RNA–Protein interactions for RNA: ENST00000613790.4

LINC01660-201, Transcript of long intergenic non-protein coding RNA 1660, humanhuman

TSL 4

Gene LINC01660, Length 557 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01660-201ENST00000613790 EYA1Q99502 592 aa13.51□□□□□ -0.25
LINC01660-201ENST00000613790 PCDH11XQ9BZA7 1347 aa13.5□□□□□ -0.25
LINC01660-201ENST00000613790 PCDH11YQ9BZA8 1340 aa13.5□□□□□ -0.25
LINC01660-201ENST00000613790 DDX10Q13206 875 aaKnown RBP13.49□□□□□ -0.25
LINC01660-201ENST00000613790 ZCRB1Q8TBF4 217 aaKnown RBP13.49□□□□□ -0.25
LINC01660-201ENST00000613790 PPP2R1AP30153 589 aa13.48□□□□□ -0.25
LINC01660-201ENST00000613790 IL13P35225 146 aa13.48□□□□□ -0.25
LINC01660-201ENST00000613790 BAG6P46379 1132 aa13.48□□□□□ -0.25
LINC01660-201ENST00000613790 CNGB1Q14028 1251 aaPredicted RBP13.48□□□□□ -0.25
LINC01660-201ENST00000613790 CFAP53Q96M91 514 aa13.48□□□□□ -0.25
LINC01660-201ENST00000613790 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.48□□□□□ -0.25
LINC01660-201ENST00000613790 SBF2Q86WG5 1849 aa13.48□□□□□ -0.25
LINC01660-201ENST00000613790 DOT1LQ8TEK3 1739 aa13.47□□□□□ -0.25
LINC01660-201ENST00000613790 ZNF316A6NFI3 1004 aaPredicted RBP13.47□□□□□ -0.25
LINC01660-201ENST00000613790 DIAPH1O60610 1272 aaKnown RBP13.47□□□□□ -0.25
LINC01660-201ENST00000613790 RALBP1Q15311 655 aa13.47□□□□□ -0.25
LINC01660-201ENST00000613790 TRIM37O94972 964 aa13.46□□□□□ -0.25
LINC01660-201ENST00000613790 SPG7Q9UQ90 795 aa13.46□□□□□ -0.25
LINC01660-201ENST00000613790 RREB1Q92766 1687 aa13.46□□□□□ -0.26
LINC01660-201ENST00000613790 DDX54Q8TDD1 881 aaKnown RBP13.45□□□□□ -0.26
LINC01660-201ENST00000613790 BCL11BQ9C0K0 894 aaPredicted RBP13.45□□□□□ -0.26
LINC01660-201ENST00000613790 APBA3O96018 575 aa13.43□□□□□ -0.26
LINC01660-201ENST00000613790 AMOTQ4VCS5 1084 aa13.43□□□□□ -0.26
LINC01660-201ENST00000613790 SULT6B1Q6IMI4 303 aa13.43□□□□□ -0.26
LINC01660-201ENST00000613790 AEBP1Q8IUX7 1158 aa13.43□□□□□ -0.26
LINC01660-201ENST00000613790 MYBBP1AQ9BQG0 1328 aaKnown RBP13.42□□□□□ -0.26
LINC01660-201ENST00000613790 TOGARAM1Q9Y4F4 1720 aa13.42□□□□□ -0.26
LINC01660-201ENST00000613790 CYP27B1O15528 508 aa13.42□□□□□ -0.26
LINC01660-201ENST00000613790 DEFB132Q7Z7B7 95 aa13.42□□□□□ -0.26
LINC01660-201ENST00000613790 NUDCQ9Y266 331 aa13.42□□□□□ -0.26
LINC01660-201ENST00000613790 BTAF1O14981 1849 aa13.41□□□□□ -0.26
LINC01660-201ENST00000613790 PLEKHO1Q53GL0 409 aaPredicted RBP13.41□□□□□ -0.26
LINC01660-201ENST00000613790 NUP188Q5SRE5 1749 aa13.4□□□□□ -0.26
LINC01660-201ENST00000613790 PLSCR1O15162 318 aa13.4□□□□□ -0.26
LINC01660-201ENST00000613790 PHKG2P15735 406 aa13.4□□□□□ -0.26
LINC01660-201ENST00000613790 NKX1-1Q15270 411 aaPredicted RBP13.4□□□□□ -0.26
LINC01660-201ENST00000613790 IFNL2Q8IZJ0 200 aa13.4□□□□□ -0.26
LINC01660-201ENST00000613790 ACSBG1Q96GR2 724 aa13.4□□□□□ -0.26
LINC01660-201ENST00000613790 CAMKK2Q96RR4 588 aa13.4□□□□□ -0.26
LINC01660-201ENST00000613790 U2SURPO15042 1029 aaKnown RBP13.39□□□□□ -0.27
LINC01660-201ENST00000613790 HSP90AB1P08238 724 aaKnown RBP13.39□□□□□ -0.27
LINC01660-201ENST00000613790 EN1Q05925 392 aaPredicted RBP13.39□□□□□ -0.27
LINC01660-201ENST00000613790 KCNQ2O43526 872 aa13.38□□□□□ -0.27
LINC01660-201ENST00000613790 HMOX1P09601 288 aa13.38□□□□□ -0.27
LINC01660-201ENST00000613790 ZNF530Q6P9A1 599 aaPredicted RBP13.38□□□□□ -0.27
LINC01660-201ENST00000613790 PRKRIP1Q9H875 184 aaPredicted RBP13.38□□□□□ -0.27
LINC01660-201ENST00000613790 EZH2Q15910 746 aaKnown RBP13.37□□□□□ -0.27
LINC01660-201ENST00000613790 C1orf141Q5JVX7 400 aa13.37□□□□□ -0.27
LINC01660-201ENST00000613790 PTF1AQ7RTS3 328 aa13.37□□□□□ -0.27
LINC01660-201ENST00000613790 KDM6AO15550 1401 aaPredicted RBP13.37□□□□□ -0.27
LINC01660-201ENST00000613790 ADAMTS7Q9UKP4 1686 aa13.37□□□□□ -0.27
LINC01660-201ENST00000613790 MRC1P22897 1456 aa13.36□□□□□ -0.27
LINC01660-201ENST00000613790 PRIM1P49642 420 aaKnown RBP13.36□□□□□ -0.27
LINC01660-201ENST00000613790 SYTL4Q96C24 671 aaPredicted RBP13.36□□□□□ -0.27
LINC01660-201ENST00000613790 DCAF5Q96JK2 942 aa13.36□□□□□ -0.27
LINC01660-201ENST00000613790 RSPH6AQ9H0K4 717 aa13.36□□□□□ -0.27
LINC01660-201ENST00000613790 PAPPAQ13219 1627 aa13.35□□□□□ -0.27
LINC01660-201ENST00000613790 U2AF1L5P0DN76 240 aaPredicted RBP13.35□□□□□ -0.27
LINC01660-201ENST00000613790 U2AF1Q01081 240 aaKnown RBP eCLIP13.35□□□□□ -0.27
LINC01660-201ENST00000613790 AKAP4Q5JQC9 854 aa13.35□□□□□ -0.27
LINC01660-201ENST00000613790 LY75O60449 1722 aa13.35□□□□□ -0.27
LINC01660-201ENST00000613790 FCHSD2O94868 740 aa13.34□□□□□ -0.27
LINC01660-201ENST00000613790 PRKAR2BP31323 418 aa13.34□□□□□ -0.27
LINC01660-201ENST00000613790 GAS2L2Q8NHY3 880 aa13.34□□□□□ -0.27
LINC01660-201ENST00000613790 ITGB4P16144 1822 aa13.34□□□□□ -0.27
LINC01660-201ENST00000613790 MAP3K5Q99683 1374 aa13.33□□□□□ -0.27
LINC01660-201ENST00000613790 ERVV-2B6SEH9 535 aa13.33□□□□□ -0.28
LINC01660-201ENST00000613790 TMOD3Q9NYL9 352 aa13.33□□□□□ -0.28
LINC01660-201ENST00000613790 PALLDQ8WX93 1383 aa13.32□□□□□ -0.28
LINC01660-201ENST00000613790 SCN11AQ9UI33 1791 aa13.32□□□□□ -0.28
LINC01660-201ENST00000613790 TXNRD1Q16881 649 aa13.32□□□□□ -0.28
LINC01660-201ENST00000613790 SLC27A3Q5K4L6 730 aa13.32□□□□□ -0.28
LINC01660-201ENST00000613790 MTHFSDQ2M296 383 aaKnown RBP13.31□□□□□ -0.28
LINC01660-201ENST00000613790 NBPF14Q5TI25 921 aa13.31□□□□□ -0.28
LINC01660-201ENST00000613790 MPRIPQ6WCQ1 1025 aa13.31□□□□□ -0.28
LINC01660-201ENST00000613790 SMARCC1Q92922 1105 aaPredicted RBP13.31□□□□□ -0.28
LINC01660-201ENST00000613790 PNNQ9H307 717 aaKnown RBP13.31□□□□□ -0.28
LINC01660-201ENST00000613790 ANP32CO43423 234 aa13.3□□□□□ -0.28
LINC01660-201ENST00000613790 NEFMP07197 916 aa13.3□□□□□ -0.28
LINC01660-201ENST00000613790 HMGB2P26583 209 aaKnown RBP13.3□□□□□ -0.28
LINC01660-201ENST00000613790 PIGBQ92521 554 aa13.3□□□□□ -0.28
LINC01660-201ENST00000613790 ZNF831Q5JPB2 1677 aa13.3□□□□□ -0.28
LINC01660-201ENST00000613790 CICQ96RK0 1608 aaPredicted RBP13.29□□□□□ -0.28
LINC01660-201ENST00000613790 PROM2Q8N271 834 aa13.29□□□□□ -0.28
LINC01660-201ENST00000613790 C5P01031 1676 aa13.28□□□□□ -0.28
LINC01660-201ENST00000613790 GNAT3A8MTJ3 354 aa13.28□□□□□ -0.28
LINC01660-201ENST00000613790 CABP4P57796 275 aa13.28□□□□□ -0.28
LINC01660-201ENST00000613790 WDR43Q15061 677 aaKnown RBP eCLIP13.28□□□□□ -0.28
LINC01660-201ENST00000613790 MAPK8IP3Q9UPT6 1336 aa13.28□□□□□ -0.28
LINC01660-201ENST00000613790 RNMTO43148 476 aaKnown RBP13.27□□□□□ -0.29
LINC01660-201ENST00000613790 PHACTR3Q96KR7 559 aa13.27□□□□□ -0.29
LINC01660-201ENST00000613790 SLC52A2Q9HAB3 445 aa13.27□□□□□ -0.29
LINC01660-201ENST00000613790 ANO8Q9HCE9 1232 aaPredicted RBP13.27□□□□□ -0.29
LINC01660-201ENST00000613790 CCNL1Q9UK58 526 aaPredicted RBP13.27□□□□□ -0.29
LINC01660-201ENST00000613790 CEMIPQ8WUJ3 1361 aa13.27□□□□□ -0.29
LINC01660-201ENST00000613790 QSER1Q2KHR3 1735 aa13.26□□□□□ -0.29
LINC01660-201ENST00000613790 PLEKHF1Q96S99 279 aa13.26□□□□□ -0.29
LINC01660-201ENST00000613790 STK32BQ9NY57 414 aa13.26□□□□□ -0.29
LINC01660-201ENST00000613790 VIRMAQ69YN4 1812 aaKnown RBP13.25□□□□□ -0.29
LINC01660-201ENST00000613790 LRP5O75197 1615 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms