RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 TMEM132EQ6IEE7 984 aa5.38□□□□□ -1.55
CHD9-221ENST00000615216 PDRG1Q9NUG6 133 aa5.38□□□□□ -1.55
CHD9-221ENST00000615216 DESP17661 470 aa5.38□□□□□ -1.55
CHD9-221ENST00000615216 CCDC181Q5TID7 509 aa5.38□□□□□ -1.55
CHD9-221ENST00000615216 AXDND1Q5T1B0 1012 aaPredicted RBP5.38□□□□□ -1.55
CHD9-221ENST00000615216 KRI1Q8N9T8 703 aaKnown RBP5.38□□□□□ -1.55
CHD9-221ENST00000615216 DEF6Q9H4E7 631 aa5.38□□□□□ -1.55
CHD9-221ENST00000615216 ALDH1L2Q3SY69 923 aa5.38□□□□□ -1.55
CHD9-221ENST00000615216 THEMISQ8N1K5 641 aaPredicted RBP5.38□□□□□ -1.55
CHD9-221ENST00000615216 SPATA32Q96LK8 384 aa5.38□□□□□ -1.55
CHD9-221ENST00000615216 TTLL5Q6EMB2 1281 aa5.38□□□□□ -1.55
CHD9-221ENST00000615216 MCM3P25205 808 aa5.38□□□□□ -1.55
CHD9-221ENST00000615216 ESCO1Q5FWF5 840 aa5.38□□□□□ -1.55
CHD9-221ENST00000615216 LARP1BQ659C4 914 aaKnown RBP5.38□□□□□ -1.55
CHD9-221ENST00000615216 BLOC1S2Q6QNY1 142 aa5.38□□□□□ -1.55
CHD9-221ENST00000615216 NAIPQ13075 1403 aa5.38□□□□□ -1.55
CHD9-221ENST00000615216 RALGAPBQ86X10 1494 aa5.38□□□□□ -1.55
CHD9-221ENST00000615216 CFAP70Q5T0N1 1121 aa5.37□□□□□ -1.55
CHD9-221ENST00000615216 SOGA3Q5TF21 947 aa5.37□□□□□ -1.55
CHD9-221ENST00000615216 AACSQ86V21 672 aa5.37□□□□□ -1.55
CHD9-221ENST00000615216 NUP62CLQ9H1M0 184 aa5.37□□□□□ -1.55
CHD9-221ENST00000615216 C1orf115Q9H7X2 142 aa5.37□□□□□ -1.55
CHD9-221ENST00000615216 PHAXQ9H814 394 aaKnown RBP5.37□□□□□ -1.55
CHD9-221ENST00000615216 SEPT7Q16181 437 aaKnown RBP5.37□□□□□ -1.55
CHD9-221ENST00000615216 DNAI2Q9GZS0 605 aa5.37□□□□□ -1.55
CHD9-221ENST00000615216 NCOA1Q15788 1441 aa5.37□□□□□ -1.55
CHD9-221ENST00000615216 GBP2P32456 591 aaPredicted RBP5.37□□□□□ -1.55
CHD9-221ENST00000615216 ARHGEF11O15085 1522 aa5.37□□□□□ -1.55
CHD9-221ENST00000615216 NFE2L2Q16236 605 aa5.37□□□□□ -1.55
CHD9-221ENST00000615216 ZNF530Q6P9A1 599 aaPredicted RBP5.37□□□□□ -1.55
CHD9-221ENST00000615216 PDCL2Q8N4E4 241 aa5.37□□□□□ -1.55
CHD9-221ENST00000615216 ZNF397Q8NF99 534 aaPredicted RBP5.37□□□□□ -1.55
CHD9-221ENST00000615216 PEG3Q9GZU2 1588 aa5.37□□□□□ -1.55
CHD9-221ENST00000615216 TRIM21P19474 475 aaKnown RBP5.37□□□□□ -1.55
CHD9-221ENST00000615216 CDCA7LQ96GN5 454 aa5.37□□□□□ -1.55
CHD9-221ENST00000615216 ZNF287Q9HBT7 754 aa5.37□□□□□ -1.55
CHD9-221ENST00000615216 SH2B1Q9NRF2 756 aaPredicted RBP5.37□□□□□ -1.55
CHD9-221ENST00000615216 BMP2KQ9NSY1 1161 aaPredicted RBP5.37□□□□□ -1.55
CHD9-221ENST00000615216 USP8P40818 1118 aa5.37□□□□□ -1.55
CHD9-221ENST00000615216 NUTM2GQ5VZR2 741 aa5.37□□□□□ -1.55
CHD9-221ENST00000615216 SPC24Q8NBT2 197 aa5.37□□□□□ -1.55
CHD9-221ENST00000615216 BTBD11A6QL63 1104 aa5.37□□□□□ -1.55
CHD9-221ENST00000615216 TXNDC2Q86VQ3 553 aa5.37□□□□□ -1.55
CHD9-221ENST00000615216 MPHOSPH8Q99549 860 aa5.37□□□□□ -1.55
CHD9-221ENST00000615216 IMMTQ16891 758 aaKnown RBP5.37□□□□□ -1.55
CHD9-221ENST00000615216 JAKMIP3Q5VZ66 844 aa5.37□□□□□ -1.55
CHD9-221ENST00000615216 SULT6B1Q6IMI4 303 aa5.37□□□□□ -1.55
CHD9-221ENST00000615216 RPAP2Q8IXW5 612 aaPredicted RBP5.37□□□□□ -1.55
CHD9-221ENST00000615216 TSR2Q969E8 191 aaKnown RBP5.37□□□□□ -1.55
CHD9-221ENST00000615216 UBAC1Q9BSL1 405 aa5.37□□□□□ -1.55
CHD9-221ENST00000615216 CCDC148Q8NFR7 591 aa5.36□□□□□ -1.55
CHD9-221ENST00000615216 TSPYL1Q9H0U9 437 aa5.36□□□□□ -1.55
CHD9-221ENST00000615216 BRPF1P55201 1214 aaPredicted RBP5.36□□□□□ -1.55
CHD9-221ENST00000615216 MAP3K11Q16584 847 aa5.36□□□□□ -1.55
CHD9-221ENST00000615216 SCAF11Q99590 1463 aaKnown RBP5.36□□□□□ -1.55
CHD9-221ENST00000615216 U3KPZ7 1027 aaPredicted RBP5.36□□□□□ -1.55
CHD9-221ENST00000615216 PBRM1Q86U86 1689 aa5.36□□□□□ -1.55
CHD9-221ENST00000615216 GNAT3A8MTJ3 354 aa5.36□□□□□ -1.55
CHD9-221ENST00000615216 INCENPQ9NQS7 918 aa5.36□□□□□ -1.55
CHD9-221ENST00000615216 UQCRHLA0A096LP55 91 aa5.36□□□□□ -1.55
CHD9-221ENST00000615216 UQCRHP07919 91 aa5.36□□□□□ -1.55
CHD9-221ENST00000615216 MAP9Q49MG5 647 aa5.36□□□□□ -1.55
CHD9-221ENST00000615216 GBP3Q9H0R5 595 aa5.36□□□□□ -1.55
CHD9-221ENST00000615216 AKAP2Q9Y2D5 859 aa5.36□□□□□ -1.55
CHD9-221ENST00000615216 HMGB1P09429 215 aaKnown RBP5.36□□□□□ -1.55
CHD9-221ENST00000615216 EZRP15311 586 aaKnown RBP5.36□□□□□ -1.55
CHD9-221ENST00000615216 CCDC183Q5T5S1 534 aa5.36□□□□□ -1.55
CHD9-221ENST00000615216 RRP9O43818 475 aaKnown RBP5.36□□□□□ -1.55
CHD9-221ENST00000615216 UPF3BQ9BZI7 483 aaKnown RBP5.36□□□□□ -1.55
CHD9-221ENST00000615216 JAKMIP1Q96N16 626 aaKnown RBP5.36□□□□□ -1.55
CHD9-221ENST00000615216 CTAGE5O15320 804 aa5.35□□□□□ -1.55
CHD9-221ENST00000615216 PPP1R12BO60237 982 aaPredicted RBP5.35□□□□□ -1.55
CHD9-221ENST00000615216 BCAR3O75815 825 aa5.35□□□□□ -1.55
CHD9-221ENST00000615216 TDO2P48775 406 aa5.35□□□□□ -1.55
CHD9-221ENST00000615216 CEBPZQ03701 1054 aaKnown RBP5.35□□□□□ -1.55
CHD9-221ENST00000615216 ASXL1Q8IXJ9 1541 aa5.35□□□□□ -1.55
CHD9-221ENST00000615216 FGFR1OPO95684 399 aaKnown RBP5.35□□□□□ -1.55
CHD9-221ENST00000615216 SLFN5Q08AF3 891 aa5.35□□□□□ -1.55
CHD9-221ENST00000615216 KCNH5Q8NCM2 988 aa5.35□□□□□ -1.55
CHD9-221ENST00000615216 FMNL2Q96PY5 1086 aa5.35□□□□□ -1.55
CHD9-221ENST00000615216 CASTP20810 708 aaKnown RBP5.35□□□□□ -1.55
CHD9-221ENST00000615216 DUOX2Q9NRD8 1548 aa5.35□□□□□ -1.55
CHD9-221ENST00000615216 ADGRL1O94910 1474 aa5.35□□□□□ -1.55
CHD9-221ENST00000615216 POTEJP0CG39 1038 aa5.35□□□□□ -1.55
CHD9-221ENST00000615216 RBM42Q9BTD8 480 aaKnown RBP5.35□□□□□ -1.55
CHD9-221ENST00000615216 CABP1Q9NZU7 370 aa5.35□□□□□ -1.55
CHD9-221ENST00000615216 PTPRCP08575 1304 aa5.35□□□□□ -1.55
CHD9-221ENST00000615216 SRGAP3O43295 1099 aa5.35□□□□□ -1.55
CHD9-221ENST00000615216 ZSCAN12O43309 604 aa5.35□□□□□ -1.55
CHD9-221ENST00000615216 EPB41L2O43491 1005 aaKnown RBP5.35□□□□□ -1.55
CHD9-221ENST00000615216 KIF1BPQ96EK5 621 aa5.35□□□□□ -1.55
CHD9-221ENST00000615216 MCM4P33991 863 aa5.35□□□□□ -1.55
CHD9-221ENST00000615216 ENOX2Q16206 610 aaKnown RBP5.35□□□□□ -1.55
CHD9-221ENST00000615216 KIAA1328Q86T90 577 aa5.35□□□□□ -1.55
CHD9-221ENST00000615216 STK3Q13188 491 aa5.35□□□□□ -1.55
CHD9-221ENST00000615216 SLC26A8Q96RN1 970 aa5.35□□□□□ -1.55
CHD9-221ENST00000615216 TANGO6Q9C0B7 1094 aa5.35□□□□□ -1.55
CHD9-221ENST00000615216 SEC63Q9UGP8 760 aaKnown RBP5.35□□□□□ -1.55
CHD9-221ENST00000615216 CFAP65Q6ZU64 1925 aaKnown RBP5.35□□□□□ -1.55
CHD9-221ENST00000615216 IGHMBP2P38935 993 aaKnown RBP5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms