RNA–Protein interactions for RNA: ENST00000618363.4

SHANK2-221, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 3

Gene SHANK2, Length 434 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-221ENST00000618363 SYTL4Q96C24 671 aaPredicted RBP16.03■□□□□ 0.16
SHANK2-221ENST00000618363 EMILIN1Q9Y6C2 1016 aa16.03■□□□□ 0.16
SHANK2-221ENST00000618363 USHBP1Q8N6Y0 703 aa16.02■□□□□ 0.16
SHANK2-221ENST00000618363 TXNRD1Q16881 649 aa16.01■□□□□ 0.15
SHANK2-221ENST00000618363 STK32BQ9NY57 414 aa16.01■□□□□ 0.15
SHANK2-221ENST00000618363 RREB1Q92766 1687 aa16.01■□□□□ 0.15
SHANK2-221ENST00000618363 MORC1Q86VD1 984 aa16■□□□□ 0.15
SHANK2-221ENST00000618363 RGPD3A6NKT7 1758 aaPredicted RBP16■□□□□ 0.15
SHANK2-221ENST00000618363 RGPD4Q7Z3J3 1758 aa16■□□□□ 0.15
SHANK2-221ENST00000618363 NSD2O96028 1365 aa16■□□□□ 0.15
SHANK2-221ENST00000618363 NUP188Q5SRE5 1749 aa15.99■□□□□ 0.15
SHANK2-221ENST00000618363 WASHC2AQ641Q2 1341 aa15.99■□□□□ 0.15
SHANK2-221ENST00000618363 RGPD2P0DJD1 1756 aa15.98■□□□□ 0.15
SHANK2-221ENST00000618363 POLKQ9UBT6 870 aa15.98■□□□□ 0.15
SHANK2-221ENST00000618363 MAP2P11137 1827 aaKnown RBP15.98■□□□□ 0.15
SHANK2-221ENST00000618363 NHSQ6T4R5 1651 aa15.98■□□□□ 0.15
SHANK2-221ENST00000618363 PCDH11XQ9BZA7 1347 aa15.97■□□□□ 0.15
SHANK2-221ENST00000618363 PCDH11YQ9BZA8 1340 aa15.97■□□□□ 0.15
SHANK2-221ENST00000618363 PRIM1P49642 420 aaKnown RBP15.97■□□□□ 0.15
SHANK2-221ENST00000618363 LRP5O75197 1615 aa15.97■□□□□ 0.15
SHANK2-221ENST00000618363 MEGF6O75095 1541 aa15.96■□□□□ 0.15
SHANK2-221ENST00000618363 PROM2Q8N271 834 aa15.96■□□□□ 0.15
SHANK2-221ENST00000618363 SPON1Q9HCB6 807 aa15.96■□□□□ 0.15
SHANK2-221ENST00000618363 PPP1R1BQ9UD71 204 aaPredicted RBP15.96■□□□□ 0.15
SHANK2-221ENST00000618363 SPG7Q9UQ90 795 aa15.96■□□□□ 0.15
SHANK2-221ENST00000618363 KIF7Q2M1P5 1343 aa15.95■□□□□ 0.14
SHANK2-221ENST00000618363 ANKRD26Q9UPS8 1709 aa15.94■□□□□ 0.14
SHANK2-221ENST00000618363 HMGB2P26583 209 aaKnown RBP15.94■□□□□ 0.14
SHANK2-221ENST00000618363 SLC15A2Q16348 729 aa15.94■□□□□ 0.14
SHANK2-221ENST00000618363 SLC27A3Q5K4L6 730 aa15.93■□□□□ 0.14
SHANK2-221ENST00000618363 EYA1Q99502 592 aa15.93■□□□□ 0.14
SHANK2-221ENST00000618363 ANO8Q9HCE9 1232 aaPredicted RBP15.93■□□□□ 0.14
SHANK2-221ENST00000618363 BTAF1O14981 1849 aa15.92■□□□□ 0.14
SHANK2-221ENST00000618363 EIF4A2Q14240 407 aaKnown RBP15.92■□□□□ 0.14
SHANK2-221ENST00000618363 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.9■□□□□ 0.145e-8■□□□□ 11
SHANK2-221ENST00000618363 MPRIPQ6WCQ1 1025 aa15.89■□□□□ 0.13
SHANK2-221ENST00000618363 DOT1LQ8TEK3 1739 aa15.88■□□□□ 0.13
SHANK2-221ENST00000618363 DCAF8L1A6NGE4 600 aa15.88■□□□□ 0.13
SHANK2-221ENST00000618363 CYP27B1O15528 508 aa15.88■□□□□ 0.13
SHANK2-221ENST00000618363 ZBTB7AO95365 584 aa15.88■□□□□ 0.13
SHANK2-221ENST00000618363 IFNL2Q8IZJ0 200 aa15.88■□□□□ 0.13
SHANK2-221ENST00000618363 CCNL1Q9UK58 526 aaPredicted RBP15.88■□□□□ 0.13
SHANK2-221ENST00000618363 SRCAPQ6ZRS2 3230 aa15.88■□□□□ 0.13
SHANK2-221ENST00000618363 PLEKHO1Q53GL0 409 aaPredicted RBP15.87■□□□□ 0.13
SHANK2-221ENST00000618363 AMER1Q5JTC6 1135 aaPredicted RBP15.87■□□□□ 0.13
SHANK2-221ENST00000618363 CC2D1BQ5T0F9 858 aaKnown RBP15.87■□□□□ 0.13
SHANK2-221ENST00000618363 SMARCC1Q92922 1105 aaPredicted RBP15.87■□□□□ 0.13
SHANK2-221ENST00000618363 SHANK3Q9BYB0 1731 aa15.86■□□□□ 0.13
SHANK2-221ENST00000618363 CNGB1Q14028 1251 aaPredicted RBP15.86■□□□□ 0.13
SHANK2-221ENST00000618363 LRRC4BQ9NT99 713 aa15.86■□□□□ 0.13
SHANK2-221ENST00000618363 TFCP2L1Q9NZI6 479 aa15.86■□□□□ 0.13
SHANK2-221ENST00000618363 ATF5Q9Y2D1 282 aaPredicted RBP15.86■□□□□ 0.13
SHANK2-221ENST00000618363 HSP90AB1P08238 724 aaKnown RBP15.85■□□□□ 0.13
SHANK2-221ENST00000618363 AMOTQ4VCS5 1084 aa15.85■□□□□ 0.13
SHANK2-221ENST00000618363 MTFR1LQ9H019 292 aa15.85■□□□□ 0.13
SHANK2-221ENST00000618363 RNF216Q9NWF9 866 aaPredicted RBP15.85■□□□□ 0.13
SHANK2-221ENST00000618363 TMOD3Q9NYL9 352 aa15.85■□□□□ 0.13
SHANK2-221ENST00000618363 IGSF1Q8N6C5 1336 aa15.85■□□□□ 0.13
SHANK2-221ENST00000618363 NCAPD2Q15021 1401 aa15.85■□□□□ 0.13
SHANK2-221ENST00000618363 NKX1-1Q15270 411 aaPredicted RBP15.84■□□□□ 0.13
SHANK2-221ENST00000618363 PHKG2P15735 406 aa15.83■□□□□ 0.12
SHANK2-221ENST00000618363 MTHFSP49914 203 aa15.83■□□□□ 0.12
SHANK2-221ENST00000618363 KCNQ4P56696 695 aa15.83■□□□□ 0.12
SHANK2-221ENST00000618363 C1orf141Q5JVX7 400 aa15.83■□□□□ 0.12
SHANK2-221ENST00000618363 PDGFDQ9GZP0 370 aaPredicted RBP15.83■□□□□ 0.12
SHANK2-221ENST00000618363 PLEKHG2Q9H7P9 1386 aa15.83■□□□□ 0.12
SHANK2-221ENST00000618363 PKD1L3Q7Z443 1732 aa15.82■□□□□ 0.12
SHANK2-221ENST00000618363 PER1O15534 1290 aaPredicted RBP15.82■□□□□ 0.12
SHANK2-221ENST00000618363 ZNF827Q17R98 1081 aa15.82■□□□□ 0.12
SHANK2-221ENST00000618363 SULT6B1Q6IMI4 303 aa15.82■□□□□ 0.12
SHANK2-221ENST00000618363 SLC16A10Q8TF71 515 aa15.82■□□□□ 0.12
SHANK2-221ENST00000618363 AKT1S1Q96B36 256 aa15.82■□□□□ 0.12
SHANK2-221ENST00000618363 PALLDQ8WX93 1383 aa15.82■□□□□ 0.12
SHANK2-221ENST00000618363 ZNF530Q6P9A1 599 aaPredicted RBP15.81■□□□□ 0.12
SHANK2-221ENST00000618363 POLD1P28340 1107 aa15.8■□□□□ 0.12
SHANK2-221ENST00000618363 IL13P35225 146 aa15.8■□□□□ 0.12
SHANK2-221ENST00000618363 PIGBQ92521 554 aa15.8■□□□□ 0.12
SHANK2-221ENST00000618363 CASZ1Q86V15 1759 aa15.8■□□□□ 0.12
SHANK2-221ENST00000618363 DIAPH1O60610 1272 aaKnown RBP15.79■□□□□ 0.12
SHANK2-221ENST00000618363 DCAF5Q96JK2 942 aa15.79■□□□□ 0.12
SHANK2-221ENST00000618363 LY75O60449 1722 aa15.79■□□□□ 0.12
SHANK2-221ENST00000618363 NPC1L1Q9UHC9 1359 aa15.78■□□□□ 0.12
SHANK2-221ENST00000618363 ERVV-2B6SEH9 535 aa15.78■□□□□ 0.12
SHANK2-221ENST00000618363 AEBP1Q8IUX7 1158 aa15.78■□□□□ 0.12
SHANK2-221ENST00000618363 FLAD1Q8NFF5 587 aa15.78■□□□□ 0.12
SHANK2-221ENST00000618363 PAPPAQ13219 1627 aa15.78■□□□□ 0.12
SHANK2-221ENST00000618363 CABP4P57796 275 aa15.77■□□□□ 0.12
SHANK2-221ENST00000618363 AK7Q96M32 723 aa15.77■□□□□ 0.12
SHANK2-221ENST00000618363 CFAP53Q96M91 514 aa15.77■□□□□ 0.12
SHANK2-221ENST00000618363 ARXQ96QS3 562 aa15.77■□□□□ 0.12
SHANK2-221ENST00000618363 ITGB4P16144 1822 aa15.77■□□□□ 0.11
SHANK2-221ENST00000618363 PNPLA7Q6ZV29 1317 aa15.76■□□□□ 0.11
SHANK2-221ENST00000618363 PTGER2P43116 358 aa15.76■□□□□ 0.11
SHANK2-221ENST00000618363 LOC102724428A0A0B4J2F2 783 aa15.75■□□□□ 0.11
SHANK2-221ENST00000618363 HMOX1P09601 288 aa15.75■□□□□ 0.11
SHANK2-221ENST00000618363 ATP6V1AP38606 617 aa15.75■□□□□ 0.11
SHANK2-221ENST00000618363 SIK1P57059 783 aa15.75■□□□□ 0.11
SHANK2-221ENST00000618363 U2SURPO15042 1029 aaKnown RBP15.74■□□□□ 0.11
SHANK2-221ENST00000618363 HOXD11P31277 338 aaPredicted RBP15.74■□□□□ 0.11
SHANK2-221ENST00000618363 KLHL34Q8N239 644 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms