RNA–Protein interactions for RNA: ENST00000615468.4

TNFAIP3-208, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-208ENST00000615468 CCDC112Q8NEF3 446 aa12.5□□□□□ -0.41
TNFAIP3-208ENST00000615468 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.5□□□□□ -0.41
TNFAIP3-208ENST00000615468 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.5□□□□□ -0.41
TNFAIP3-208ENST00000615468 V9GYY5 206 aaPredicted RBP12.5□□□□□ -0.41
TNFAIP3-208ENST00000615468 WAPLQ7Z5K2 1190 aa12.49□□□□□ -0.41
TNFAIP3-208ENST00000615468 KRT222Q8N1A0 295 aa12.49□□□□□ -0.41
TNFAIP3-208ENST00000615468 CARD14Q9BXL6 1004 aa12.49□□□□□ -0.41
TNFAIP3-208ENST00000615468 UVSSAQ2YD98 709 aa12.49□□□□□ -0.41
TNFAIP3-208ENST00000615468 SMARCA5O60264 1052 aaPredicted RBP12.49□□□□□ -0.41
TNFAIP3-208ENST00000615468 NCBP1Q09161 790 aaKnown RBP12.49□□□□□ -0.41
TNFAIP3-208ENST00000615468 ANKRD7Q92527 254 aa12.49□□□□□ -0.41
TNFAIP3-208ENST00000615468 SCAF11Q99590 1463 aaKnown RBP12.48□□□□□ -0.41
TNFAIP3-208ENST00000615468 SLFN14P0C7P3 912 aa12.48□□□□□ -0.41
TNFAIP3-208ENST00000615468 USP26Q9BXU7 913 aa12.48□□□□□ -0.41
TNFAIP3-208ENST00000615468 GGNBP2Q9H3C7 697 aa12.48□□□□□ -0.41
TNFAIP3-208ENST00000615468 CHMP3Q9Y3E7 222 aa12.48□□□□□ -0.41
TNFAIP3-208ENST00000615468 CLTCL1P53675 1640 aa12.48□□□□□ -0.41
TNFAIP3-208ENST00000615468 TNNT1P13805 278 aa12.48□□□□□ -0.41
TNFAIP3-208ENST00000615468 USP48Q86UV5 1035 aa12.48□□□□□ -0.41
TNFAIP3-208ENST00000615468 KIAA1524Q8TCG1 905 aa12.48□□□□□ -0.41
TNFAIP3-208ENST00000615468 TERF2Q15554 542 aa12.47□□□□□ -0.41
TNFAIP3-208ENST00000615468 RTF1Q92541 710 aaKnown RBP12.47□□□□□ -0.41
TNFAIP3-208ENST00000615468 CFAP44Q96MT7 982 aa12.47□□□□□ -0.41
TNFAIP3-208ENST00000615468 SPTLC3Q9NUV7 552 aa12.47□□□□□ -0.41
TNFAIP3-208ENST00000615468 CTNNA3Q9UI47 895 aa12.47□□□□□ -0.41
TNFAIP3-208ENST00000615468 REC8O95072 547 aa12.47□□□□□ -0.41
TNFAIP3-208ENST00000615468 TPD52L1Q16890 204 aaPredicted RBP12.47□□□□□ -0.41
TNFAIP3-208ENST00000615468 C14orf93Q9H972 538 aaKnown RBP12.47□□□□□ -0.41
TNFAIP3-208ENST00000615468 KDM4AO75164 1064 aa12.47□□□□□ -0.41
TNFAIP3-208ENST00000615468 TMX3Q96JJ7 454 aa12.47□□□□□ -0.41
TNFAIP3-208ENST00000615468 PTPRTO14522 1441 aa12.46□□□□□ -0.41
TNFAIP3-208ENST00000615468 FIBPO43427 364 aa12.46□□□□□ -0.41
TNFAIP3-208ENST00000615468 FBLN1P23142 703 aa12.46□□□□□ -0.41
TNFAIP3-208ENST00000615468 GIMAP6Q6P9H5 292 aa12.46□□□□□ -0.41
TNFAIP3-208ENST00000615468 C16orf71Q8IYS4 520 aaPredicted RBP12.46□□□□□ -0.41
TNFAIP3-208ENST00000615468 PTGS1P23219 599 aa12.46□□□□□ -0.42
TNFAIP3-208ENST00000615468 CCDC183Q5T5S1 534 aa12.46□□□□□ -0.42
TNFAIP3-208ENST00000615468 TXNDC2Q86VQ3 553 aa12.46□□□□□ -0.42
TNFAIP3-208ENST00000615468 CCDC27Q2M243 656 aa12.45□□□□□ -0.42
TNFAIP3-208ENST00000615468 DDX41Q9UJV9 622 aaKnown RBP12.45□□□□□ -0.42
TNFAIP3-208ENST00000615468 KIDINS220Q9ULH0 1771 aa12.45□□□□□ -0.42
TNFAIP3-208ENST00000615468 TPM3P06753 285 aa12.45□□□□□ -0.42
TNFAIP3-208ENST00000615468 CT47B1P0C2W7 299 aaPredicted RBP12.45□□□□□ -0.42
TNFAIP3-208ENST00000615468 SLC52A1Q9NWF4 448 aa12.45□□□□□ -0.42
TNFAIP3-208ENST00000615468 GSPT1P15170 499 aaKnown RBP12.45□□□□□ -0.42
TNFAIP3-208ENST00000615468 TRPM2O94759 1503 aa12.44□□□□□ -0.42
TNFAIP3-208ENST00000615468 ARAP3Q8WWN8 1544 aa12.44□□□□□ -0.42
TNFAIP3-208ENST00000615468 INO80Q9ULG1 1556 aaPredicted RBP12.44□□□□□ -0.42
TNFAIP3-208ENST00000615468 TRPM1Q7Z4N2 1603 aa12.44□□□□□ -0.42
TNFAIP3-208ENST00000615468 EVC2Q86UK5 1308 aa12.44□□□□□ -0.42
TNFAIP3-208ENST00000615468 SLC26A8Q96RN1 970 aa12.43□□□□□ -0.42
TNFAIP3-208ENST00000615468 POLR3AO14802 1390 aaPredicted RBP12.43□□□□□ -0.42
TNFAIP3-208ENST00000615468 MLH3Q9UHC1 1453 aa12.43□□□□□ -0.42
TNFAIP3-208ENST00000615468 CCDC186Q7Z3E2 898 aa12.43□□□□□ -0.42
TNFAIP3-208ENST00000615468 KIF18AQ8NI77 898 aa12.43□□□□□ -0.42
TNFAIP3-208ENST00000615468 TMX1Q9H3N1 280 aa12.43□□□□□ -0.42
TNFAIP3-208ENST00000615468 SMTNL1A8MU46 457 aa12.42□□□□□ -0.42
TNFAIP3-208ENST00000615468 CTIFO43310 598 aaKnown RBP12.42□□□□□ -0.42
TNFAIP3-208ENST00000615468 PLEKHM2Q8IWE5 1019 aa12.42□□□□□ -0.42
TNFAIP3-208ENST00000615468 UPF3BQ9BZI7 483 aaKnown RBP12.42□□□□□ -0.42
TNFAIP3-208ENST00000615468 ST7Q9NRC1 585 aa12.42□□□□□ -0.42
TNFAIP3-208ENST00000615468 BRD1O95696 1058 aa12.42□□□□□ -0.42
TNFAIP3-208ENST00000615468 LRMPQ12912 555 aa12.42□□□□□ -0.42
TNFAIP3-208ENST00000615468 NOL10Q9BSC4 688 aaKnown RBP12.42□□□□□ -0.42
TNFAIP3-208ENST00000615468 TRIM5Q9C035 493 aa12.42□□□□□ -0.42
TNFAIP3-208ENST00000615468 KCNF1Q9H3M0 494 aa12.42□□□□□ -0.42
TNFAIP3-208ENST00000615468 CNPY2Q9Y2B0 182 aa12.42□□□□□ -0.42
TNFAIP3-208ENST00000615468 NEO1Q92859 1461 aa12.42□□□□□ -0.42
TNFAIP3-208ENST00000615468 RIMBP3CA6NJZ7 1639 aa12.42□□□□□ -0.42
TNFAIP3-208ENST00000615468 RIMBP3BA6NNM3 1639 aa12.42□□□□□ -0.42
TNFAIP3-208ENST00000615468 RIMBP3Q9UFD9 1639 aa12.42□□□□□ -0.42
TNFAIP3-208ENST00000615468 MCCP23508 829 aa12.42□□□□□ -0.42
TNFAIP3-208ENST00000615468 CEP152O94986 1710 aa12.41□□□□□ -0.42
TNFAIP3-208ENST00000615468 MX1P20591 662 aa12.41□□□□□ -0.42
TNFAIP3-208ENST00000615468 TTC22Q5TAA0 569 aa12.41□□□□□ -0.42
TNFAIP3-208ENST00000615468 OTUD7AQ8TE49 926 aaPredicted RBP12.41□□□□□ -0.42
TNFAIP3-208ENST00000615468 SDSP20132 328 aa12.41□□□□□ -0.42
TNFAIP3-208ENST00000615468 TMPOP42166 694 aaKnown RBP12.41□□□□□ -0.42
TNFAIP3-208ENST00000615468 CABP1Q9NZU7 370 aa12.41□□□□□ -0.42
TNFAIP3-208ENST00000615468 HECW2Q9P2P5 1572 aa12.41□□□□□ -0.42
TNFAIP3-208ENST00000615468 NPC1L1Q9UHC9 1359 aa12.41□□□□□ -0.42
TNFAIP3-208ENST00000615468 NSD3Q9BZ95 1437 aa12.41□□□□□ -0.42
TNFAIP3-208ENST00000615468 GTF3C6Q969F1 213 aa12.41□□□□□ -0.42
TNFAIP3-208ENST00000615468 ANO2Q9NQ90 1003 aa12.41□□□□□ -0.42
TNFAIP3-208ENST00000615468 NCKAP5LQ9HCH0 1330 aa12.4□□□□□ -0.42
TNFAIP3-208ENST00000615468 ERC2O15083 957 aa12.4□□□□□ -0.42
TNFAIP3-208ENST00000615468 CAPN2P17655 700 aa12.4□□□□□ -0.42
TNFAIP3-208ENST00000615468 CHMP4CQ96CF2 233 aa12.4□□□□□ -0.42
TNFAIP3-208ENST00000615468 TSPYL1Q9H0U9 437 aa12.4□□□□□ -0.42
TNFAIP3-208ENST00000615468 WDR33Q9C0J8 1336 aaKnown RBP12.4□□□□□ -0.42
TNFAIP3-208ENST00000615468 MORC2Q9Y6X9 1032 aaPredicted RBP12.4□□□□□ -0.42
TNFAIP3-208ENST00000615468 POLR3GO15318 223 aaPredicted RBP12.4□□□□□ -0.42
TNFAIP3-208ENST00000615468 ZNF397Q8NF99 534 aaPredicted RBP12.4□□□□□ -0.42
TNFAIP3-208ENST00000615468 RBM33Q96EV2 1170 aaKnown RBP12.4□□□□□ -0.42
TNFAIP3-208ENST00000615468 ZBTB7BO15156 539 aaPredicted RBP12.39□□□□□ -0.43
TNFAIP3-208ENST00000615468 HNRNPH2P55795 449 aaKnown RBP12.39□□□□□ -0.43
TNFAIP3-208ENST00000615468 CDK19Q9BWU1 502 aa12.39□□□□□ -0.43
TNFAIP3-208ENST00000615468 EFCAB6Q5THR3 1501 aa12.39□□□□□ -0.43
TNFAIP3-208ENST00000615468 TET3O43151 1660 aa12.39□□□□□ -0.43
TNFAIP3-208ENST00000615468 PPRC1Q5VV67 1664 aaKnown RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms