RNA–Protein interactions for RNA: ENST00000613228.1

PDE6A-204, Transcript of phosphodiesterase 6A, humanhuman

TSL 5 BASIC

Gene PDE6A, Length 5,398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-204ENST00000613228 LNPKQ9C0E8 428 aa10.54□□□□□ -0.72
PDE6A-204ENST00000613228 BABAM1Q9NWV8 329 aa10.54□□□□□ -0.72
PDE6A-204ENST00000613228 CHD1LQ86WJ1 897 aa10.54□□□□□ -0.72
PDE6A-204ENST00000613228 CCDC34Q96HJ3 373 aa10.54□□□□□ -0.72
PDE6A-204ENST00000613228 CARD14Q9BXL6 1004 aa10.54□□□□□ -0.72
PDE6A-204ENST00000613228 KRT28Q7Z3Y7 464 aa10.53□□□□□ -0.72
PDE6A-204ENST00000613228 CLASRPQ8N2M8 674 aaKnown RBP10.53□□□□□ -0.72
PDE6A-204ENST00000613228 PLEKHH1Q9ULM0 1364 aa10.53□□□□□ -0.72
PDE6A-204ENST00000613228 MADDQ8WXG6 1647 aa10.53□□□□□ -0.72
PDE6A-204ENST00000613228 NUCB2P80303 420 aa10.53□□□□□ -0.72
PDE6A-204ENST00000613228 TOM1L2Q6ZVM7 507 aa10.53□□□□□ -0.72
PDE6A-204ENST00000613228 LRRCC1Q9C099 1032 aa10.53□□□□□ -0.72
PDE6A-204ENST00000613228 MEX3CQ5U5Q3 659 aaKnown RBP10.53□□□□□ -0.72
PDE6A-204ENST00000613228 NECTIN2Q92692 538 aa10.53□□□□□ -0.72
PDE6A-204ENST00000613228 GTF2E1P29083 439 aaPredicted RBP10.53□□□□□ -0.72
PDE6A-204ENST00000613228 SPRYD3Q8NCJ5 442 aa10.53□□□□□ -0.72
PDE6A-204ENST00000613228 RABEP1Q15276 862 aa10.52□□□□□ -0.72
PDE6A-204ENST00000613228 NOM1Q5C9Z4 860 aaKnown RBP10.52□□□□□ -0.72
PDE6A-204ENST00000613228 PSMA5P28066 241 aa10.52□□□□□ -0.73
PDE6A-204ENST00000613228 PRDM11Q9NQV5 511 aa10.52□□□□□ -0.73
PDE6A-204ENST00000613228 ISY1Q9ULR0 285 aaKnown RBP10.52□□□□□ -0.73
PDE6A-204ENST00000613228 CAMSAP1Q5T5Y3 1602 aa10.52□□□□□ -0.73
PDE6A-204ENST00000613228 SSH1Q8WYL5 1049 aa10.52□□□□□ -0.73
PDE6A-204ENST00000613228 SBNO1A3KN83 1393 aa10.51□□□□□ -0.73
PDE6A-204ENST00000613228 PIK3R4Q99570 1358 aa10.51□□□□□ -0.73
PDE6A-204ENST00000613228 NPHP3Q7Z494 1330 aa10.51□□□□□ -0.73
PDE6A-204ENST00000613228 BCL11BQ9C0K0 894 aaPredicted RBP10.51□□□□□ -0.73
PDE6A-204ENST00000613228 R3HCC1Q9Y3T6 440 aaKnown RBP10.51□□□□□ -0.73
PDE6A-204ENST00000613228 TMEM57Q8N5G2 664 aa10.51□□□□□ -0.73
PDE6A-204ENST00000613228 POLKQ9UBT6 870 aa10.51□□□□□ -0.73
PDE6A-204ENST00000613228 E9PCH4 1651 aa10.51□□□□□ -0.73
PDE6A-204ENST00000613228 CEP152O94986 1710 aa10.51□□□□□ -0.73
PDE6A-204ENST00000613228 HYPKQ9NX55 129 aa10.51□□□□□ -0.73
PDE6A-204ENST00000613228 AGLP35573 1532 aa10.51□□□□□ -0.73
PDE6A-204ENST00000613228 PLEKHG3A1L390 1219 aa10.5□□□□□ -0.73
PDE6A-204ENST00000613228 AEBP2Q6ZN18 517 aaPredicted RBP10.5□□□□□ -0.73
PDE6A-204ENST00000613228 ARHGEF10O15013 1369 aa10.5□□□□□ -0.73
PDE6A-204ENST00000613228 AATKQ6ZMQ8 1374 aa10.5□□□□□ -0.73
PDE6A-204ENST00000613228 UGGT1Q9NYU2 1555 aa10.49□□□□□ -0.73
PDE6A-204ENST00000613228 TPM4P67936 248 aa10.49□□□□□ -0.73
PDE6A-204ENST00000613228 IRX3P78415 501 aaPredicted RBP10.49□□□□□ -0.73
PDE6A-204ENST00000613228 SURF6O75683 361 aaKnown RBP10.49□□□□□ -0.73
PDE6A-204ENST00000613228 HDAC1Q13547 482 aaPredicted RBP10.49□□□□□ -0.73
PDE6A-204ENST00000613228 ANO2Q9NQ90 1003 aa10.49□□□□□ -0.73
PDE6A-204ENST00000613228 KIAA1210Q9ULL0 1709 aa10.49□□□□□ -0.73
PDE6A-204ENST00000613228 KCNA6P17658 529 aa10.49□□□□□ -0.73
PDE6A-204ENST00000613228 AMOTL1Q8IY63 956 aa10.49□□□□□ -0.73
PDE6A-204ENST00000613228 C19orf44Q9H6X5 657 aa10.49□□□□□ -0.73
PDE6A-204ENST00000613228 MBIPQ9NS73 344 aa10.49□□□□□ -0.73
PDE6A-204ENST00000613228 TEX35Q5T0J7 233 aa10.48□□□□□ -0.73
PDE6A-204ENST00000613228 TEX13AQ9BXU3 409 aaPredicted RBP10.48□□□□□ -0.73
PDE6A-204ENST00000613228 AIMP1Q12904 312 aaKnown RBP10.48□□□□□ -0.73
PDE6A-204ENST00000613228 LARP1Q6PKG0 1096 aaKnown RBP10.48□□□□□ -0.73
PDE6A-204ENST00000613228 DIP2CQ9Y2E4 1556 aa10.48□□□□□ -0.73
PDE6A-204ENST00000613228 CPLX2Q6PUV4 134 aaKnown RBP10.48□□□□□ -0.73
PDE6A-204ENST00000613228 MCM10Q7L590 875 aa10.48□□□□□ -0.73
PDE6A-204ENST00000613228 NOL10Q9BSC4 688 aaKnown RBP10.48□□□□□ -0.73
PDE6A-204ENST00000613228 EIF4A2Q14240 407 aaKnown RBP10.48□□□□□ -0.73
PDE6A-204ENST00000613228 PLCB2Q00722 1185 aa10.47□□□□□ -0.73
PDE6A-204ENST00000613228 AKAP4Q5JQC9 854 aa10.47□□□□□ -0.73
PDE6A-204ENST00000613228 SYNE3Q6ZMZ3 975 aa10.47□□□□□ -0.73
PDE6A-204ENST00000613228 PAXIP1Q6ZW49 1069 aaPredicted RBP10.47□□□□□ -0.73
PDE6A-204ENST00000613228 CWC22Q9HCG8 908 aaKnown RBP10.47□□□□□ -0.73
PDE6A-204ENST00000613228 CCDC173Q0VFZ6 552 aa10.47□□□□□ -0.73
PDE6A-204ENST00000613228 IFNL2Q8IZJ0 200 aa10.47□□□□□ -0.73
PDE6A-204ENST00000613228 DBF4Q9UBU7 674 aaPredicted RBP10.47□□□□□ -0.73
PDE6A-204ENST00000613228 SLC4A3P48751 1232 aa10.47□□□□□ -0.73
PDE6A-204ENST00000613228 MAP3K5Q99683 1374 aa10.46□□□□□ -0.73
PDE6A-204ENST00000613228 TRIM27P14373 513 aa10.46□□□□□ -0.73
PDE6A-204ENST00000613228 ANKRD24Q8TF21 1146 aa10.46□□□□□ -0.73
PDE6A-204ENST00000613228 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.46□□□□□ -0.73
PDE6A-204ENST00000613228 RTL1A6NKG5 1358 aa10.46□□□□□ -0.73
PDE6A-204ENST00000613228 KIF24Q5T7B8 1368 aa10.46□□□□□ -0.73
PDE6A-204ENST00000613228 ESPNB1AK53 854 aa10.46□□□□□ -0.73
PDE6A-204ENST00000613228 STARD3NLO95772 234 aa10.46□□□□□ -0.73
PDE6A-204ENST00000613228 FAM184AQ8NB25 1140 aa10.46□□□□□ -0.74
PDE6A-204ENST00000613228 SYTL4Q96C24 671 aaPredicted RBP10.46□□□□□ -0.74
PDE6A-204ENST00000613228 STRN4Q9NRL3 753 aa10.46□□□□□ -0.74
PDE6A-204ENST00000613228 PPRC1Q5VV67 1664 aaKnown RBP10.45□□□□□ -0.74
PDE6A-204ENST00000613228 RNF123Q5XPI4 1314 aa10.45□□□□□ -0.74
PDE6A-204ENST00000613228 HMGN5P82970 282 aaKnown RBP10.45□□□□□ -0.74
PDE6A-204ENST00000613228 HSP90AB3PQ58FF7 597 aa10.45□□□□□ -0.74
PDE6A-204ENST00000613228 ZSCAN25Q6NSZ9 544 aa10.45□□□□□ -0.74
PDE6A-204ENST00000613228 H3BQV1 296 aa10.45□□□□□ -0.74
PDE6A-204ENST00000613228 IFFO2Q5TF58 517 aa10.45□□□□□ -0.74
PDE6A-204ENST00000613228 MRPL50Q8N5N7 158 aaKnown RBP10.45□□□□□ -0.74
PDE6A-204ENST00000613228 CWC15Q9P013 229 aaKnown RBP10.45□□□□□ -0.74
PDE6A-204ENST00000613228 G3V3G9 751 aa10.45□□□□□ -0.74
PDE6A-204ENST00000613228 FRAT2O75474 233 aaPredicted RBP10.45□□□□□ -0.74
PDE6A-204ENST00000613228 TRDNQ13061 729 aa10.45□□□□□ -0.74
PDE6A-204ENST00000613228 DCAF8Q5TAQ9 597 aa10.45□□□□□ -0.74
PDE6A-204ENST00000613228 SMAP1Q8IYB5 467 aaPredicted RBP10.45□□□□□ -0.74
PDE6A-204ENST00000613228 IP6K1Q92551 441 aa10.45□□□□□ -0.74
PDE6A-204ENST00000613228 KIF1BPQ96EK5 621 aa10.45□□□□□ -0.74
PDE6A-204ENST00000613228 FMNL2Q96PY5 1086 aa10.45□□□□□ -0.74
PDE6A-204ENST00000613228 CIZ1Q9ULV3 898 aaPredicted RBP10.45□□□□□ -0.74
PDE6A-204ENST00000613228 ANKARQ7Z5J8 1434 aa10.45□□□□□ -0.74
PDE6A-204ENST00000613228 DLC1Q96QB1 1528 aa10.45□□□□□ -0.74
PDE6A-204ENST00000613228 PATL2C9JE40 543 aaKnown RBP10.45□□□□□ -0.74
PDE6A-204ENST00000613228 IL13P35225 146 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms