RNA–Protein interactions for RNA: ENST00000618511.4

RDM1-222, Transcript of RAD52 motif containing 1, humanhuman

TSL 1 (best)

Gene RDM1, Length 518 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDM1-222ENST00000618511 SLC39A7Q92504 469 aa8.22□□□□□ -1.09
RDM1-222ENST00000618511 IP6K1Q92551 441 aa8.22□□□□□ -1.09
RDM1-222ENST00000618511 METRNQ9UJH8 293 aa8.22□□□□□ -1.09
RDM1-222ENST00000618511 PARP4Q9UKK3 1724 aaKnown RBP8.22□□□□□ -1.09
RDM1-222ENST00000618511 NCAPD2Q15021 1401 aa8.21□□□□□ -1.09
RDM1-222ENST00000618511 FYB1O15117 783 aa8.21□□□□□ -1.1
RDM1-222ENST00000618511 PLSCR1O15162 318 aa8.21□□□□□ -1.1
RDM1-222ENST00000618511 C7P10643 843 aa8.21□□□□□ -1.1
RDM1-222ENST00000618511 OTUD5Q96G74 571 aa8.21□□□□□ -1.1
RDM1-222ENST00000618511 CAMKK2Q96RR4 588 aa8.21□□□□□ -1.1
RDM1-222ENST00000618511 BMP2KQ9NSY1 1161 aaPredicted RBP8.21□□□□□ -1.1
RDM1-222ENST00000618511 PEAK1Q9H792 1746 aa8.2□□□□□ -1.1
RDM1-222ENST00000618511 PDE3BQ13370 1112 aa8.2□□□□□ -1.1
RDM1-222ENST00000618511 TOM1L2Q6ZVM7 507 aa8.2□□□□□ -1.1
RDM1-222ENST00000618511 TMC1Q8TDI8 760 aa8.2□□□□□ -1.1
RDM1-222ENST00000618511 COG3Q96JB2 828 aa8.2□□□□□ -1.1
RDM1-222ENST00000618511 CGNL1Q0VF96 1302 aa8.2□□□□□ -1.1
RDM1-222ENST00000618511 MAP3K19Q56UN5 1328 aa8.2□□□□□ -1.1
RDM1-222ENST00000618511 NSD2O96028 1365 aa8.2□□□□□ -1.1
RDM1-222ENST00000618511 LRRC37A3O60309 1634 aa8.19□□□□□ -1.1
RDM1-222ENST00000618511 EIF4G2P78344 907 aaKnown RBP eCLIP8.19□□□□□ -1.1
RDM1-222ENST00000618511 DDB1Q16531 1140 aa8.19□□□□□ -1.1
RDM1-222ENST00000618511 DEFB132Q7Z7B7 95 aa8.19□□□□□ -1.1
RDM1-222ENST00000618511 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.19□□□□□ -1.1
RDM1-222ENST00000618511 FAM212AQ96EL1 285 aa8.19□□□□□ -1.1
RDM1-222ENST00000618511 PCGF6Q9BYE7 350 aa8.19□□□□□ -1.1
RDM1-222ENST00000618511 INSRP06213 1382 aa8.19□□□□□ -1.1
RDM1-222ENST00000618511 A0A0G2JS52 829 aa8.18□□□□□ -1.1
RDM1-222ENST00000618511 HOXC9P31274 260 aa8.18□□□□□ -1.1
RDM1-222ENST00000618511 TIE1P35590 1138 aa8.18□□□□□ -1.1
RDM1-222ENST00000618511 MYT1Q01538 1121 aa8.18□□□□□ -1.1
RDM1-222ENST00000618511 ANKRD24Q8TF21 1146 aa8.18□□□□□ -1.1
RDM1-222ENST00000618511 CARD14Q9BXL6 1004 aa8.18□□□□□ -1.1
RDM1-222ENST00000618511 BCL11BQ9C0K0 894 aaPredicted RBP8.18□□□□□ -1.1
RDM1-222ENST00000618511 PCDHB13Q9Y5F0 798 aa8.18□□□□□ -1.1
RDM1-222ENST00000618511 FLT4P35916 1363 aa8.18□□□□□ -1.1
RDM1-222ENST00000618511 RGPD1P0DJD0 1748 aa8.17□□□□□ -1.1
RDM1-222ENST00000618511 BRWD3Q6RI45 1802 aa8.17□□□□□ -1.1
RDM1-222ENST00000618511 IL2RBP14784 551 aa8.17□□□□□ -1.1
RDM1-222ENST00000618511 MARCH10Q8NA82 808 aaPredicted RBP8.17□□□□□ -1.1
RDM1-222ENST00000618511 SMG6Q86US8 1419 aaKnown RBP8.17□□□□□ -1.1
RDM1-222ENST00000618511 TNS1Q9HBL0 1735 aaKnown RBP8.17□□□□□ -1.1
RDM1-222ENST00000618511 RGPD3A6NKT7 1758 aaPredicted RBP8.17□□□□□ -1.1
RDM1-222ENST00000618511 RGPD4Q7Z3J3 1758 aa8.17□□□□□ -1.1
RDM1-222ENST00000618511 EXOC5O00471 708 aa8.16□□□□□ -1.1
RDM1-222ENST00000618511 LRP5O75197 1615 aa8.16□□□□□ -1.1
RDM1-222ENST00000618511 CCER1Q8TC90 406 aaPredicted RBP8.16□□□□□ -1.1
RDM1-222ENST00000618511 SGIP1Q9BQI5 828 aa8.16□□□□□ -1.1
RDM1-222ENST00000618511 NSD3Q9BZ95 1437 aa8.16□□□□□ -1.1
RDM1-222ENST00000618511 USP35Q9P2H5 1018 aa8.16□□□□□ -1.1
RDM1-222ENST00000618511 MYOM1P52179 1685 aa8.15□□□□□ -1.1
RDM1-222ENST00000618511 FAM208AQ9UK61 1670 aaKnown RBP8.15□□□□□ -1.1
RDM1-222ENST00000618511 WASHC2AQ641Q2 1341 aa8.15□□□□□ -1.1
RDM1-222ENST00000618511 TTLL13PA6NNM8 815 aa8.15□□□□□ -1.1
RDM1-222ENST00000618511 TRIM37O94972 964 aa8.15□□□□□ -1.1
RDM1-222ENST00000618511 POTEJP0CG39 1038 aa8.15□□□□□ -1.1
RDM1-222ENST00000618511 CSB-PGBD3P0DP91 1061 aa8.15□□□□□ -1.1
RDM1-222ENST00000618511 VASPP50552 380 aaPredicted RBP8.15□□□□□ -1.1
RDM1-222ENST00000618511 EN1Q05925 392 aaPredicted RBP8.15□□□□□ -1.1
RDM1-222ENST00000618511 DCAF8Q5TAQ9 597 aa8.15□□□□□ -1.1
RDM1-222ENST00000618511 NPC1L1Q9UHC9 1359 aa8.14□□□□□ -1.11
RDM1-222ENST00000618511 APBA3O96018 575 aa8.14□□□□□ -1.11
RDM1-222ENST00000618511 HSPA5P11021 654 aaKnown RBP8.14□□□□□ -1.11
RDM1-222ENST00000618511 FAM182BQ5T319 152 aa8.14□□□□□ -1.11
RDM1-222ENST00000618511 IFNL1Q8IU54 200 aa8.14□□□□□ -1.11
RDM1-222ENST00000618511 NLRP2Q9NX02 1062 aa8.14□□□□□ -1.11
RDM1-222ENST00000618511 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.14□□□□□ -1.11
RDM1-222ENST00000618511 EZH2Q15910 746 aaKnown RBP8.13□□□□□ -1.11
RDM1-222ENST00000618511 KLHL34Q8N239 644 aa8.13□□□□□ -1.11
RDM1-222ENST00000618511 GGNBP2Q9H3C7 697 aa8.13□□□□□ -1.11
RDM1-222ENST00000618511 WNK3Q9BYP7 1800 aa8.13□□□□□ -1.11
RDM1-222ENST00000618511 ANKRD26Q9UPS8 1709 aa8.12□□□□□ -1.11
RDM1-222ENST00000618511 RREB1Q92766 1687 aa8.12□□□□□ -1.11
RDM1-222ENST00000618511 POTEFA5A3E0 1075 aa8.12□□□□□ -1.11
RDM1-222ENST00000618511 SOX12O15370 315 aa8.12□□□□□ -1.11
RDM1-222ENST00000618511 HMGB2P26583 209 aaKnown RBP8.12□□□□□ -1.11
RDM1-222ENST00000618511 AMPHP49418 695 aa8.12□□□□□ -1.11
RDM1-222ENST00000618511 MEGF6O75095 1541 aa8.12□□□□□ -1.11
RDM1-222ENST00000618511 PYGBP11216 843 aa8.11□□□□□ -1.11
RDM1-222ENST00000618511 ZBTB7CA1YPR0 619 aa8.1□□□□□ -1.11
RDM1-222ENST00000618511 RRS1Q15050 365 aaKnown RBP8.1□□□□□ -1.11
RDM1-222ENST00000618511 NKX1-1Q15270 411 aaPredicted RBP8.1□□□□□ -1.11
RDM1-222ENST00000618511 HSP90AB2PQ58FF8 381 aa8.1□□□□□ -1.11
RDM1-222ENST00000618511 AMER1Q5JTC6 1135 aaPredicted RBP8.1□□□□□ -1.11
RDM1-222ENST00000618511 SLC27A3Q5K4L6 730 aa8.1□□□□□ -1.11
RDM1-222ENST00000618511 NBPF14Q5TI25 921 aa8.1□□□□□ -1.11
RDM1-222ENST00000618511 NBPF6Q5VWK0 638 aa8.1□□□□□ -1.11
RDM1-222ENST00000618511 NBPF4Q96M43 638 aa8.1□□□□□ -1.11
RDM1-222ENST00000618511 POLKQ9UBT6 870 aa8.1□□□□□ -1.11
RDM1-222ENST00000618511 TRIM35Q9UPQ4 493 aa8.1□□□□□ -1.11
RDM1-222ENST00000618511 NHSQ6T4R5 1651 aa8.1□□□□□ -1.11
RDM1-222ENST00000618511 IGSF1Q8N6C5 1336 aa8.09□□□□□ -1.11
RDM1-222ENST00000618511 PCDH11XQ9BZA7 1347 aa8.09□□□□□ -1.11
RDM1-222ENST00000618511 PCDH11YQ9BZA8 1340 aa8.09□□□□□ -1.11
RDM1-222ENST00000618511 PER1O15534 1290 aaPredicted RBP8.09□□□□□ -1.11
RDM1-222ENST00000618511 TXNRD1Q16881 649 aa8.09□□□□□ -1.11
RDM1-222ENST00000618511 ZCRB1Q8TBF4 217 aaKnown RBP8.09□□□□□ -1.11
RDM1-222ENST00000618511 KDRP35968 1356 aa8.09□□□□□ -1.12
RDM1-222ENST00000618511 KIF7Q2M1P5 1343 aa8.08□□□□□ -1.12
RDM1-222ENST00000618511 PAPPAQ13219 1627 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms