ENST00000618553 MTHFSDQ2M296 383 aaKnown RBP17.23■□□□□ 0.35
APOBEC3A-205ENST00000618553 BARGINQ6ZT62 677 aa17.23■□□□□ 0.35
APOBEC3A-205ENST00000618553 CDCA7Q9BWT1 371 aaPredicted RBP17.23■□□□□ 0.35
APOBEC3A-205ENST00000618553 HTATSF1O43719 755 aaKnown RBP17.22■□□□□ 0.35
APOBEC3A-205ENST00000618553 LMOD3Q0VAK6 560 aa17.22■□□□□ 0.35
APOBEC3A-205ENST00000618553 PLEKHO1Q53GL0 409 aaPredicted RBP17.22■□□□□ 0.35
APOBEC3A-205ENST00000618553 TRIM35Q9UPQ4 493 aa17.22■□□□□ 0.35
APOBEC3A-205ENST00000618553 SCN11AQ9UI33 1791 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms