RNA–Protein interactions for RNA: ENST00000616010.4

CCND3-223, Transcript of cyclin D3, humanhuman

TSL 5 BASIC

Gene CCND3, Length 2,047 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-223ENST00000616010 PLEKHO1Q53GL0 409 aaPredicted RBP30.59■■■□□ 2.49
CCND3-223ENST00000616010 CARD10Q9BWT7 1032 aa30.59■■■□□ 2.49
CCND3-223ENST00000616010 LRP6O75581 1613 aa30.59■■■□□ 2.49
CCND3-223ENST00000616010 NWD2Q9ULI1 1742 aa30.59■■■□□ 2.49
CCND3-223ENST00000616010 AMOTQ4VCS5 1084 aa30.59■■■□□ 2.49
CCND3-223ENST00000616010 MAP3K5Q99683 1374 aa30.59■■■□□ 2.49
CCND3-223ENST00000616010 PARP4Q9UKK3 1724 aaKnown RBP30.58■■■□□ 2.49
CCND3-223ENST00000616010 IL16Q14005 1332 aa30.58■■■□□ 2.49
CCND3-223ENST00000616010 TATP17735 454 aaPredicted RBP30.58■■■□□ 2.49
CCND3-223ENST00000616010 MCM10Q7L590 875 aa30.57■■■□□ 2.49
CCND3-223ENST00000616010 CALD1Q05682 793 aaKnown RBP30.57■■■□□ 2.48
CCND3-223ENST00000616010 RTF1Q92541 710 aaKnown RBP30.57■■■□□ 2.48
CCND3-223ENST00000616010 GNAT3A8MTJ3 354 aa30.56■■■□□ 2.48
CCND3-223ENST00000616010 MYH16Q9H6N6 1097 aa30.56■■■□□ 2.48
CCND3-223ENST00000616010 PKD1L3Q7Z443 1732 aa30.56■■■□□ 2.48
CCND3-223ENST00000616010 ZNF530Q6P9A1 599 aaPredicted RBP30.56■■■□□ 2.48
CCND3-223ENST00000616010 SLIT2O94813 1529 aa30.55■■■□□ 2.48
CCND3-223ENST00000616010 PLEKHG2Q9H7P9 1386 aa30.55■■■□□ 2.48
CCND3-223ENST00000616010 USP35Q9P2H5 1018 aa30.54■■■□□ 2.48
CCND3-223ENST00000616010 LRRC37A3O60309 1634 aa30.54■■■□□ 2.48
CCND3-223ENST00000616010 OVOS2A0A0G2JMS6 1433 aa30.53■■■□□ 2.48
CCND3-223ENST00000616010 C8orf37Q96NL8 207 aa30.52■■■□□ 2.48
CCND3-223ENST00000616010 FANCIQ9NVI1 1328 aa30.52■■■□□ 2.48
CCND3-223ENST00000616010 HTATSF1O43719 755 aaKnown RBP30.52■■■□□ 2.48
CCND3-223ENST00000616010 TSR2Q969E8 191 aaKnown RBP30.52■■■□□ 2.48
CCND3-223ENST00000616010 LAS1LQ9Y4W2 734 aaKnown RBP30.51■■■□□ 2.47
CCND3-223ENST00000616010 AKAP4Q5JQC9 854 aa30.5■■■□□ 2.47
CCND3-223ENST00000616010 C1orf141Q5JVX7 400 aa30.5■■■□□ 2.47
CCND3-223ENST00000616010 IL2RBP14784 551 aa30.49■■■□□ 2.47
CCND3-223ENST00000616010 IFT57Q9NWB7 429 aa30.49■■■□□ 2.47
CCND3-223ENST00000616010 SPG7Q9UQ90 795 aa30.49■■■□□ 2.47
CCND3-223ENST00000616010 SUPT16HQ9Y5B9 1047 aaKnown RBP30.49■■■□□ 2.47
CCND3-223ENST00000616010 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.49■■■□□ 2.47
CCND3-223ENST00000616010 NGLY1Q96IV0 654 aa30.48■■■□□ 2.47
CCND3-223ENST00000616010 VIRMAQ69YN4 1812 aaKnown RBP30.48■■■□□ 2.47
CCND3-223ENST00000616010 GNAI1P63096 354 aa30.47■■■□□ 2.47
CCND3-223ENST00000616010 RCAN3Q9UKA8 241 aa30.47■■■□□ 2.47
CCND3-223ENST00000616010 WNK3Q9BYP7 1800 aa30.47■■■□□ 2.47
CCND3-223ENST00000616010 CFAP44Q96MT7 982 aa30.46■■■□□ 2.47
CCND3-223ENST00000616010 IL17REQ8NFR9 667 aa30.46■■■□□ 2.47
CCND3-223ENST00000616010 ZNF853P0CG23 659 aa30.45■■■□□ 2.46
CCND3-223ENST00000616010 MEX3CQ5U5Q3 659 aaKnown RBP30.44■■■□□ 2.46
CCND3-223ENST00000616010 SHANK3Q9BYB0 1731 aa30.43■■■□□ 2.46
CCND3-223ENST00000616010 MBIPQ9NS73 344 aa30.43■■■□□ 2.46
CCND3-223ENST00000616010 CEMIPQ8WUJ3 1361 aa30.43■■■□□ 2.46
CCND3-223ENST00000616010 BCL9LQ86UU0 1499 aa30.42■■■□□ 2.46
CCND3-223ENST00000616010 MPRIPQ6WCQ1 1025 aa30.42■■■□□ 2.46
CCND3-223ENST00000616010 UNC5CLQ8IV45 518 aa30.42■■■□□ 2.46
CCND3-223ENST00000616010 DISP2A7MBM2 1401 aa30.42■■■□□ 2.46
CCND3-223ENST00000616010 SPATA31A1Q5TZJ5 1347 aa30.41■■■□□ 2.46
CCND3-223ENST00000616010 PHKG2P15735 406 aa30.41■■■□□ 2.46
CCND3-223ENST00000616010 ADAMTS7Q9UKP4 1686 aa30.41■■■□□ 2.46
CCND3-223ENST00000616010 ZCRB1Q8TBF4 217 aaKnown RBP30.4■■■□□ 2.46
CCND3-223ENST00000616010 LGR6Q9HBX8 967 aa30.4■■■□□ 2.46
CCND3-223ENST00000616010 EXOSC9Q06265 439 aaKnown RBP30.4■■■□□ 2.46
CCND3-223ENST00000616010 IFNL2Q8IZJ0 200 aa30.4■■■□□ 2.46
CCND3-223ENST00000616010 FNBP4Q8N3X1 1017 aaPredicted RBP30.4■■■□□ 2.46
CCND3-223ENST00000616010 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.4■■■□□ 2.46
CCND3-223ENST00000616010 PCDH11XQ9BZA7 1347 aa30.4■■■□□ 2.46
CCND3-223ENST00000616010 PCDH11YQ9BZA8 1340 aa30.4■■■□□ 2.46
CCND3-223ENST00000616010 CYP27B1O15528 508 aa30.39■■■□□ 2.46
CCND3-223ENST00000616010 CCDC9Q9Y3X0 531 aaKnown RBP30.39■■■□□ 2.45
CCND3-223ENST00000616010 SPATA31A5Q5VU36 1347 aa30.38■■■□□ 2.45
CCND3-223ENST00000616010 SPATA31A7Q8IWB4 1347 aa30.38■■■□□ 2.45
CCND3-223ENST00000616010 RNMTO43148 476 aaKnown RBP30.38■■■□□ 2.45
CCND3-223ENST00000616010 SCN11AQ9UI33 1791 aa30.38■■■□□ 2.45
CCND3-223ENST00000616010 CHL1O00533 1208 aa30.37■■■□□ 2.45
CCND3-223ENST00000616010 KDM6AO15550 1401 aaPredicted RBP30.37■■■□□ 2.45
CCND3-223ENST00000616010 USP21Q9UK80 565 aa30.35■■■□□ 2.45
CCND3-223ENST00000616010 MIS18AQ9NYP9 233 aa30.35■■■□□ 2.45
CCND3-223ENST00000616010 THRAP3Q9Y2W1 955 aaKnown RBP30.35■■■□□ 2.45
CCND3-223ENST00000616010 TSPYL4Q9UJ04 414 aa30.34■■■□□ 2.45
CCND3-223ENST00000616010 GTF3C3Q9Y5Q9 886 aa30.34■■■□□ 2.45
CCND3-223ENST00000616010 TEFQ10587 303 aa30.34■■■□□ 2.45
CCND3-223ENST00000616010 VPS72Q15906 364 aa30.33■■■□□ 2.45
CCND3-223ENST00000616010 SIPA1L3O60292 1781 aaPredicted RBP30.32■■■□□ 2.45
CCND3-223ENST00000616010 TAF7Q15545 349 aaPredicted RBP30.32■■■□□ 2.44
CCND3-223ENST00000616010 RNF123Q5XPI4 1314 aa30.31■■■□□ 2.44
CCND3-223ENST00000616010 HSP90AB1P08238 724 aaKnown RBP30.31■■■□□ 2.44
CCND3-223ENST00000616010 DDX54Q8TDD1 881 aaKnown RBP30.31■■■□□ 2.44
CCND3-223ENST00000616010 AFF2P51816 1311 aa30.31■■■□□ 2.44
CCND3-223ENST00000616010 NEFLP07196 543 aa30.3■■■□□ 2.44
CCND3-223ENST00000616010 CT47B1P0C2W7 299 aaPredicted RBP30.3■■■□□ 2.44
CCND3-223ENST00000616010 DCAF5Q96JK2 942 aa30.3■■■□□ 2.44
CCND3-223ENST00000616010 TNS2Q63HR2 1409 aa30.3■■■□□ 2.44
CCND3-223ENST00000616010 CDCA7Q9BWT1 371 aaPredicted RBP30.29■■■□□ 2.44
CCND3-223ENST00000616010 KDM3BQ7LBC6 1761 aa30.29■■■□□ 2.44
CCND3-223ENST00000616010 RRP1P56182 461 aaKnown RBP30.29■■■□□ 2.44
CCND3-223ENST00000616010 MRC1P22897 1456 aa30.28■■■□□ 2.44
CCND3-223ENST00000616010 BARGINQ6ZT62 677 aa30.27■■■□□ 2.44
CCND3-223ENST00000616010 BABAM1Q9NWV8 329 aa30.27■■■□□ 2.44
CCND3-223ENST00000616010 TSPYL6Q8N831 410 aa30.27■■■□□ 2.44
CCND3-223ENST00000616010 RARSP54136 660 aaKnown RBP30.26■■■□□ 2.43
CCND3-223ENST00000616010 C8orf58Q8NAV2 365 aa30.26■■■□□ 2.43
CCND3-223ENST00000616010 ELL2O00472 640 aaPredicted RBP30.25■■■□□ 2.43
CCND3-223ENST00000616010 IRX6P78412 446 aaPredicted RBP30.25■■■□□ 2.43
CCND3-223ENST00000616010 BCAR3O75815 825 aa30.25■■■□□ 2.43
CCND3-223ENST00000616010 KRT24Q2M2I5 525 aa30.25■■■□□ 2.43
CCND3-223ENST00000616010 FBXO41Q8TF61 875 aa30.25■■■□□ 2.43
CCND3-223ENST00000616010 BTBD11A6QL63 1104 aa30.24■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms