RNA–Protein interactions for RNA: ENST00000613394.4

HPS1-215, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS1, Length 3,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-215ENST00000613394 TAOK2Q9UL54 1235 aa16.82■□□□□ 0.28
HPS1-215ENST00000613394 LRRCC1Q9C099 1032 aa16.81■□□□□ 0.28
HPS1-215ENST00000613394 POGZQ7Z3K3 1410 aa16.81■□□□□ 0.28
HPS1-215ENST00000613394 DDX54Q8TDD1 881 aaKnown RBP16.81■□□□□ 0.28
HPS1-215ENST00000613394 ZNF692Q9BU19 519 aaPredicted RBP16.81■□□□□ 0.28
HPS1-215ENST00000613394 QRICH2Q9H0J4 1663 aa16.81■□□□□ 0.28
HPS1-215ENST00000613394 KIF2CQ99661 725 aa16.81■□□□□ 0.28
HPS1-215ENST00000613394 TULP4Q9NRJ4 1543 aa16.8■□□□□ 0.28
HPS1-215ENST00000613394 XPCQ01831 940 aaPredicted RBP16.8■□□□□ 0.28
HPS1-215ENST00000613394 ZSCAN23Q3MJ62 389 aa16.8■□□□□ 0.28
HPS1-215ENST00000613394 PPRC1Q5VV67 1664 aaKnown RBP16.8■□□□□ 0.28
HPS1-215ENST00000613394 UBTFL1P0CB47 393 aaPredicted RBP16.8■□□□□ 0.28
HPS1-215ENST00000613394 PRIM1P49642 420 aaKnown RBP16.8■□□□□ 0.28
HPS1-215ENST00000613394 YEATS2Q9ULM3 1422 aa16.79■□□□□ 0.28
HPS1-215ENST00000613394 ZSCAN30Q86W11 494 aa16.79■□□□□ 0.28
HPS1-215ENST00000613394 USHBP1Q8N6Y0 703 aa16.79■□□□□ 0.28
HPS1-215ENST00000613394 ABCC4O15439 1325 aa16.79■□□□□ 0.28
HPS1-215ENST00000613394 MSH6P52701 1360 aa16.79■□□□□ 0.28
HPS1-215ENST00000613394 NCBP3Q53F19 620 aaKnown RBP16.79■□□□□ 0.28
HPS1-215ENST00000613394 ERBB4Q15303 1308 aa16.78■□□□□ 0.28
HPS1-215ENST00000613394 ZMYM3Q14202 1370 aa16.78■□□□□ 0.28
HPS1-215ENST00000613394 PDE1AP54750 535 aa16.78■□□□□ 0.28
HPS1-215ENST00000613394 LRRFIP2Q9Y608 721 aaKnown RBP16.78■□□□□ 0.28
HPS1-215ENST00000613394 ACEP12821 1306 aa16.78■□□□□ 0.28
HPS1-215ENST00000613394 CWC22Q9HCG8 908 aaKnown RBP16.78■□□□□ 0.28
HPS1-215ENST00000613394 TRHP20396 242 aaPredicted RBP16.78■□□□□ 0.28
HPS1-215ENST00000613394 CCT4P50991 539 aaKnown RBP16.78■□□□□ 0.28
HPS1-215ENST00000613394 SYAP1Q96A49 352 aaPredicted RBP16.78■□□□□ 0.28
HPS1-215ENST00000613394 MX1P20591 662 aa16.77■□□□□ 0.28
HPS1-215ENST00000613394 TMX3Q96JJ7 454 aa16.77■□□□□ 0.28
HPS1-215ENST00000613394 CCDC9Q9Y3X0 531 aaKnown RBP16.77■□□□□ 0.28
HPS1-215ENST00000613394 GNAI3P08754 354 aa16.77■□□□□ 0.27
HPS1-215ENST00000613394 ADGRB3O60242 1522 aa16.76■□□□□ 0.27
HPS1-215ENST00000613394 GLI2P10070 1586 aa16.76■□□□□ 0.27
HPS1-215ENST00000613394 RIMS2Q9UQ26 1411 aa16.76■□□□□ 0.27
HPS1-215ENST00000613394 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.76■□□□□ 0.27
HPS1-215ENST00000613394 HDGFL1Q5TGJ6 251 aa16.76■□□□□ 0.27
HPS1-215ENST00000613394 CCDC30Q5VVM6 783 aa16.76■□□□□ 0.27
HPS1-215ENST00000613394 MROH2AA6NES4 1674 aa16.76■□□□□ 0.27
HPS1-215ENST00000613394 FIBPO43427 364 aa16.75■□□□□ 0.27
HPS1-215ENST00000613394 ANXA1P04083 346 aa16.75■□□□□ 0.27
HPS1-215ENST00000613394 MTHFSDQ2M296 383 aaKnown RBP16.75■□□□□ 0.27
HPS1-215ENST00000613394 RBM33Q96EV2 1170 aaKnown RBP16.75■□□□□ 0.27
HPS1-215ENST00000613394 RBSNQ9H1K0 784 aa16.75■□□□□ 0.27
HPS1-215ENST00000613394 ZFYVE9O95405 1425 aa16.75■□□□□ 0.27
HPS1-215ENST00000613394 FLIIQ13045 1269 aa16.75■□□□□ 0.27
HPS1-215ENST00000613394 VPS37CA5D8V6 355 aaPredicted RBP16.74■□□□□ 0.27
HPS1-215ENST00000613394 NAP1L2Q9ULW6 460 aaPredicted RBP16.74■□□□□ 0.27
HPS1-215ENST00000613394 DIAPH3Q9NSV4 1193 aa16.74■□□□□ 0.27
HPS1-215ENST00000613394 EID1Q9Y6B2 187 aa16.74■□□□□ 0.27
HPS1-215ENST00000613394 TTC21BQ7Z4L5 1316 aa16.74■□□□□ 0.27
HPS1-215ENST00000613394 CWC27Q6UX04 472 aaKnown RBP16.73■□□□□ 0.27
HPS1-215ENST00000613394 SRGAP3O43295 1099 aa16.73■□□□□ 0.27
HPS1-215ENST00000613394 CEBPAP49715 358 aaPredicted RBP16.73■□□□□ 0.27
HPS1-215ENST00000613394 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.73■□□□□ 0.27
HPS1-215ENST00000613394 ABCC3O15438 1527 aa16.73■□□□□ 0.27
HPS1-215ENST00000613394 GOLGA6L4A6NEF3 574 aa16.73■□□□□ 0.27
HPS1-215ENST00000613394 KIAA2012Q0VF49 1180 aa16.73■□□□□ 0.27
HPS1-215ENST00000613394 ADGRB1O14514 1584 aa16.72■□□□□ 0.27
HPS1-215ENST00000613394 INO80Q9ULG1 1556 aaPredicted RBP16.72■□□□□ 0.27
HPS1-215ENST00000613394 ZNF853P0CG23 659 aa16.72■□□□□ 0.27
HPS1-215ENST00000613394 ABTB2Q8N961 1025 aa16.72■□□□□ 0.27
HPS1-215ENST00000613394 LMBRD1Q9NUN5 540 aa16.72■□□□□ 0.27
HPS1-215ENST00000613394 CHL1O00533 1208 aa16.72■□□□□ 0.27
HPS1-215ENST00000613394 UBE2Q2Q8WVN8 375 aa16.72■□□□□ 0.27
HPS1-215ENST00000613394 C9orf78Q9NZ63 289 aaPredicted RBP16.72■□□□□ 0.27
HPS1-215ENST00000613394 FGD1P98174 961 aa16.71■□□□□ 0.27
HPS1-215ENST00000613394 TEFQ10587 303 aa16.71■□□□□ 0.27
HPS1-215ENST00000613394 SMC3Q9UQE7 1217 aa16.71■□□□□ 0.27
HPS1-215ENST00000613394 PTPRCP08575 1304 aa16.71■□□□□ 0.27
HPS1-215ENST00000613394 PNMA6EA0A0J9YXQ4 647 aa16.71■□□□□ 0.27
HPS1-215ENST00000613394 SPG7Q9UQ90 795 aa16.71■□□□□ 0.27
HPS1-215ENST00000613394 AIMP1Q12904 312 aaKnown RBP16.71■□□□□ 0.27
HPS1-215ENST00000613394 TSPY26PQ9H489 355 aa16.71■□□□□ 0.27
HPS1-215ENST00000613394 MBD3O95983 291 aa16.7■□□□□ 0.26
HPS1-215ENST00000613394 BCL11BQ9C0K0 894 aaPredicted RBP16.7■□□□□ 0.26
HPS1-215ENST00000613394 FAM135BQ49AJ0 1406 aa16.7■□□□□ 0.26
HPS1-215ENST00000613394 ESYT1Q9BSJ8 1104 aa16.7■□□□□ 0.26
HPS1-215ENST00000613394 PALD1Q9ULE6 856 aa16.7■□□□□ 0.26
HPS1-215ENST00000613394 NRXN1Q9ULB1 1477 aa16.7■□□□□ 0.26
HPS1-215ENST00000613394 KIAA1210Q9ULL0 1709 aa16.69■□□□□ 0.26
HPS1-215ENST00000613394 DRC7Q8IY82 874 aa16.69■□□□□ 0.26
HPS1-215ENST00000613394 ARAP3Q8WWN8 1544 aa16.69■□□□□ 0.26
HPS1-215ENST00000613394 ZNF830Q96NB3 372 aaPredicted RBP16.69■□□□□ 0.26
HPS1-215ENST00000613394 RTL1A6NKG5 1358 aa16.69■□□□□ 0.26
HPS1-215ENST00000613394 LRRC7Q96NW7 1537 aa16.68■□□□□ 0.26
HPS1-215ENST00000613394 SETBP1Q9Y6X0 1596 aa16.68■□□□□ 0.26
HPS1-215ENST00000613394 KIDINS220Q9ULH0 1771 aa16.68■□□□□ 0.26
HPS1-215ENST00000613394 PHF14O94880 888 aa16.68■□□□□ 0.26
HPS1-215ENST00000613394 TMEM63CQ9P1W3 806 aa16.68■□□□□ 0.26
HPS1-215ENST00000613394 MLH3Q9UHC1 1453 aa16.68■□□□□ 0.26
HPS1-215ENST00000613394 SHPRHQ149N8 1683 aa16.68■□□□□ 0.26
HPS1-215ENST00000613394 CPA1P15085 419 aa16.68■□□□□ 0.26
HPS1-215ENST00000613394 SRCIN1Q9C0H9 1055 aa16.68■□□□□ 0.26
HPS1-215ENST00000613394 NSFL1CQ9UNZ2 370 aaKnown RBP16.68■□□□□ 0.26
HPS1-215ENST00000613394 BRPF1P55201 1214 aaPredicted RBP16.67■□□□□ 0.26
HPS1-215ENST00000613394 MAP3K19Q56UN5 1328 aa16.67■□□□□ 0.26
HPS1-215ENST00000613394 METP08581 1390 aa16.67■□□□□ 0.26
HPS1-215ENST00000613394 PNPLA6Q8IY17 1366 aa16.67■□□□□ 0.26
HPS1-215ENST00000613394 GNAT3A8MTJ3 354 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms