RNA–Protein interactions for RNA: ENST00000615665.4

SSBP2-220, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene SSBP2, Length 4,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-220ENST00000615665 PHF8Q9UPP1 1060 aa17.09■□□□□ 0.33
SSBP2-220ENST00000615665 TAF7Q15545 349 aaPredicted RBP17.09■□□□□ 0.33
SSBP2-220ENST00000615665 IQGAP1P46940 1657 aa17.09■□□□□ 0.33
SSBP2-220ENST00000615665 FOXD4L6Q3SYB3 417 aaPredicted RBP17.09■□□□□ 0.33
SSBP2-220ENST00000615665 FOXD4L3Q6VB84 417 aaPredicted RBP17.09■□□□□ 0.33
SSBP2-220ENST00000615665 TBC1D9Q6ZT07 1266 aa17.09■□□□□ 0.33
SSBP2-220ENST00000615665 SETBP1Q9Y6X0 1596 aa17.09■□□□□ 0.33
SSBP2-220ENST00000615665 ZRSR1Q15695 479 aaKnown RBP17.08■□□□□ 0.32
SSBP2-220ENST00000615665 USHBP1Q8N6Y0 703 aa17.08■□□□□ 0.32
SSBP2-220ENST00000615665 RIC3Q7Z5B4 369 aa17.08■□□□□ 0.32
SSBP2-220ENST00000615665 CLASRPQ8N2M8 674 aaKnown RBP17.08■□□□□ 0.32
SSBP2-220ENST00000615665 GLI2P10070 1586 aa17.07■□□□□ 0.32
SSBP2-220ENST00000615665 MRE11P49959 708 aa17.07■□□□□ 0.32
SSBP2-220ENST00000615665 VSIG10Q8N0Z9 540 aa17.07■□□□□ 0.32
SSBP2-220ENST00000615665 KCNH5Q8NCM2 988 aa17.07■□□□□ 0.32
SSBP2-220ENST00000615665 CNTROBQ8N137 903 aa17.07■□□□□ 0.32
SSBP2-220ENST00000615665 ZKSCAN1P17029 563 aaPredicted RBP17.06■□□□□ 0.32
SSBP2-220ENST00000615665 GORABQ5T7V8 394 aa17.06■□□□□ 0.32
SSBP2-220ENST00000615665 XPCQ01831 940 aaPredicted RBP17.06■□□□□ 0.32
SSBP2-220ENST00000615665 FLIIQ13045 1269 aa17.06■□□□□ 0.32
SSBP2-220ENST00000615665 CSPP1Q1MSJ5 1256 aa17.06■□□□□ 0.32
SSBP2-220ENST00000615665 MCM2P49736 904 aa17.05■□□□□ 0.32
SSBP2-220ENST00000615665 QRICH2Q9H0J4 1663 aa17.05■□□□□ 0.32
SSBP2-220ENST00000615665 ZBTB7BO15156 539 aaPredicted RBP17.05■□□□□ 0.32
SSBP2-220ENST00000615665 BTBD11A6QL63 1104 aa17.05■□□□□ 0.32
SSBP2-220ENST00000615665 PHF14O94880 888 aa17.05■□□□□ 0.32
SSBP2-220ENST00000615665 KRT24Q2M2I5 525 aa17.05■□□□□ 0.32
SSBP2-220ENST00000615665 SRGAP3O43295 1099 aa17.04■□□□□ 0.32
SSBP2-220ENST00000615665 MEIS3Q99687 375 aa17.04■□□□□ 0.32
SSBP2-220ENST00000615665 IL1RAPL2Q9NP60 686 aa17.04■□□□□ 0.32
SSBP2-220ENST00000615665 FLT4P35916 1363 aa17.04■□□□□ 0.32
SSBP2-220ENST00000615665 KIAA1210Q9ULL0 1709 aa17.04■□□□□ 0.32
SSBP2-220ENST00000615665 ANKRD44Q8N8A2 993 aa17.04■□□□□ 0.32
SSBP2-220ENST00000615665 RBM33Q96EV2 1170 aaKnown RBP17.04■□□□□ 0.32
SSBP2-220ENST00000615665 HSP90B1P14625 803 aaKnown RBP17.04■□□□□ 0.32
SSBP2-220ENST00000615665 TAF7LQ5H9L4 462 aa17.04■□□□□ 0.32
SSBP2-220ENST00000615665 TAOK2Q9UL54 1235 aa17.04■□□□□ 0.32
SSBP2-220ENST00000615665 ATP6V1DQ9Y5K8 247 aa17.04■□□□□ 0.32
SSBP2-220ENST00000615665 KIDINS220Q9ULH0 1771 aa17.03■□□□□ 0.32
SSBP2-220ENST00000615665 CWC22Q9HCG8 908 aaKnown RBP17.03■□□□□ 0.32
SSBP2-220ENST00000615665 MTHFSDQ2M296 383 aaKnown RBP17.03■□□□□ 0.32
SSBP2-220ENST00000615665 TTC22Q5TAA0 569 aa17.03■□□□□ 0.32
SSBP2-220ENST00000615665 CCDC9Q9Y3X0 531 aaKnown RBP17.03■□□□□ 0.32
SSBP2-220ENST00000615665 MX1P20591 662 aa17.02■□□□□ 0.32
SSBP2-220ENST00000615665 SIRT1Q96EB6 747 aa17.02■□□□□ 0.32
SSBP2-220ENST00000615665 MAP3K19Q56UN5 1328 aa17.02■□□□□ 0.32
SSBP2-220ENST00000615665 TMEM2Q9UHN6 1383 aa17.02■□□□□ 0.32
SSBP2-220ENST00000615665 ATP7BP35670 1465 aa17.02■□□□□ 0.31
SSBP2-220ENST00000615665 METP08581 1390 aa17.01■□□□□ 0.31
SSBP2-220ENST00000615665 FOXO3O43524 673 aa17■□□□□ 0.31
SSBP2-220ENST00000615665 ERC1Q8IUD2 1116 aa17■□□□□ 0.31
SSBP2-220ENST00000615665 TBX22Q9Y458 520 aa17■□□□□ 0.31
SSBP2-220ENST00000615665 LRRFIP2Q9Y608 721 aaKnown RBP17■□□□□ 0.31
SSBP2-220ENST00000615665 TATP17735 454 aaPredicted RBP17■□□□□ 0.31
SSBP2-220ENST00000615665 HTATSF1O43719 755 aaKnown RBP17■□□□□ 0.31
SSBP2-220ENST00000615665 SMC3Q9UQE7 1217 aa17■□□□□ 0.31
SSBP2-220ENST00000615665 RNF20Q5VTR2 975 aa16.99■□□□□ 0.31
SSBP2-220ENST00000615665 DCTPP1Q9H773 170 aa16.99■□□□□ 0.31
SSBP2-220ENST00000615665 PHF23Q9BUL5 403 aaPredicted RBP16.99■□□□□ 0.31
SSBP2-220ENST00000615665 MAP4K4O95819 1239 aaPredicted RBP16.99■□□□□ 0.31
SSBP2-220ENST00000615665 EYA1Q99502 592 aa16.99■□□□□ 0.31
SSBP2-220ENST00000615665 CAMSAP1Q5T5Y3 1602 aa16.99■□□□□ 0.31
SSBP2-220ENST00000615665 DEPDC5O75140 1603 aa16.98■□□□□ 0.31
SSBP2-220ENST00000615665 FAM135BQ49AJ0 1406 aa16.98■□□□□ 0.31
SSBP2-220ENST00000615665 NUTM1Q86Y26 1132 aa16.98■□□□□ 0.31
SSBP2-220ENST00000615665 VWDEQ8N2E2 1590 aa16.98■□□□□ 0.31
SSBP2-220ENST00000615665 CAVIN1Q6NZI2 390 aaKnown RBP16.98■□□□□ 0.31
SSBP2-220ENST00000615665 AMOTQ4VCS5 1084 aa16.97■□□□□ 0.31
SSBP2-220ENST00000615665 PLEKHG3A1L390 1219 aa16.97■□□□□ 0.31
SSBP2-220ENST00000615665 EVA1CP58658 441 aa16.97■□□□□ 0.31
SSBP2-220ENST00000615665 ISY1Q9ULR0 285 aaKnown RBP16.97■□□□□ 0.31
SSBP2-220ENST00000615665 TULP4Q9NRJ4 1543 aa16.97■□□□□ 0.31
SSBP2-220ENST00000615665 CHL1O00533 1208 aa16.97■□□□□ 0.31
SSBP2-220ENST00000615665 PRPF40AO75400 957 aaKnown RBP16.97■□□□□ 0.31
SSBP2-220ENST00000615665 ZC3H6P61129 1189 aaKnown RBP16.97■□□□□ 0.31
SSBP2-220ENST00000615665 CEP85Q6P2H3 762 aa16.97■□□□□ 0.31
SSBP2-220ENST00000615665 MPRIPQ6WCQ1 1025 aa16.97■□□□□ 0.31
SSBP2-220ENST00000615665 NRXN1Q9ULB1 1477 aa16.97■□□□□ 0.31
SSBP2-220ENST00000615665 TNPO1Q92973 898 aaKnown RBP16.96■□□□□ 0.31
SSBP2-220ENST00000615665 KIF1BPQ96EK5 621 aa16.96■□□□□ 0.31
SSBP2-220ENST00000615665 AATKQ6ZMQ8 1374 aa16.96■□□□□ 0.31
SSBP2-220ENST00000615665 PIK3R4Q99570 1358 aa16.96■□□□□ 0.31
SSBP2-220ENST00000615665 RAB11FIP3O75154 756 aa16.96■□□□□ 0.31
SSBP2-220ENST00000615665 TSPOAP1O95153 1857 aa16.96■□□□□ 0.31
SSBP2-220ENST00000615665 SDSP20132 328 aa16.96■□□□□ 0.31
SSBP2-220ENST00000615665 HSP90AA2PQ14568 343 aaPredicted RBP16.96■□□□□ 0.31
SSBP2-220ENST00000615665 C16orf71Q8IYS4 520 aaPredicted RBP16.96■□□□□ 0.31
SSBP2-220ENST00000615665 FSD1Q9BTV5 496 aa16.96■□□□□ 0.31
SSBP2-220ENST00000615665 DNAAF4Q8WXU2 420 aa16.96■□□□□ 0.3
SSBP2-220ENST00000615665 NASPP49321 788 aaPredicted RBP16.95■□□□□ 0.3
SSBP2-220ENST00000615665 KIAA2012Q0VF49 1180 aa16.95■□□□□ 0.3
SSBP2-220ENST00000615665 SNX21Q969T3 373 aa16.95■□□□□ 0.3
SSBP2-220ENST00000615665 SPG7Q9UQ90 795 aa16.95■□□□□ 0.3
SSBP2-220ENST00000615665 KCNA6P17658 529 aa16.95■□□□□ 0.3
SSBP2-220ENST00000615665 LTKP29376 864 aa16.95■□□□□ 0.3
SSBP2-220ENST00000615665 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.94■□□□□ 0.3
SSBP2-220ENST00000615665 DIP2CQ9Y2E4 1556 aa16.94■□□□□ 0.3
SSBP2-220ENST00000615665 SBNO1A3KN83 1393 aa16.94■□□□□ 0.3
SSBP2-220ENST00000615665 GRPEL1Q9HAV7 217 aa16.94■□□□□ 0.3
SSBP2-220ENST00000615665 VPS37CA5D8V6 355 aaPredicted RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms