RNA–Protein interactions for RNA: ENST00000618361.4

CBWD1-227, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-227ENST00000618361 KIF3CO14782 793 aa11.19□□□□□ -0.62
CBWD1-227ENST00000618361 SYTL4Q96C24 671 aaPredicted RBP11.19□□□□□ -0.62
CBWD1-227ENST00000618361 KCNQ4P56696 695 aa11.18□□□□□ -0.62
CBWD1-227ENST00000618361 IP6K1Q92551 441 aa11.18□□□□□ -0.62
CBWD1-227ENST00000618361 USP54Q70EL1 1684 aa11.17□□□□□ -0.62
CBWD1-227ENST00000618361 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.17□□□□□ -0.62
CBWD1-227ENST00000618361 DNAJC5GQ8N7S2 189 aa11.17□□□□□ -0.62
CBWD1-227ENST00000618361 USP47Q96K76 1375 aa11.16□□□□□ -0.62
CBWD1-227ENST00000618361 SBNO2Q9Y2G9 1366 aa11.16□□□□□ -0.62
CBWD1-227ENST00000618361 TOMM70O94826 608 aa11.16□□□□□ -0.62
CBWD1-227ENST00000618361 NME9Q86XW9 330 aa11.16□□□□□ -0.62
CBWD1-227ENST00000618361 ZCRB1Q8TBF4 217 aaKnown RBP11.16□□□□□ -0.62
CBWD1-227ENST00000618361 LY75O60449 1722 aa11.15□□□□□ -0.62
CBWD1-227ENST00000618361 MSL1Q68DK7 614 aa11.15□□□□□ -0.62
CBWD1-227ENST00000618361 TUBGCP6Q96RT7 1819 aa11.14□□□□□ -0.63
CBWD1-227ENST00000618361 CGNL1Q0VF96 1302 aa11.14□□□□□ -0.63
CBWD1-227ENST00000618361 CAPN15O75808 1086 aa11.14□□□□□ -0.63
CBWD1-227ENST00000618361 HDGFL2Q7Z4V5 671 aaPredicted RBP11.14□□□□□ -0.63
CBWD1-227ENST00000618361 EDC4Q6P2E9 1401 aaKnown RBP11.14□□□□□ -0.63
CBWD1-227ENST00000618361 CD163L1Q9NR16 1453 aa11.13□□□□□ -0.63
CBWD1-227ENST00000618361 IGSF1Q8N6C5 1336 aa11.13□□□□□ -0.63
CBWD1-227ENST00000618361 MON2Q7Z3U7 1717 aa11.13□□□□□ -0.63
CBWD1-227ENST00000618361 PRELPP51888 382 aa11.13□□□□□ -0.63
CBWD1-227ENST00000618361 TNS4Q8IZW8 715 aa11.13□□□□□ -0.63
CBWD1-227ENST00000618361 COL13A1Q5TAT6 717 aaPredicted RBP11.12□□□□□ -0.63
CBWD1-227ENST00000618361 FAM208AQ9UK61 1670 aaKnown RBP11.11□□□□□ -0.63
CBWD1-227ENST00000618361 NSD3Q9BZ95 1437 aa11.11□□□□□ -0.63
CBWD1-227ENST00000618361 C16orf71Q8IYS4 520 aaPredicted RBP11.11□□□□□ -0.63
CBWD1-227ENST00000618361 L3MBTL2Q969R5 705 aa11.11□□□□□ -0.63
CBWD1-227ENST00000618361 PUS7Q96PZ0 661 aaKnown RBP11.11□□□□□ -0.63
CBWD1-227ENST00000618361 TERF2IPQ9NYB0 399 aa11.11□□□□□ -0.63
CBWD1-227ENST00000618361 ROCK2O75116 1388 aaKnown RBP11.11□□□□□ -0.63
CBWD1-227ENST00000618361 LTN1O94822 1766 aa11.11□□□□□ -0.63
CBWD1-227ENST00000618361 HOXC9P31274 260 aa11.1□□□□□ -0.63
CBWD1-227ENST00000618361 JMYQ8N9B5 988 aa11.1□□□□□ -0.63
CBWD1-227ENST00000618361 SMARCC1Q92922 1105 aaPredicted RBP11.1□□□□□ -0.63
CBWD1-227ENST00000618361 KLRG1Q96E93 195 aa11.1□□□□□ -0.63
CBWD1-227ENST00000618361 LTV1Q96GA3 475 aaPredicted RBP11.1□□□□□ -0.63
CBWD1-227ENST00000618361 CICQ96RK0 1608 aaPredicted RBP11.09□□□□□ -0.63
CBWD1-227ENST00000618361 DOT1LQ8TEK3 1739 aa11.09□□□□□ -0.63
CBWD1-227ENST00000618361 PALLDQ8WX93 1383 aa11.09□□□□□ -0.63
CBWD1-227ENST00000618361 SSFA2P28290 1259 aa11.09□□□□□ -0.63
CBWD1-227ENST00000618361 TMC1Q8TDI8 760 aa11.09□□□□□ -0.63
CBWD1-227ENST00000618361 AK7Q96M32 723 aa11.09□□□□□ -0.63
CBWD1-227ENST00000618361 SLC12A5Q9H2X9 1139 aa11.09□□□□□ -0.63
CBWD1-227ENST00000618361 MEGF6O75095 1541 aa11.09□□□□□ -0.63
CBWD1-227ENST00000618361 MAP3K19Q56UN5 1328 aa11.09□□□□□ -0.63
CBWD1-227ENST00000618361 KAT6BQ8WYB5 2073 aa11.08□□□□□ -0.63
CBWD1-227ENST00000618361 AMPHP49418 695 aa11.08□□□□□ -0.64
CBWD1-227ENST00000618361 TGFB2P61812 414 aa11.08□□□□□ -0.64
CBWD1-227ENST00000618361 RBM46Q8TBY0 533 aaKnown RBP11.08□□□□□ -0.64
CBWD1-227ENST00000618361 A0A1W2PP64 1363 aa11.07□□□□□ -0.64
CBWD1-227ENST00000618361 RTL1A6NKG5 1358 aa11.07□□□□□ -0.64
CBWD1-227ENST00000618361 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.07□□□□□ -0.64
CBWD1-227ENST00000618361 FSTL1Q12841 308 aa11.07□□□□□ -0.64
CBWD1-227ENST00000618361 RAPGEF4Q8WZA2 1011 aa11.07□□□□□ -0.64
CBWD1-227ENST00000618361 COG3Q96JB2 828 aa11.07□□□□□ -0.64
CBWD1-227ENST00000618361 PCDH11XQ9BZA7 1347 aa11.07□□□□□ -0.64
CBWD1-227ENST00000618361 PCDH11YQ9BZA8 1340 aa11.07□□□□□ -0.64
CBWD1-227ENST00000618361 C5P01031 1676 aa11.06□□□□□ -0.64
CBWD1-227ENST00000618361 TATP17735 454 aaPredicted RBP11.06□□□□□ -0.64
CBWD1-227ENST00000618361 NBPF6Q5VWK0 638 aa11.06□□□□□ -0.64
CBWD1-227ENST00000618361 NBPF4Q96M43 638 aa11.06□□□□□ -0.64
CBWD1-227ENST00000618361 MPRIPQ6WCQ1 1025 aa11.05□□□□□ -0.64
CBWD1-227ENST00000618361 AMIGO3Q86WK7 504 aa11.05□□□□□ -0.64
CBWD1-227ENST00000618361 WWC3Q9ULE0 1092 aa11.05□□□□□ -0.64
CBWD1-227ENST00000618361 PHF14O94880 888 aa11.04□□□□□ -0.64
CBWD1-227ENST00000618361 ARHGAP27Q6ZUM4 889 aa11.04□□□□□ -0.64
CBWD1-227ENST00000618361 NMRK2Q9NPI5 230 aa11.04□□□□□ -0.64
CBWD1-227ENST00000618361 C4BP0C0L5 1744 aa11.04□□□□□ -0.64
CBWD1-227ENST00000618361 PLEKHG2Q9H7P9 1386 aa11.03□□□□□ -0.64
CBWD1-227ENST00000618361 SMG6Q86US8 1419 aaKnown RBP11.03□□□□□ -0.64
CBWD1-227ENST00000618361 PXDNLA1KZ92 1463 aa11.03□□□□□ -0.64
CBWD1-227ENST00000618361 C10orf71Q711Q0 1435 aa11.02□□□□□ -0.64
CBWD1-227ENST00000618361 LOC102724428A0A0B4J2F2 783 aa11.02□□□□□ -0.65
CBWD1-227ENST00000618361 SLC24A1O60721 1099 aa11.02□□□□□ -0.65
CBWD1-227ENST00000618361 MMP10P09238 476 aa11.02□□□□□ -0.65
CBWD1-227ENST00000618361 SIK1P57059 783 aa11.02□□□□□ -0.65
CBWD1-227ENST00000618361 NKX1-1Q15270 411 aaPredicted RBP11.02□□□□□ -0.65
CBWD1-227ENST00000618361 NLGN1Q8N2Q7 840 aa11.02□□□□□ -0.65
CBWD1-227ENST00000618361 PIGBQ92521 554 aa11.02□□□□□ -0.65
CBWD1-227ENST00000618361 BCS1LQ9Y276 419 aa11.02□□□□□ -0.65
CBWD1-227ENST00000618361 TAF1LQ8IZX4 1826 aa11.01□□□□□ -0.65
CBWD1-227ENST00000618361 CYP27B1O15528 508 aa11.01□□□□□ -0.65
CBWD1-227ENST00000618361 LINC00116Q8NCU8 138 aa11.01□□□□□ -0.65
CBWD1-227ENST00000618361 KDM2BQ8NHM5 1336 aa11.01□□□□□ -0.65
CBWD1-227ENST00000618361 INSRP06213 1382 aa11.01□□□□□ -0.65
CBWD1-227ENST00000618361 KIF24Q5T7B8 1368 aa11.01□□□□□ -0.65
CBWD1-227ENST00000618361 WDR90Q96KV7 1748 aa11.01□□□□□ -0.65
CBWD1-227ENST00000618361 TOGARAM1Q9Y4F4 1720 aa11.01□□□□□ -0.65
CBWD1-227ENST00000618361 FBLN1P23142 703 aa11□□□□□ -0.65
CBWD1-227ENST00000618361 HTRA3P83110 453 aa11□□□□□ -0.65
CBWD1-227ENST00000618361 USHBP1Q8N6Y0 703 aa11□□□□□ -0.65
CBWD1-227ENST00000618361 CARD11Q9BXL7 1154 aa11□□□□□ -0.65
CBWD1-227ENST00000618361 A0A0G2JLW4 131 aa10.99□□□□□ -0.65
CBWD1-227ENST00000618361 GNPATO15228 680 aa10.99□□□□□ -0.65
CBWD1-227ENST00000618361 FCHSD2O94868 740 aa10.99□□□□□ -0.65
CBWD1-227ENST00000618361 TMF1P82094 1093 aa10.99□□□□□ -0.65
CBWD1-227ENST00000618361 RRS1Q15050 365 aaKnown RBP10.99□□□□□ -0.65
CBWD1-227ENST00000618361 C9orf131Q5VYM1 1079 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms