RNA–Protein interactions for RNA: ENST00000612286.4

HOXA3-207, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HOXA3, Length 3,396 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-207ENST00000612286 ISY1Q9ULR0 285 aaKnown RBP17.17■□□□□ 0.34
HOXA3-207ENST00000612286 ATP7AQ04656 1500 aa17.16■□□□□ 0.34
HOXA3-207ENST00000612286 UNC5CLQ8IV45 518 aa17.16■□□□□ 0.34
HOXA3-207ENST00000612286 HSP90AB2PQ58FF8 381 aa17.16■□□□□ 0.34
HOXA3-207ENST00000612286 ZFYVE16Q7Z3T8 1539 aa17.16■□□□□ 0.34
HOXA3-207ENST00000612286 SPDYE4A6NLX3 237 aa17.15■□□□□ 0.34
HOXA3-207ENST00000612286 CFAP44Q96MT7 982 aa17.15■□□□□ 0.34
HOXA3-207ENST00000612286 CHMP4BQ9H444 224 aaKnown RBP17.15■□□□□ 0.34
HOXA3-207ENST00000612286 NCOA3Q9Y6Q9 1424 aa17.15■□□□□ 0.34
HOXA3-207ENST00000612286 IFT57Q9NWB7 429 aa17.15■□□□□ 0.34
HOXA3-207ENST00000612286 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.15■□□□□ 0.34
HOXA3-207ENST00000612286 TSPYL4Q9UJ04 414 aa17.15■□□□□ 0.34
HOXA3-207ENST00000612286 EIF2S2P20042 333 aaKnown RBP17.14■□□□□ 0.33
HOXA3-207ENST00000612286 PTMSP20962 102 aa17.14■□□□□ 0.33
HOXA3-207ENST00000612286 ZKSCAN5Q9Y2L8 839 aa17.14■□□□□ 0.33
HOXA3-207ENST00000612286 IL16Q14005 1332 aa17.14■□□□□ 0.33
HOXA3-207ENST00000612286 LRSAM1Q6UWE0 723 aa17.14■□□□□ 0.33
HOXA3-207ENST00000612286 TSPY26PQ9H489 355 aa17.14■□□□□ 0.33
HOXA3-207ENST00000612286 CNPY2Q9Y2B0 182 aa17.14■□□□□ 0.33
HOXA3-207ENST00000612286 FERMT3Q86UX7 667 aa17.13■□□□□ 0.33
HOXA3-207ENST00000612286 ANKRD44Q8N8A2 993 aa17.13■□□□□ 0.33
HOXA3-207ENST00000612286 PPFIA3O75145 1194 aa17.13■□□□□ 0.33
HOXA3-207ENST00000612286 PDE1AP54750 535 aa17.13■□□□□ 0.33
HOXA3-207ENST00000612286 NOL7Q9UMY1 257 aaKnown RBP17.13■□□□□ 0.33
HOXA3-207ENST00000612286 ZNF445P59923 1031 aa17.12■□□□□ 0.33
HOXA3-207ENST00000612286 GIMAP6Q6P9H5 292 aa17.12■□□□□ 0.33
HOXA3-207ENST00000612286 USP48Q86UV5 1035 aa17.12■□□□□ 0.33
HOXA3-207ENST00000612286 SPG7Q9UQ90 795 aa17.12■□□□□ 0.33
HOXA3-207ENST00000612286 ABCC4O15439 1325 aa17.12■□□□□ 0.33
HOXA3-207ENST00000612286 PNMA6EA0A0J9YXQ4 647 aa17.12■□□□□ 0.33
HOXA3-207ENST00000612286 ANXA1P04083 346 aa17.12■□□□□ 0.33
HOXA3-207ENST00000612286 FOSBP53539 338 aa17.12■□□□□ 0.33
HOXA3-207ENST00000612286 TCEANC2Q96MN5 208 aa17.12■□□□□ 0.33
HOXA3-207ENST00000612286 IL25Q9H293 177 aa17.12■□□□□ 0.33
HOXA3-207ENST00000612286 CCDC9Q9Y3X0 531 aaKnown RBP17.12■□□□□ 0.33
HOXA3-207ENST00000612286 VPS37CA5D8V6 355 aaPredicted RBP17.12■□□□□ 0.33
HOXA3-207ENST00000612286 TULP4Q9NRJ4 1543 aa17.12■□□□□ 0.33
HOXA3-207ENST00000612286 FAM173BQ6P4H8 233 aa17.11■□□□□ 0.33
HOXA3-207ENST00000612286 MROH2AA6NES4 1674 aa17.11■□□□□ 0.33
HOXA3-207ENST00000612286 IL13P35225 146 aa17.11■□□□□ 0.33
HOXA3-207ENST00000612286 CAMK4Q16566 473 aa17.11■□□□□ 0.33
HOXA3-207ENST00000612286 RTF1Q92541 710 aaKnown RBP17.11■□□□□ 0.33
HOXA3-207ENST00000612286 FBXW7Q969H0 707 aa17.11■□□□□ 0.33
HOXA3-207ENST00000612286 OS9Q13438 667 aaPredicted RBP17.11■□□□□ 0.33
HOXA3-207ENST00000612286 SBNO2Q9Y2G9 1366 aa17.11■□□□□ 0.33
HOXA3-207ENST00000612286 QRICH2Q9H0J4 1663 aa17.1■□□□□ 0.33
HOXA3-207ENST00000612286 KIAA2012Q0VF49 1180 aa17.09■□□□□ 0.33
HOXA3-207ENST00000612286 CWC27Q6UX04 472 aaKnown RBP17.09■□□□□ 0.33
HOXA3-207ENST00000612286 CCDC39Q9UFE4 941 aa17.09■□□□□ 0.33
HOXA3-207ENST00000612286 MCCP23508 829 aa17.09■□□□□ 0.33
HOXA3-207ENST00000612286 LRRFIP2Q9Y608 721 aaKnown RBP17.09■□□□□ 0.33
HOXA3-207ENST00000612286 HMMRO75330 724 aa17.08■□□□□ 0.33
HOXA3-207ENST00000612286 ADCY5O95622 1261 aa17.08■□□□□ 0.32
HOXA3-207ENST00000612286 SURF6O75683 361 aaKnown RBP17.07■□□□□ 0.32
HOXA3-207ENST00000612286 DRC7Q8IY82 874 aa17.07■□□□□ 0.32
HOXA3-207ENST00000612286 CWC22Q9HCG8 908 aaKnown RBP17.07■□□□□ 0.32
HOXA3-207ENST00000612286 ZCCHC11Q5TAX3 1644 aaKnown RBP17.07■□□□□ 0.32
HOXA3-207ENST00000612286 MYOM2P54296 1465 aa17.07■□□□□ 0.32
HOXA3-207ENST00000612286 MX1P20591 662 aa17.07■□□□□ 0.32
HOXA3-207ENST00000612286 KCNJ4P48050 445 aa17.06■□□□□ 0.32
HOXA3-207ENST00000612286 ARHGAP45Q92619 1136 aa17.06■□□□□ 0.32
HOXA3-207ENST00000612286 NUDT16Q96DE0 195 aaKnown RBP17.06■□□□□ 0.32
HOXA3-207ENST00000612286 STK31Q9BXU1 1019 aa17.06■□□□□ 0.32
HOXA3-207ENST00000612286 NSD2O96028 1365 aa17.06■□□□□ 0.32
HOXA3-207ENST00000612286 CHD1O14646 1710 aa17.06■□□□□ 0.32
HOXA3-207ENST00000612286 EIF4A2Q14240 407 aaKnown RBP17.06■□□□□ 0.32
HOXA3-207ENST00000612286 USHBP1Q8N6Y0 703 aa17.06■□□□□ 0.32
HOXA3-207ENST00000612286 KIF1BO60333 1816 aa17.06■□□□□ 0.32
HOXA3-207ENST00000612286 LMOD3Q0VAK6 560 aa17.06■□□□□ 0.32
HOXA3-207ENST00000612286 CCDC83Q8IWF9 413 aa17.06■□□□□ 0.32
HOXA3-207ENST00000612286 RPAP2Q8IXW5 612 aaPredicted RBP17.06■□□□□ 0.32
HOXA3-207ENST00000612286 NECAB1Q8N987 351 aa17.06■□□□□ 0.32
HOXA3-207ENST00000612286 ESYT1Q9BSJ8 1104 aa17.06■□□□□ 0.32
HOXA3-207ENST00000612286 LRRC7Q96NW7 1537 aa17.06■□□□□ 0.32
HOXA3-207ENST00000612286 CYP2E1P05181 493 aaPredicted RBP17.05■□□□□ 0.32
HOXA3-207ENST00000612286 LRRCC1Q9C099 1032 aa17.05■□□□□ 0.32
HOXA3-207ENST00000612286 TET3O43151 1660 aa17.05■□□□□ 0.32
HOXA3-207ENST00000612286 RTL1A6NKG5 1358 aa17.04■□□□□ 0.32
HOXA3-207ENST00000612286 ZNF592Q92610 1267 aa17.04■□□□□ 0.32
HOXA3-207ENST00000612286 YTHDC2Q9H6S0 1430 aaKnown RBP17.04■□□□□ 0.32
HOXA3-207ENST00000612286 STK3Q13188 491 aa17.04■□□□□ 0.32
HOXA3-207ENST00000612286 CKAP2LQ8IYA6 745 aa17.04■□□□□ 0.32
HOXA3-207ENST00000612286 SRCIN1Q9C0H9 1055 aa17.04■□□□□ 0.32
HOXA3-207ENST00000612286 GNAI2P04899 355 aa17.03■□□□□ 0.32
HOXA3-207ENST00000612286 CEBPZQ03701 1054 aaKnown RBP17.03■□□□□ 0.32
HOXA3-207ENST00000612286 NPHP1O15259 732 aa17.03■□□□□ 0.32
HOXA3-207ENST00000612286 RPGRIP1LQ68CZ1 1315 aa17.02■□□□□ 0.32
HOXA3-207ENST00000612286 MBD3O95983 291 aa17.02■□□□□ 0.32
HOXA3-207ENST00000612286 SASS6Q6UVJ0 657 aa17.02■□□□□ 0.32
HOXA3-207ENST00000612286 ASXL2Q76L83 1435 aa17.02■□□□□ 0.32
HOXA3-207ENST00000612286 RIMS2Q9UQ26 1411 aa17.02■□□□□ 0.32
HOXA3-207ENST00000612286 ZNF853P0CG23 659 aa17.02■□□□□ 0.32
HOXA3-207ENST00000612286 SYAP1Q96A49 352 aaPredicted RBP17.02■□□□□ 0.32
HOXA3-207ENST00000612286 PPRC1Q5VV67 1664 aaKnown RBP17.02■□□□□ 0.31
HOXA3-207ENST00000612286 DNM1Q05193 864 aaKnown RBP17.02■□□□□ 0.31
HOXA3-207ENST00000612286 MAPK8IP2Q13387 824 aaPredicted RBP17.02■□□□□ 0.31
HOXA3-207ENST00000612286 CHMLP26374 656 aa17.01■□□□□ 0.31
HOXA3-207ENST00000612286 AMPHP49418 695 aa17.01■□□□□ 0.31
HOXA3-207ENST00000612286 ZBTB9Q96C00 473 aa17.01■□□□□ 0.31
HOXA3-207ENST00000612286 TFIP11Q9UBB9 837 aaKnown RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms