RNA–Protein interactions for RNA: ENST00000617757.1

TARDBP-219, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 434 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-219ENST00000617757 CARD10Q9BWT7 1032 aa10.64□□□□□ -0.71
TARDBP-219ENST00000617757 RRP7AQ9Y3A4 280 aaKnown RBP10.64□□□□□ -0.71
TARDBP-219ENST00000617757 NEUROD2Q15784 382 aa10.63□□□□□ -0.71
TARDBP-219ENST00000617757 MTHFSDQ2M296 383 aaKnown RBP10.63□□□□□ -0.71
TARDBP-219ENST00000617757 FNBP4Q8N3X1 1017 aaPredicted RBP10.63□□□□□ -0.71
TARDBP-219ENST00000617757 MEGF6O75095 1541 aa10.63□□□□□ -0.71
TARDBP-219ENST00000617757 SCN11AQ9UI33 1791 aa10.62□□□□□ -0.71
TARDBP-219ENST00000617757 TATP17735 454 aaPredicted RBP10.62□□□□□ -0.71
TARDBP-219ENST00000617757 RIPK4P57078 832 aa10.62□□□□□ -0.71
TARDBP-219ENST00000617757 CCDC27Q2M243 656 aa10.62□□□□□ -0.71
TARDBP-219ENST00000617757 MEX3CQ5U5Q3 659 aaKnown RBP10.62□□□□□ -0.71
TARDBP-219ENST00000617757 UNC5CLQ8IV45 518 aa10.62□□□□□ -0.71
TARDBP-219ENST00000617757 PLEKHG2Q9H7P9 1386 aa10.62□□□□□ -0.71
TARDBP-219ENST00000617757 ZNF521Q96K83 1311 aa10.61□□□□□ -0.71
TARDBP-219ENST00000617757 WWC1Q8IX03 1113 aa10.61□□□□□ -0.71
TARDBP-219ENST00000617757 RAPGEF4Q8WZA2 1011 aa10.61□□□□□ -0.71
TARDBP-219ENST00000617757 TRIM35Q9UPQ4 493 aa10.61□□□□□ -0.71
TARDBP-219ENST00000617757 ADAMTS7Q9UKP4 1686 aa10.6□□□□□ -0.71
TARDBP-219ENST00000617757 OVOS2A0A0G2JMS6 1433 aa10.6□□□□□ -0.71
TARDBP-219ENST00000617757 SIPA1L3O60292 1781 aaPredicted RBP10.6□□□□□ -0.71
TARDBP-219ENST00000617757 LRRC37A3O60309 1634 aa10.6□□□□□ -0.71
TARDBP-219ENST00000617757 AMOTQ4VCS5 1084 aa10.6□□□□□ -0.71
TARDBP-219ENST00000617757 PLEKHO1Q53GL0 409 aaPredicted RBP10.6□□□□□ -0.71
TARDBP-219ENST00000617757 GAS2L2Q8NHY3 880 aa10.6□□□□□ -0.71
TARDBP-219ENST00000617757 USP35Q9P2H5 1018 aa10.6□□□□□ -0.71
TARDBP-219ENST00000617757 USP21Q9UK80 565 aa10.6□□□□□ -0.71
TARDBP-219ENST00000617757 AFF2P51816 1311 aa10.59□□□□□ -0.71
TARDBP-219ENST00000617757 SPATA31A1Q5TZJ5 1347 aa10.59□□□□□ -0.71
TARDBP-219ENST00000617757 SPATA31A5Q5VU36 1347 aa10.59□□□□□ -0.71
TARDBP-219ENST00000617757 SPATA31A7Q8IWB4 1347 aa10.59□□□□□ -0.71
TARDBP-219ENST00000617757 DISP2A7MBM2 1401 aa10.59□□□□□ -0.71
TARDBP-219ENST00000617757 IL2RBP14784 551 aa10.59□□□□□ -0.71
TARDBP-219ENST00000617757 PDE3BQ13370 1112 aa10.59□□□□□ -0.71
TARDBP-219ENST00000617757 VPS72Q15906 364 aa10.59□□□□□ -0.71
TARDBP-219ENST00000617757 GLI3P10071 1580 aa10.59□□□□□ -0.71
TARDBP-219ENST00000617757 LMOD3Q0VAK6 560 aa10.58□□□□□ -0.72
TARDBP-219ENST00000617757 WDR63Q8IWG1 891 aa10.58□□□□□ -0.72
TARDBP-219ENST00000617757 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.58□□□□□ -0.72
TARDBP-219ENST00000617757 SPG7Q9UQ90 795 aa10.58□□□□□ -0.72
TARDBP-219ENST00000617757 THRAP3Q9Y2W1 955 aaKnown RBP10.58□□□□□ -0.72
TARDBP-219ENST00000617757 MAP3K5Q99683 1374 aa10.57□□□□□ -0.72
TARDBP-219ENST00000617757 GNAT3A8MTJ3 354 aa10.57□□□□□ -0.72
TARDBP-219ENST00000617757 HTATSF1O43719 755 aaKnown RBP10.57□□□□□ -0.72
TARDBP-219ENST00000617757 GOLGA2Q08379 1002 aa10.57□□□□□ -0.72
TARDBP-219ENST00000617757 AKAP4Q5JQC9 854 aa10.57□□□□□ -0.72
TARDBP-219ENST00000617757 ZNF530Q6P9A1 599 aaPredicted RBP10.57□□□□□ -0.72
TARDBP-219ENST00000617757 CDCA7LQ96GN5 454 aa10.57□□□□□ -0.72
TARDBP-219ENST00000617757 CCDC9Q9Y3X0 531 aaKnown RBP10.57□□□□□ -0.72
TARDBP-219ENST00000617757 THSD7AQ9UPZ6 1657 aa10.57□□□□□ -0.72
TARDBP-219ENST00000617757 ITGB4P16144 1822 aa10.56□□□□□ -0.72
TARDBP-219ENST00000617757 CENPBP07199 599 aaPredicted RBP10.56□□□□□ -0.72
TARDBP-219ENST00000617757 DCTN1Q14203 1278 aa10.56□□□□□ -0.72
TARDBP-219ENST00000617757 BARGINQ6ZT62 677 aa10.56□□□□□ -0.72
TARDBP-219ENST00000617757 ZCRB1Q8TBF4 217 aaKnown RBP10.56□□□□□ -0.72
TARDBP-219ENST00000617757 SPINK5Q9NQ38 1064 aaPredicted RBP10.56□□□□□ -0.72
TARDBP-219ENST00000617757 KDM3BQ7LBC6 1761 aa10.56□□□□□ -0.72
TARDBP-219ENST00000617757 ATRNO75882 1429 aa10.56□□□□□ -0.72
TARDBP-219ENST00000617757 TOGARAM1Q9Y4F4 1720 aa10.55□□□□□ -0.72
TARDBP-219ENST00000617757 PHKG2P15735 406 aa10.55□□□□□ -0.72
TARDBP-219ENST00000617757 SLFN5Q08AF3 891 aa10.55□□□□□ -0.72
TARDBP-219ENST00000617757 C1orf141Q5JVX7 400 aa10.55□□□□□ -0.72
TARDBP-219ENST00000617757 MCM10Q7L590 875 aa10.55□□□□□ -0.72
TARDBP-219ENST00000617757 TRMT2AQ8IZ69 625 aaKnown RBP10.55□□□□□ -0.72
TARDBP-219ENST00000617757 IFNL2Q8IZJ0 200 aa10.55□□□□□ -0.72
TARDBP-219ENST00000617757 IL17REQ8NFR9 667 aa10.55□□□□□ -0.72
TARDBP-219ENST00000617757 RTF1Q92541 710 aaKnown RBP10.55□□□□□ -0.72
TARDBP-219ENST00000617757 THUMPD2Q9BTF0 503 aaKnown RBP10.55□□□□□ -0.72
TARDBP-219ENST00000617757 CDCA7Q9BWT1 371 aaPredicted RBP10.55□□□□□ -0.72
TARDBP-219ENST00000617757 RNF39Q9H2S5 420 aa10.55□□□□□ -0.72
TARDBP-219ENST00000617757 TRPC5Q9UL62 973 aaPredicted RBP10.55□□□□□ -0.72
TARDBP-219ENST00000617757 IL16Q14005 1332 aa10.55□□□□□ -0.72
TARDBP-219ENST00000617757 BRWD3Q6RI45 1802 aa10.54□□□□□ -0.72
TARDBP-219ENST00000617757 CYP27B1O15528 508 aa10.54□□□□□ -0.72
TARDBP-219ENST00000617757 CACNB1Q02641 598 aaPredicted RBP10.54□□□□□ -0.72
TARDBP-219ENST00000617757 PCDH11XQ9BZA7 1347 aa10.54□□□□□ -0.72
TARDBP-219ENST00000617757 PCDH11YQ9BZA8 1340 aa10.54□□□□□ -0.72
TARDBP-219ENST00000617757 CEMIPQ8WUJ3 1361 aa10.53□□□□□ -0.72
TARDBP-219ENST00000617757 DOT1LQ8TEK3 1739 aa10.53□□□□□ -0.72
TARDBP-219ENST00000617757 KDM6AO15550 1401 aaPredicted RBP10.53□□□□□ -0.72
TARDBP-219ENST00000617757 TNS2Q63HR2 1409 aa10.53□□□□□ -0.72
TARDBP-219ENST00000617757 E9PSI1 815 aa10.53□□□□□ -0.72
TARDBP-219ENST00000617757 EXOC5O00471 708 aa10.53□□□□□ -0.72
TARDBP-219ENST00000617757 CALD1Q05682 793 aaKnown RBP10.53□□□□□ -0.72
TARDBP-219ENST00000617757 MPRIPQ6WCQ1 1025 aa10.53□□□□□ -0.72
TARDBP-219ENST00000617757 GJD4Q96KN9 370 aaPredicted RBP10.53□□□□□ -0.72
TARDBP-219ENST00000617757 QTRT2Q9H974 415 aaKnown RBP10.53□□□□□ -0.72
TARDBP-219ENST00000617757 LGR6Q9HBX8 967 aa10.53□□□□□ -0.72
TARDBP-219ENST00000617757 RNMTO43148 476 aaKnown RBP10.52□□□□□ -0.73
TARDBP-219ENST00000617757 ZNF853P0CG23 659 aa10.52□□□□□ -0.73
TARDBP-219ENST00000617757 GNAI1P63096 354 aa10.52□□□□□ -0.73
TARDBP-219ENST00000617757 DDB1Q16531 1140 aa10.52□□□□□ -0.73
TARDBP-219ENST00000617757 FAM98CQ17RN3 349 aaKnown RBP10.52□□□□□ -0.73
TARDBP-219ENST00000617757 DUSP27Q5VZP5 1158 aa10.52□□□□□ -0.73
TARDBP-219ENST00000617757 MRC1P22897 1456 aa10.51□□□□□ -0.73
TARDBP-219ENST00000617757 HSP90AB1P08238 724 aaKnown RBP10.51□□□□□ -0.73
TARDBP-219ENST00000617757 NKX1-1Q15270 411 aaPredicted RBP10.51□□□□□ -0.73
TARDBP-219ENST00000617757 ZNF772Q68DY9 489 aaPredicted RBP10.51□□□□□ -0.73
TARDBP-219ENST00000617757 DDX54Q8TDD1 881 aaKnown RBP10.51□□□□□ -0.73
TARDBP-219ENST00000617757 DCAF5Q96JK2 942 aa10.51□□□□□ -0.73
TARDBP-219ENST00000617757 CFAP44Q96MT7 982 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms