RNA–Protein interactions for RNA: ENST00000612688.1

PPP4R3B-204, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 2

Gene PPP4R3B, Length 2,981 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-204ENST00000612688 UPF2Q9HAU5 1272 aaKnown RBP14.75□□□□□ -0.05
PPP4R3B-204ENST00000612688 SMC4Q9NTJ3 1288 aa14.75□□□□□ -0.05
PPP4R3B-204ENST00000612688 INSRP06213 1382 aa14.75□□□□□ -0.05
PPP4R3B-204ENST00000612688 CLCN1P35523 988 aa14.75□□□□□ -0.05
PPP4R3B-204ENST00000612688 EXOSC9Q06265 439 aaKnown RBP14.75□□□□□ -0.05
PPP4R3B-204ENST00000612688 MYH16Q9H6N6 1097 aa14.75□□□□□ -0.05
PPP4R3B-204ENST00000612688 LRRC59Q96AG4 307 aaKnown RBP14.74□□□□□ -0.05
PPP4R3B-204ENST00000612688 SLAIN2Q9P270 581 aa14.73□□□□□ -0.05
PPP4R3B-204ENST00000612688 CHRNA2Q15822 529 aa14.73□□□□□ -0.05
PPP4R3B-204ENST00000612688 USP31Q70CQ4 1352 aa14.73□□□□□ -0.05
PPP4R3B-204ENST00000612688 C1orf115Q9H7X2 142 aa14.73□□□□□ -0.05
PPP4R3B-204ENST00000612688 FLT4P35916 1363 aa14.72□□□□□ -0.05
PPP4R3B-204ENST00000612688 CDK12Q9NYV4 1490 aaPredicted RBP14.72□□□□□ -0.05
PPP4R3B-204ENST00000612688 ESPNB1AK53 854 aa14.72□□□□□ -0.05
PPP4R3B-204ENST00000612688 MCM10Q7L590 875 aa14.72□□□□□ -0.05
PPP4R3B-204ENST00000612688 STRCQ7RTU9 1775 aa14.72□□□□□ -0.05
PPP4R3B-204ENST00000612688 HAP1P54257 671 aaPredicted RBP14.72□□□□□ -0.05
PPP4R3B-204ENST00000612688 NFE2L2Q16236 605 aa14.72□□□□□ -0.05
PPP4R3B-204ENST00000612688 BRINP3Q76B58 766 aa14.72□□□□□ -0.05
PPP4R3B-204ENST00000612688 PIK3C2AO00443 1686 aa14.72□□□□□ -0.05
PPP4R3B-204ENST00000612688 TRAK2O60296 914 aa14.71□□□□□ -0.05
PPP4R3B-204ENST00000612688 NRKQ7Z2Y5 1582 aa14.71□□□□□ -0.05
PPP4R3B-204ENST00000612688 MST1RQ04912 1400 aa14.71□□□□□ -0.05
PPP4R3B-204ENST00000612688 LRRC7Q96NW7 1537 aa14.71□□□□□ -0.06
PPP4R3B-204ENST00000612688 LNPKQ9C0E8 428 aa14.7□□□□□ -0.06
PPP4R3B-204ENST00000612688 ANTXR1Q9H6X2 564 aa14.7□□□□□ -0.06
PPP4R3B-204ENST00000612688 FAM13BQ9NYF5 915 aa14.7□□□□□ -0.06
PPP4R3B-204ENST00000612688 SBNO1A3KN83 1393 aa14.7□□□□□ -0.06
PPP4R3B-204ENST00000612688 WDR63Q8IWG1 891 aa14.7□□□□□ -0.06
PPP4R3B-204ENST00000612688 RWDD1Q9H446 243 aaPredicted RBP14.7□□□□□ -0.06
PPP4R3B-204ENST00000612688 SSH1Q8WYL5 1049 aa14.7□□□□□ -0.06
PPP4R3B-204ENST00000612688 TBC1D32Q96NH3 1257 aa14.7□□□□□ -0.06
PPP4R3B-204ENST00000612688 MIS18AQ9NYP9 233 aa14.7□□□□□ -0.06
PPP4R3B-204ENST00000612688 NOB1Q9ULX3 412 aaKnown RBP14.7□□□□□ -0.06
PPP4R3B-204ENST00000612688 NWD1Q149M9 1564 aa14.69□□□□□ -0.06
PPP4R3B-204ENST00000612688 MCM4P33991 863 aa14.69□□□□□ -0.06
PPP4R3B-204ENST00000612688 DZIP1LQ8IYY4 767 aaKnown RBP14.69□□□□□ -0.06
PPP4R3B-204ENST00000612688 AXIN2Q9Y2T1 843 aa14.69□□□□□ -0.06
PPP4R3B-204ENST00000612688 NPHP3Q7Z494 1330 aa14.69□□□□□ -0.06
PPP4R3B-204ENST00000612688 IQSEC2Q5JU85 1478 aa14.69□□□□□ -0.06
PPP4R3B-204ENST00000612688 TRIM27P14373 513 aa14.68□□□□□ -0.06
PPP4R3B-204ENST00000612688 KCNH5Q8NCM2 988 aa14.68□□□□□ -0.06
PPP4R3B-204ENST00000612688 MVPQ14764 893 aaKnown RBP14.68□□□□□ -0.06
PPP4R3B-204ENST00000612688 NBPF6Q5VWK0 638 aa14.68□□□□□ -0.06
PPP4R3B-204ENST00000612688 ZKSCAN2Q63HK3 967 aa14.68□□□□□ -0.06
PPP4R3B-204ENST00000612688 NBPF4Q96M43 638 aa14.68□□□□□ -0.06
PPP4R3B-204ENST00000612688 PHF23Q9BUL5 403 aaPredicted RBP14.68□□□□□ -0.06
PPP4R3B-204ENST00000612688 C22orf23Q9BZE7 217 aa14.68□□□□□ -0.06
PPP4R3B-204ENST00000612688 MTHFSDQ2M296 383 aaKnown RBP14.67□□□□□ -0.06
PPP4R3B-204ENST00000612688 KIAA1211Q6ZU35 1233 aa14.67□□□□□ -0.06
PPP4R3B-204ENST00000612688 NGEFQ8N5V2 710 aa14.67□□□□□ -0.06
PPP4R3B-204ENST00000612688 GRPEL1Q9HAV7 217 aa14.67□□□□□ -0.06
PPP4R3B-204ENST00000612688 PRDM10Q9NQV6 1147 aa14.67□□□□□ -0.06
PPP4R3B-204ENST00000612688 PEAK1Q9H792 1746 aa14.67□□□□□ -0.06
PPP4R3B-204ENST00000612688 CCDC27Q2M243 656 aa14.67□□□□□ -0.06
PPP4R3B-204ENST00000612688 TMEM57Q8N5G2 664 aa14.67□□□□□ -0.06
PPP4R3B-204ENST00000612688 CSB-PGBD3P0DP91 1061 aa14.67□□□□□ -0.06
PPP4R3B-204ENST00000612688 IP6K1Q92551 441 aa14.67□□□□□ -0.06
PPP4R3B-204ENST00000612688 FSD2A1L4K1 749 aa14.65□□□□□ -0.06
PPP4R3B-204ENST00000612688 PIP4K2BP78356 416 aa14.65□□□□□ -0.06
PPP4R3B-204ENST00000612688 KRT24Q2M2I5 525 aa14.65□□□□□ -0.06
PPP4R3B-204ENST00000612688 ARHGEF25Q86VW2 580 aa14.65□□□□□ -0.06
PPP4R3B-204ENST00000612688 ANKRD24Q8TF21 1146 aa14.65□□□□□ -0.06
PPP4R3B-204ENST00000612688 NLRP2Q9NX02 1062 aa14.65□□□□□ -0.06
PPP4R3B-204ENST00000612688 RTF1Q92541 710 aaKnown RBP14.64□□□□□ -0.07
PPP4R3B-204ENST00000612688 MRE11P49959 708 aa14.63□□□□□ -0.07
PPP4R3B-204ENST00000612688 TSPYL6Q8N831 410 aa14.63□□□□□ -0.07
PPP4R3B-204ENST00000612688 RBM42Q9BTD8 480 aaKnown RBP14.63□□□□□ -0.07
PPP4R3B-204ENST00000612688 APBB1O00213 710 aa14.63□□□□□ -0.07
PPP4R3B-204ENST00000612688 MBIPQ9NS73 344 aa14.62□□□□□ -0.07
PPP4R3B-204ENST00000612688 ZHX1Q9UKY1 873 aaPredicted RBP14.62□□□□□ -0.07
PPP4R3B-204ENST00000612688 IGSF1Q8N6C5 1336 aa14.62□□□□□ -0.07
PPP4R3B-204ENST00000612688 GAS2L3Q86XJ1 694 aa14.61□□□□□ -0.07
PPP4R3B-204ENST00000612688 SPATA31A3Q5VYP0 1347 aa14.61□□□□□ -0.07
PPP4R3B-204ENST00000612688 PRDM11Q9NQV5 511 aa14.61□□□□□ -0.07
PPP4R3B-204ENST00000612688 R3HCC1Q9Y3T6 440 aaKnown RBP14.6□□□□□ -0.07
PPP4R3B-204ENST00000612688 LMOD3Q0VAK6 560 aa14.6□□□□□ -0.07
PPP4R3B-204ENST00000612688 ANKRD45Q5TZF3 282 aa14.6□□□□□ -0.07
PPP4R3B-204ENST00000612688 STRN4Q9NRL3 753 aa14.6□□□□□ -0.07
PPP4R3B-204ENST00000612688 NECTIN2Q92692 538 aa14.59□□□□□ -0.07
PPP4R3B-204ENST00000612688 KIAA0232Q92628 1395 aa14.59□□□□□ -0.07
PPP4R3B-204ENST00000612688 ATF7IPQ6VMQ6 1270 aa14.59□□□□□ -0.07
PPP4R3B-204ENST00000612688 C8orf58Q8NAV2 365 aa14.59□□□□□ -0.07
PPP4R3B-204ENST00000612688 CD2BP2O95400 341 aaKnown RBP14.58□□□□□ -0.07
PPP4R3B-204ENST00000612688 GNAI1P63096 354 aa14.58□□□□□ -0.07
PPP4R3B-204ENST00000612688 DCCP43146 1447 aa14.58□□□□□ -0.07
PPP4R3B-204ENST00000612688 ARHGEF10O15013 1369 aa14.58□□□□□ -0.08
PPP4R3B-204ENST00000612688 HSCBQ8IWL3 235 aa14.58□□□□□ -0.08
PPP4R3B-204ENST00000612688 NCLP19338 710 aaKnown RBP14.58□□□□□ -0.08
PPP4R3B-204ENST00000612688 MPRIPQ6WCQ1 1025 aa14.57□□□□□ -0.08
PPP4R3B-204ENST00000612688 AEBP2Q6ZN18 517 aaPredicted RBP14.57□□□□□ -0.08
PPP4R3B-204ENST00000612688 PDCL3Q9H2J4 239 aa14.57□□□□□ -0.08
PPP4R3B-204ENST00000612688 XIRP1Q702N8 1843 aaKnown RBP14.57□□□□□ -0.08
PPP4R3B-204ENST00000612688 NCOA3Q9Y6Q9 1424 aa14.57□□□□□ -0.08
PPP4R3B-204ENST00000612688 ZNF530Q6P9A1 599 aaPredicted RBP14.57□□□□□ -0.08
PPP4R3B-204ENST00000612688 GAS2L2Q8NHY3 880 aa14.57□□□□□ -0.08
PPP4R3B-204ENST00000612688 HSP90AB1P08238 724 aaKnown RBP14.56□□□□□ -0.08
PPP4R3B-204ENST00000612688 CALD1Q05682 793 aaKnown RBP14.56□□□□□ -0.08
PPP4R3B-204ENST00000612688 CFAP44Q96MT7 982 aa14.56□□□□□ -0.08
PPP4R3B-204ENST00000612688 TSPYL4Q9UJ04 414 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms