RNA–Protein interactions for RNA: ENST00000616701.4

SEMA3B-212, Transcript of semaphorin 3B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,958 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-212ENST00000616701 HSPA2P54652 639 aa19.79■□□□□ 0.76
SEMA3B-212ENST00000616701 DDX19BQ9UMR2 479 aa19.78■□□□□ 0.76
SEMA3B-212ENST00000616701 MARF1Q9Y4F3 1742 aaKnown RBP19.78■□□□□ 0.76
SEMA3B-212ENST00000616701 IGSF1Q8N6C5 1336 aa19.78■□□□□ 0.76
SEMA3B-212ENST00000616701 RWDD1Q9H446 243 aaPredicted RBP19.77■□□□□ 0.76
SEMA3B-212ENST00000616701 PDZRN3Q9UPQ7 1066 aa19.77■□□□□ 0.76
SEMA3B-212ENST00000616701 C8orf34Q49A92 452 aa19.77■□□□□ 0.75
SEMA3B-212ENST00000616701 RTF1Q92541 710 aaKnown RBP19.77■□□□□ 0.75
SEMA3B-212ENST00000616701 FAM161AQ3B820 660 aa19.76■□□□□ 0.75
SEMA3B-212ENST00000616701 C1orf115Q9H7X2 142 aa19.76■□□□□ 0.75
SEMA3B-212ENST00000616701 IPO9Q96P70 1041 aaKnown RBP19.75■□□□□ 0.75
SEMA3B-212ENST00000616701 CHL1O00533 1208 aa19.74■□□□□ 0.75
SEMA3B-212ENST00000616701 PDE4CQ08493 712 aa19.74■□□□□ 0.75
SEMA3B-212ENST00000616701 DDX17Q92841 729 aaKnown RBP19.74■□□□□ 0.75
SEMA3B-212ENST00000616701 AAMPQ13685 434 aa19.74■□□□□ 0.75
SEMA3B-212ENST00000616701 ZNF428Q96B54 188 aa19.73■□□□□ 0.75
SEMA3B-212ENST00000616701 ZBTB40Q9NUA8 1239 aa19.73■□□□□ 0.75
SEMA3B-212ENST00000616701 BRPF3Q9ULD4 1205 aa19.73■□□□□ 0.75
SEMA3B-212ENST00000616701 KDRP35968 1356 aa19.73■□□□□ 0.75
SEMA3B-212ENST00000616701 TSPYL4Q9UJ04 414 aa19.72■□□□□ 0.75
SEMA3B-212ENST00000616701 LRRC59Q96AG4 307 aaKnown RBP19.72■□□□□ 0.75
SEMA3B-212ENST00000616701 CRB1P82279 1406 aa19.71■□□□□ 0.75
SEMA3B-212ENST00000616701 GAS2L2Q8NHY3 880 aa19.71■□□□□ 0.75
SEMA3B-212ENST00000616701 NBPF6Q5VWK0 638 aa19.7■□□□□ 0.74
SEMA3B-212ENST00000616701 NBPF4Q96M43 638 aa19.7■□□□□ 0.74
SEMA3B-212ENST00000616701 BRPF1P55201 1214 aaPredicted RBP19.7■□□□□ 0.74
SEMA3B-212ENST00000616701 KRT28Q7Z3Y7 464 aa19.7■□□□□ 0.74
SEMA3B-212ENST00000616701 IP6K1Q92551 441 aa19.7■□□□□ 0.74
SEMA3B-212ENST00000616701 ZBTB47Q9UFB7 747 aaPredicted RBP19.69■□□□□ 0.74
SEMA3B-212ENST00000616701 LTN1O94822 1766 aa19.69■□□□□ 0.74
SEMA3B-212ENST00000616701 GCP02774 474 aa19.68■□□□□ 0.74
SEMA3B-212ENST00000616701 NECTIN2Q92692 538 aa19.68■□□□□ 0.74
SEMA3B-212ENST00000616701 C19orf44Q9H6X5 657 aa19.68■□□□□ 0.74
SEMA3B-212ENST00000616701 NWD1Q149M9 1564 aa19.67■□□□□ 0.74
SEMA3B-212ENST00000616701 ZBTB7BO15156 539 aaPredicted RBP19.67■□□□□ 0.74
SEMA3B-212ENST00000616701 GNAT3A8MTJ3 354 aa19.67■□□□□ 0.74
SEMA3B-212ENST00000616701 TMEM94Q12767 1356 aa19.66■□□□□ 0.74
SEMA3B-212ENST00000616701 ARHGAP45Q92619 1136 aa19.66■□□□□ 0.74
SEMA3B-212ENST00000616701 IL17REQ8NFR9 667 aa19.66■□□□□ 0.74
SEMA3B-212ENST00000616701 ATF3P18847 181 aa19.65■□□□□ 0.74
SEMA3B-212ENST00000616701 KCNH5Q8NCM2 988 aa19.65■□□□□ 0.74
SEMA3B-212ENST00000616701 NFAT5O94916 1531 aa19.65■□□□□ 0.74
SEMA3B-212ENST00000616701 ABCC4O15439 1325 aa19.65■□□□□ 0.74
SEMA3B-212ENST00000616701 SEC24BO95487 1268 aa19.65■□□□□ 0.74
SEMA3B-212ENST00000616701 HDAC1Q13547 482 aaPredicted RBP19.65■□□□□ 0.74
SEMA3B-212ENST00000616701 ZC3H6P61129 1189 aaKnown RBP19.65■□□□□ 0.74
SEMA3B-212ENST00000616701 C1orf167Q5SNV9 1468 aa19.65■□□□□ 0.74
SEMA3B-212ENST00000616701 KIF24Q5T7B8 1368 aa19.64■□□□□ 0.74
SEMA3B-212ENST00000616701 SLC4A2P04920 1241 aa19.64■□□□□ 0.73
SEMA3B-212ENST00000616701 RBM10P98175 930 aaKnown RBP19.64■□□□□ 0.73
SEMA3B-212ENST00000616701 API5Q9BZZ5 524 aaKnown RBP19.64■□□□□ 0.73
SEMA3B-212ENST00000616701 G2E3Q7L622 706 aa19.63■□□□□ 0.73
SEMA3B-212ENST00000616701 USP54Q70EL1 1684 aa19.63■□□□□ 0.73
SEMA3B-212ENST00000616701 RTL1A6NKG5 1358 aa19.62■□□□□ 0.73
SEMA3B-212ENST00000616701 MSH6P52701 1360 aa19.62■□□□□ 0.73
SEMA3B-212ENST00000616701 SLC4A3P48751 1232 aa19.62■□□□□ 0.73
SEMA3B-212ENST00000616701 AXIN2Q9Y2T1 843 aa19.62■□□□□ 0.73
SEMA3B-212ENST00000616701 MAP3K5Q99683 1374 aa19.62■□□□□ 0.73
SEMA3B-212ENST00000616701 ARHGEF25Q86VW2 580 aa19.62■□□□□ 0.73
SEMA3B-212ENST00000616701 LNPKQ9C0E8 428 aa19.61■□□□□ 0.73
SEMA3B-212ENST00000616701 KIAA0232Q92628 1395 aa19.61■□□□□ 0.73
SEMA3B-212ENST00000616701 BCL11BQ9C0K0 894 aaPredicted RBP19.61■□□□□ 0.73
SEMA3B-212ENST00000616701 RGPD2P0DJD1 1756 aa19.61■□□□□ 0.73
SEMA3B-212ENST00000616701 CABLES1Q8TDN4 633 aa19.6■□□□□ 0.73
SEMA3B-212ENST00000616701 LGR6Q9HBX8 967 aa19.6■□□□□ 0.73
SEMA3B-212ENST00000616701 F6X3S4 739 aa19.6■□□□□ 0.73
SEMA3B-212ENST00000616701 STRCP1A6NGW2 1772 aa19.59■□□□□ 0.73
SEMA3B-212ENST00000616701 FGD1P98174 961 aa19.59■□□□□ 0.73
SEMA3B-212ENST00000616701 SMC5Q8IY18 1101 aa19.59■□□□□ 0.73
SEMA3B-212ENST00000616701 ANKRD24Q8TF21 1146 aa19.59■□□□□ 0.73
SEMA3B-212ENST00000616701 SLC4A10Q6U841 1118 aa19.59■□□□□ 0.73
SEMA3B-212ENST00000616701 SIRT2Q8IXJ6 389 aa19.59■□□□□ 0.73
SEMA3B-212ENST00000616701 PDIA4P13667 645 aaKnown RBP19.57■□□□□ 0.72
SEMA3B-212ENST00000616701 MPRIPQ6WCQ1 1025 aa19.57■□□□□ 0.72
SEMA3B-212ENST00000616701 HTATSF1O43719 755 aaKnown RBP19.56■□□□□ 0.72
SEMA3B-212ENST00000616701 HAP1P54257 671 aaPredicted RBP19.56■□□□□ 0.72
SEMA3B-212ENST00000616701 TAF7Q15545 349 aaPredicted RBP19.56■□□□□ 0.72
SEMA3B-212ENST00000616701 ANKRD45Q5TZF3 282 aa19.56■□□□□ 0.72
SEMA3B-212ENST00000616701 ZNF530Q6P9A1 599 aaPredicted RBP19.56■□□□□ 0.72
SEMA3B-212ENST00000616701 RGS12O14924 1447 aa19.56■□□□□ 0.72
SEMA3B-212ENST00000616701 MST1RQ04912 1400 aa19.56■□□□□ 0.72
SEMA3B-212ENST00000616701 KCNQ3O43525 872 aa19.54■□□□□ 0.72
SEMA3B-212ENST00000616701 MEIS3Q99687 375 aa19.54■□□□□ 0.72
SEMA3B-212ENST00000616701 USP19O94966 1318 aa19.54■□□□□ 0.72
SEMA3B-212ENST00000616701 NUCB1Q02818 461 aa19.53■□□□□ 0.72
SEMA3B-212ENST00000616701 INTS3Q68E01 1043 aaKnown RBP19.53■□□□□ 0.72
SEMA3B-212ENST00000616701 STK31Q9BXU1 1019 aa19.53■□□□□ 0.72
SEMA3B-212ENST00000616701 TRPM3Q9HCF6 1732 aaPredicted RBP19.53■□□□□ 0.72
SEMA3B-212ENST00000616701 CHD1LQ86WJ1 897 aa19.53■□□□□ 0.72
SEMA3B-212ENST00000616701 CHMP4BQ9H444 224 aaKnown RBP19.53■□□□□ 0.72
SEMA3B-212ENST00000616701 CHRNA2Q15822 529 aa19.53■□□□□ 0.72
SEMA3B-212ENST00000616701 KDM4FA0A1W2PPD8 638 aa19.52■□□□□ 0.72
SEMA3B-212ENST00000616701 EIF2S2P20042 333 aaKnown RBP19.52■□□□□ 0.72
SEMA3B-212ENST00000616701 SLIT3O75094 1523 aa19.52■□□□□ 0.71
SEMA3B-212ENST00000616701 PTPRCP08575 1304 aa19.51■□□□□ 0.71
SEMA3B-212ENST00000616701 APBB1O00213 710 aa19.51■□□□□ 0.71
SEMA3B-212ENST00000616701 PLEKHO1Q53GL0 409 aaPredicted RBP19.51■□□□□ 0.71
SEMA3B-212ENST00000616701 CADPS2Q86UW7 1296 aa19.51■□□□□ 0.71
SEMA3B-212ENST00000616701 FKBP5Q13451 457 aaPredicted RBP19.5■□□□□ 0.71
SEMA3B-212ENST00000616701 DDRGK1Q96HY6 314 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms