RNA–Protein interactions for RNA: ENST00000618411.4

SRRT-217, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,893 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-217ENST00000618411 USP25Q9UHP3 1055 aa18.32■□□□□ 0.52
SRRT-217ENST00000618411 ATP7AQ04656 1500 aa18.32■□□□□ 0.52
SRRT-217ENST00000618411 ADCY5O95622 1261 aa18.32■□□□□ 0.52
SRRT-217ENST00000618411 ARAP3Q8WWN8 1544 aa18.32■□□□□ 0.52
SRRT-217ENST00000618411 IFT57Q9NWB7 429 aa18.32■□□□□ 0.52
SRRT-217ENST00000618411 KNDC1Q76NI1 1749 aa18.32■□□□□ 0.52
SRRT-217ENST00000618411 ZBTB7CA1YPR0 619 aa18.32■□□□□ 0.52
SRRT-217ENST00000618411 RPAP2Q8IXW5 612 aaPredicted RBP18.32■□□□□ 0.52
SRRT-217ENST00000618411 CABP2Q9NPB3 220 aa18.32■□□□□ 0.52
SRRT-217ENST00000618411 CDC42BPGQ6DT37 1551 aa18.31■□□□□ 0.52
SRRT-217ENST00000618411 OTUD7AQ8TE49 926 aaPredicted RBP18.31■□□□□ 0.52
SRRT-217ENST00000618411 RPGRIP1LQ68CZ1 1315 aa18.31■□□□□ 0.52
SRRT-217ENST00000618411 ANKRD26Q9UPS8 1709 aa18.31■□□□□ 0.52
SRRT-217ENST00000618411 FYB1O15117 783 aa18.31■□□□□ 0.52
SRRT-217ENST00000618411 FAM135BQ49AJ0 1406 aa18.3■□□□□ 0.52
SRRT-217ENST00000618411 CHGAP10645 457 aaKnown RBP18.3■□□□□ 0.52
SRRT-217ENST00000618411 KLHL34Q8N239 644 aa18.3■□□□□ 0.52
SRRT-217ENST00000618411 ANKRD7Q92527 254 aa18.3■□□□□ 0.52
SRRT-217ENST00000618411 ZNF853P0CG23 659 aa18.3■□□□□ 0.52
SRRT-217ENST00000618411 NFE2L2Q16236 605 aa18.3■□□□□ 0.52
SRRT-217ENST00000618411 TAF3Q5VWG9 929 aa18.3■□□□□ 0.52
SRRT-217ENST00000618411 LRRC7Q96NW7 1537 aa18.3■□□□□ 0.52
SRRT-217ENST00000618411 PRKAR2BP31323 418 aa18.29■□□□□ 0.52
SRRT-217ENST00000618411 CHAF1AQ13111 956 aaPredicted RBP18.29■□□□□ 0.52
SRRT-217ENST00000618411 TWISTNBQ3B726 338 aaPredicted RBP18.29■□□□□ 0.52
SRRT-217ENST00000618411 MPNDQ8N594 471 aa18.29■□□□□ 0.52
SRRT-217ENST00000618411 CCDC183Q5T5S1 534 aa18.28■□□□□ 0.52
SRRT-217ENST00000618411 C17orf53Q8N3J3 647 aaPredicted RBP18.28■□□□□ 0.52
SRRT-217ENST00000618411 FEZ1Q99689 392 aa18.28■□□□□ 0.52
SRRT-217ENST00000618411 GADD45BO75293 160 aaPredicted RBP18.28■□□□□ 0.52
SRRT-217ENST00000618411 TPM3P06753 285 aa18.28■□□□□ 0.52
SRRT-217ENST00000618411 USP48Q86UV5 1035 aa18.28■□□□□ 0.52
SRRT-217ENST00000618411 GLI2P10070 1586 aa18.28■□□□□ 0.52
SRRT-217ENST00000618411 ATP10DQ9P241 1426 aa18.28■□□□□ 0.52
SRRT-217ENST00000618411 TMEM87AQ8NBN3 555 aa18.28■□□□□ 0.52
SRRT-217ENST00000618411 KIAA1524Q8TCG1 905 aa18.28■□□□□ 0.52
SRRT-217ENST00000618411 MBIPQ9NS73 344 aa18.28■□□□□ 0.52
SRRT-217ENST00000618411 ARHGEF28Q8N1W1 1705 aaKnown RBP18.27■□□□□ 0.52
SRRT-217ENST00000618411 FAM177BA6PVY3 158 aa18.27■□□□□ 0.52
SRRT-217ENST00000618411 ELL2O00472 640 aaPredicted RBP18.27■□□□□ 0.52
SRRT-217ENST00000618411 KDM4AO75164 1064 aa18.27■□□□□ 0.52
SRRT-217ENST00000618411 TERF2IPQ9NYB0 399 aa18.27■□□□□ 0.52
SRRT-217ENST00000618411 ZFYVE9O95405 1425 aa18.27■□□□□ 0.52
SRRT-217ENST00000618411 LMTK2Q8IWU2 1503 aa18.27■□□□□ 0.51
SRRT-217ENST00000618411 CTIFO43310 598 aaKnown RBP18.27■□□□□ 0.51
SRRT-217ENST00000618411 WDR33Q9C0J8 1336 aaKnown RBP18.26■□□□□ 0.51
SRRT-217ENST00000618411 ATAD2Q6PL18 1390 aa18.26■□□□□ 0.51
SRRT-217ENST00000618411 ANAPC15P60006 121 aa18.26■□□□□ 0.51
SRRT-217ENST00000618411 SPDYE4A6NLX3 237 aa18.26■□□□□ 0.51
SRRT-217ENST00000618411 MX1P20591 662 aa18.26■□□□□ 0.51
SRRT-217ENST00000618411 OSBPL3Q9H4L5 887 aa18.26■□□□□ 0.51
SRRT-217ENST00000618411 UHRF1BP1LA0JNW5 1464 aa18.25■□□□□ 0.51
SRRT-217ENST00000618411 RTL1A6NKG5 1358 aa18.25■□□□□ 0.51
SRRT-217ENST00000618411 CEP85Q6P2H3 762 aa18.25■□□□□ 0.51
SRRT-217ENST00000618411 RIOK3O14730 519 aaKnown RBP18.25■□□□□ 0.51
SRRT-217ENST00000618411 MCCP23508 829 aa18.25■□□□□ 0.51
SRRT-217ENST00000618411 THUMPD2Q9BTF0 503 aaKnown RBP18.25■□□□□ 0.51
SRRT-217ENST00000618411 ASXL2Q76L83 1435 aa18.25■□□□□ 0.51
SRRT-217ENST00000618411 HCLS1P14317 486 aaPredicted RBP18.24■□□□□ 0.51
SRRT-217ENST00000618411 GDPD2Q9HCC8 539 aa18.24■□□□□ 0.51
SRRT-217ENST00000618411 SMARCA5O60264 1052 aaPredicted RBP18.24■□□□□ 0.51
SRRT-217ENST00000618411 C8orf58Q8NAV2 365 aa18.24■□□□□ 0.51
SRRT-217ENST00000618411 PHACTR3Q96KR7 559 aa18.23■□□□□ 0.51
SRRT-217ENST00000618411 U2AF2P26368 475 aaKnown RBP eCLIP18.23■□□□□ 0.513e-8■■■□□ 16.6
SRRT-217ENST00000618411 IL17RAQ96F46 866 aa18.23■□□□□ 0.51
SRRT-217ENST00000618411 OGFRQ9NZT2 677 aa18.23■□□□□ 0.51
SRRT-217ENST00000618411 ZCCHC11Q5TAX3 1644 aaKnown RBP18.22■□□□□ 0.51
SRRT-217ENST00000618411 SRPK2P78362 688 aaKnown RBP18.22■□□□□ 0.51
SRRT-217ENST00000618411 SYCP1Q15431 976 aa18.21■□□□□ 0.51
SRRT-217ENST00000618411 RGS12O14924 1447 aa18.21■□□□□ 0.5
SRRT-217ENST00000618411 PDE1AP54750 535 aa18.2■□□□□ 0.5
SRRT-217ENST00000618411 BBXQ8WY36 941 aaPredicted RBP18.2■□□□□ 0.5
SRRT-217ENST00000618411 ESYT1Q9BSJ8 1104 aa18.2■□□□□ 0.5
SRRT-217ENST00000618411 TCHHQ07283 1943 aa18.2■□□□□ 0.5
SRRT-217ENST00000618411 UBE2HP62256 183 aa18.2■□□□□ 0.5
SRRT-217ENST00000618411 LMOD3Q0VAK6 560 aa18.2■□□□□ 0.5
SRRT-217ENST00000618411 GOLGA6L6A8MZA4 724 aa18.2■□□□□ 0.5
SRRT-217ENST00000618411 KCNF1Q9H3M0 494 aa18.2■□□□□ 0.5
SRRT-217ENST00000618411 PYCARDQ9ULZ3 195 aa18.2■□□□□ 0.5
SRRT-217ENST00000618411 APBB1O00213 710 aa18.19■□□□□ 0.5
SRRT-217ENST00000618411 GABPB1Q06547 395 aaPredicted RBP18.19■□□□□ 0.5
SRRT-217ENST00000618411 FOXD4L6Q3SYB3 417 aaPredicted RBP18.19■□□□□ 0.5
SRRT-217ENST00000618411 FOXD4L3Q6VB84 417 aaPredicted RBP18.19■□□□□ 0.5
SRRT-217ENST00000618411 RPAP1Q9BWH6 1393 aaPredicted RBP18.19■□□□□ 0.5
SRRT-217ENST00000618411 FUCA2Q9BTY2 467 aa18.19■□□□□ 0.5
SRRT-217ENST00000618411 CD163L1Q9NR16 1453 aa18.19■□□□□ 0.5
SRRT-217ENST00000618411 VGFO15240 615 aaPredicted RBP18.18■□□□□ 0.5
SRRT-217ENST00000618411 SRCIN1Q9C0H9 1055 aa18.18■□□□□ 0.5
SRRT-217ENST00000618411 PALD1Q9ULE6 856 aa18.18■□□□□ 0.5
SRRT-217ENST00000618411 ARHGEF40Q8TER5 1519 aa18.18■□□□□ 0.5
SRRT-217ENST00000618411 HMMRO75330 724 aa18.18■□□□□ 0.5
SRRT-217ENST00000618411 GTF2E1P29083 439 aaPredicted RBP18.18■□□□□ 0.5
SRRT-217ENST00000618411 CAMSAP1Q5T5Y3 1602 aa18.18■□□□□ 0.5
SRRT-217ENST00000618411 SSH2Q76I76 1423 aa18.18■□□□□ 0.5
SRRT-217ENST00000618411 HAP1P54257 671 aaPredicted RBP18.17■□□□□ 0.5
SRRT-217ENST00000618411 HDGFL2Q7Z4V5 671 aaPredicted RBP18.17■□□□□ 0.5
SRRT-217ENST00000618411 ABCA9Q8IUA7 1624 aa18.17■□□□□ 0.5
SRRT-217ENST00000618411 SAFB2Q14151 953 aaKnown RBP eCLIP18.16■□□□□ 0.5
SRRT-217ENST00000618411 ZNF771Q7L3S4 317 aaPredicted RBP18.16■□□□□ 0.5
SRRT-217ENST00000618411 HMOX1P09601 288 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 135.9 ms